Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31476
         (617 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0652 + 5627226-5628395,5628885-5629040,5629115-5629304,562...    28   5.2  
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848...    28   6.8  

>08_01_0652 +
           5627226-5628395,5628885-5629040,5629115-5629304,
           5629590-5629729
          Length = 551

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 188 KTAVHRTPKFVHLLGHNT 241
           +TA++R  +F+HL GH T
Sbjct: 137 RTAINRNARFIHLTGHRT 154


>07_03_0435 +
           18182657-18183509,18184477-18184574,18184663-18184833,
           18185524-18185624,18185702-18185837,18186007-18186057,
           18186202-18186489,18186610-18186844,18186924-18187204,
           18187336-18187557
          Length = 811

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 199 DSSLCARPKIDIELGVRG 146
           +S L ARP++D+E GVRG
Sbjct: 109 ESDLPARPRLDLERGVRG 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,240,386
Number of Sequences: 37544
Number of extensions: 278650
Number of successful extensions: 536
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)