Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31476
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.13 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    25   0.67 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +1

Query: 364 CIFYFF----IFLCQILKIKIRIS*RTHTYYF*CGLLTGLC 474
           CI+YF+    +F C  +   + +      YYF C L+  LC
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLC 297


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 182 CTKTAVHRTPKFVHLLGHNTWKTW 253
           C++     T K +H L HN  + W
Sbjct: 73  CSEKQKEMTKKVIHFLSHNKQQMW 96


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 335 LKMCSGNFSISYSLRFKLDFILTDYNFTMFSTYY 234
           +++  GN  +  + R KLDFI T         Y+
Sbjct: 428 IELLVGNLGMRRNFRKKLDFIFTFITLLTIGLYF 461


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 92   CSKFVIFFMVTVHFIYIFLYCY 27
            C K+ + + VTV  +Y+ L  Y
Sbjct: 1001 CLKYGVIYYVTVPSMYLLLVIY 1022


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 92   CSKFVIFFMVTVHFIYIFLYCY 27
            C K+ + + VTV  +Y+ L  Y
Sbjct: 1001 CLKYGVIYYVTVPSMYLLLVIY 1022


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,492
Number of Sequences: 336
Number of extensions: 3244
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)