Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31482
(340 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 27 2.6
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 27 2.6
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 27 2.6
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 2.6
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 2.6
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 27 2.6
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 27 2.6
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 27 2.6
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 27 2.6
AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical ... 26 6.0
Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical p... 26 7.9
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 242 PERIVAPSINTFNHLTND*AYTRPELRPLID 334
P+++ PSI+ + L+ND ++ P+L P D
Sbjct: 1994 PQQVRHPSISEMSQLSNDLTHSIPDLAPYQD 2024
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 242 PERIVAPSINTFNHLTND*AYTRPELRPLID 334
P+++ PSI+ + L+ND ++ P+L P D
Sbjct: 1973 PQQVRHPSISEMSQLSNDLTHSIPDLAPYQD 2003
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 242 PERIVAPSINTFNHLTND*AYTRPELRPLID 334
P+++ PSI+ + L+ND ++ P+L P D
Sbjct: 2029 PQQVRHPSISEMSQLSNDLTHSIPDLAPYQD 2059
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 242 PERIVAPSINTFNHLTND*AYTRPELRPLID 334
P+++ PSI+ + L+ND ++ P+L P D
Sbjct: 1983 PQQVRHPSISEMSQLSNDLTHSIPDLAPYQD 2013
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 242 PERIVAPSINTFNHLTND*AYTRPELRPLID 334
P+++ PSI+ + L+ND ++ P+L P D
Sbjct: 1983 PQQVRHPSISEMSQLSNDLTHSIPDLAPYQD 2013
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 242 PERIVAPSINTFNHLTND*AYTRPELRPLID 334
P+++ PSI+ + L+ND ++ P+L P D
Sbjct: 1994 PQQVRHPSISEMSQLSNDLTHSIPDLAPYQD 2024
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 242 PERIVAPSINTFNHLTND*AYTRPELRPLID 334
P+++ PSI+ + L+ND ++ P+L P D
Sbjct: 1983 PQQVRHPSISEMSQLSNDLTHSIPDLAPYQD 2013
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 242 PERIVAPSINTFNHLTND*AYTRPELRPLID 334
P+++ PSI+ + L+ND ++ P+L P D
Sbjct: 1973 PQQVRHPSISEMSQLSNDLTHSIPDLAPYQD 2003
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 242 PERIVAPSINTFNHLTND*AYTRPELRPLID 334
P+++ PSI+ + L+ND ++ P+L P D
Sbjct: 2029 PQQVRHPSISEMSQLSNDLTHSIPDLAPYQD 2059
>AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical
protein Y105C5B.4 protein.
Length = 330
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 3 DIVVNRSGGLT---IEKY*KKKSLNIFGSFIWLN*YYIII 113
+I +N +GG+ I+K I GSF++LN Y+II
Sbjct: 166 EIYINGNGGIIPRFIDKQMTSTFFKIGGSFLFLNCLYLII 205
>Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 63 LNIFGSFIWLN*YYIIIYKMLSGTSGRRLASV 158
L IFG F+ + Y ++Y +L + R +ASV
Sbjct: 124 LLIFGGFVQWHYMYTVVYGILGVAAERAIASV 155
>Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 63 LNIFGSFIWLN*YYIIIYKMLSGTSGRRLASV 158
L IFG F+ + Y ++Y +L + R +ASV
Sbjct: 124 LLIFGGFVQWHYMYTVVYGILGVAAERAIASV 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,282,893
Number of Sequences: 27780
Number of extensions: 131364
Number of successful extensions: 302
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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