Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31480
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    27   0.12 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    24   1.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   3.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.5  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 117 PAPTPKPTKQSDAKPKGKQTTFVNSLHEE 203
           P P P+PTK S  KP+  + T V    E+
Sbjct: 251 PTPKPRPTKVSRRKPRPPRPTQVEEEEEK 279


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 603 TNTRVLETIKTTENNKYFTLPRQ 535
           TNT++LE  K    NKY   PR+
Sbjct: 12  TNTQLLELEKEFHFNKYLCRPRR 34


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 603 TNTRVLETIKTTENNKYFTLPRQ 535
           TNT++LE  K    NKY   PR+
Sbjct: 143 TNTQLLELEKEFHFNKYLCRPRR 165


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 81  ATKVFTAPTSKRPAPTPKPTKQSDAKP 161
           A K    P    P P P+PT+ ++++P
Sbjct: 385 ALKSDEIPPEPVPTPEPQPTQTTESEP 411


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = +3

Query: 69  SAPV-ATKVFTAPTSK---RPAPTPKPTKQSDAKPKGKQTTFVNS 191
           S+P+ A KV  +PT+     P P  + T   DA  K   T F ++
Sbjct: 83  SSPILAEKVSVSPTTPPTPSPPPEERLTPSKDASSKRIXTAFTST 127


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 190 HYTKNTFNSRIHSNASCSMYLGTPNS 267
           HY+KNT+N + +  A     LG P+S
Sbjct: 345 HYSKNTYNEQGNKLADLYKSLG-PDS 369


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 190 HYTKNTFNSRIHSNASCSMYLGTPNS 267
           HY+KNT+N + +  A     LG P+S
Sbjct: 237 HYSKNTYNEQGNKLADLYKSLG-PDS 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,253
Number of Sequences: 336
Number of extensions: 2657
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)