Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31480
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114545-1|AAI14546.1| 1939|Homo sapiens myosin, heavy chain 1, ...    32   2.5  
AF111785-1|AAD29951.1| 1939|Homo sapiens myosin heavy chain IIx/...    32   2.5  
AF111783-1|AAD29949.1| 1939|Homo sapiens myosin heavy chain IIb ...    32   2.5  
U71267-1|AAD00179.1|  642|Homo sapiens potential transcriptional...    31   3.2  
X13988-1|CAA32167.1| 1940|Homo sapiens protein ( Human mRNA for ...    31   5.7  
AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain prot...    31   5.7  
AJ007421-1|CAB65124.1| 1272|Homo sapiens spalt-like zinc finger ...    30   7.5  
AF347021-1|AAK18311.1| 1300|Homo sapiens C2H2 zinc finger protei...    30   7.5  
DQ247958-1|ABB52637.1|  665|Homo sapiens envelope polyprotein pr...    30   9.9  
AK131104-1|BAC85154.1| 2760|Homo sapiens FLJ00341 protein protein.     30   9.9  

>BC114545-1|AAI14546.1| 1939|Homo sapiens myosin, heavy chain 1,
           skeletal muscle, adult protein.
          Length = 1939

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 159 PKGKQTTFVNSLHEEHIQQSNSFKR 233
           PK   T+F N L+E+H+ +SN+F++
Sbjct: 544 PKATDTSFKNKLYEQHLGKSNNFQK 568


>AF111785-1|AAD29951.1| 1939|Homo sapiens myosin heavy chain IIx/d
           protein.
          Length = 1939

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 159 PKGKQTTFVNSLHEEHIQQSNSFKR 233
           PK   T+F N L+E+H+ +SN+F++
Sbjct: 544 PKATDTSFKNKLYEQHLGKSNNFQK 568


>AF111783-1|AAD29949.1| 1939|Homo sapiens myosin heavy chain IIb
           protein.
          Length = 1939

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 159 PKGKQTTFVNSLHEEHIQQSNSFKR 233
           PK   T+F N L+E+H+ +SN+F++
Sbjct: 544 PKATDTSFKNKLYEQHLGKSNNFQK 568


>U71267-1|AAD00179.1|  642|Homo sapiens potential transcriptional
           repressor NOT4Hp protein.
          Length = 642

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = +3

Query: 3   PRQVRTYRALQEDGLPDAA---TELSAPVATKVFTAPTSKRPAPTPKPTKQSDAKPKGKQ 173
           P  +++ +AL E   P AA   T  SAP +T++     S  P P P       + P G Q
Sbjct: 561 PHWLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQ 620

Query: 174 TTF 182
           T F
Sbjct: 621 TAF 623


>X13988-1|CAA32167.1| 1940|Homo sapiens protein ( Human mRNA for
           embryonic myosin heavy chain. ).
          Length = 1940

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +3

Query: 159 PKGKQTTFVNSLHEEHIQQSNSFKR 233
           PK   T+F N L+++H+ +SN+F++
Sbjct: 542 PKATDTSFKNKLYDQHLGKSNNFQK 566


>AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain
           protein.
          Length = 1938

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +3

Query: 159 PKGKQTTFVNSLHEEHIQQSNSFKR 233
           PK   T+F N L+++H+ +SN+F++
Sbjct: 543 PKATDTSFKNKLYDQHLGKSNNFQK 567


>AJ007421-1|CAB65124.1| 1272|Homo sapiens spalt-like zinc finger
           protein protein.
          Length = 1272

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 48  PDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSDAKPKGKQT 176
           P    E SAP A     AP +  PAP P P   + ++P+   T
Sbjct: 274 PGGPAEPSAPAAPSAAPAPAA--PAPAPAPQSAASSQPQSAST 314


>AF347021-1|AAK18311.1| 1300|Homo sapiens C2H2 zinc finger protein
           protein.
          Length = 1300

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 48  PDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSDAKPKGKQT 176
           P    E SAP A     AP +  PAP P P   + ++P+   T
Sbjct: 302 PGGPAEPSAPAAPSAAPAPAA--PAPAPAPQSAASSQPQSAST 342


>DQ247958-1|ABB52637.1|  665|Homo sapiens envelope polyprotein
           protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 241 NMRRLNEFDC*MCSSCSEFTKVVCFPFGFASD 146
           ++R LN+ DC  C+      +VV FP G++SD
Sbjct: 259 SVRSLNKSDCYACAQGRPEAQVVPFPLGWSSD 290


>AK131104-1|BAC85154.1| 2760|Homo sapiens FLJ00341 protein protein.
          Length = 2760

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +3

Query: 51   DAATELSAPVATKVFTAPTSKRPAPTPKPTKQSDAKP 161
            +AAT  S P ++    +PTS +PAP PKP  +S A+P
Sbjct: 1301 EAATAGSPPPSSP--ESPTSPKPAP-PKPPTESPAEP 1334


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,240,741
Number of Sequences: 237096
Number of extensions: 1522902
Number of successful extensions: 9607
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9512
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)