Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31476
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical p...    37   0.010
Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical pr...    31   0.87 
U23168-12|AAC38812.2|  443|Caenorhabditis elegans Hypothetical p...    29   2.0  
AF016423-1|AAB65324.2|  410|Caenorhabditis elegans Hypothetical ...    29   2.7  
AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical...    28   6.1  
AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical...    27   8.1  
AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical...    27   8.1  

>U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical
           protein C33F10.2 protein.
          Length = 826

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +3

Query: 84  FAACTFFAKSHPGETCGSNGLPLTPSSISILGRAQRLLSIEHPNLCTYL 230
           F A    A+   G TC  NGLP+   +  +LGR   L S++H NL  YL
Sbjct: 7   FGAFILRAQEKDGRTC-INGLPVASPAKQMLGRFPYLQSLQHDNLSVYL 54


>Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical
           protein W07G4.3 protein.
          Length = 820

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 102 FAKSHPGETCGSNGLPLTPSSISILGRAQRLLSIEHPNLCTYLDII 239
           F K+ PGE      +     S ++  +AQ+L ++ HPN+ TYLD I
Sbjct: 38  FKKAEPGELAT---IFWDNRSSTLKQQAQKLKTMRHPNIITYLDSI 80


>U23168-12|AAC38812.2|  443|Caenorhabditis elegans Hypothetical
           protein B0228.9 protein.
          Length = 443

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 46  YIKCTVTMKKITNLLHARFSLRVTLVKLVEVMD 144
           Y KC V+  +I NL+HA FS    L +  E+ +
Sbjct: 365 YAKCVVSEVRIRNLVHADFSTTFLLSRANEIQE 397


>AF016423-1|AAB65324.2|  410|Caenorhabditis elegans Hypothetical
           protein F40A3.5 protein.
          Length = 410

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 147 PLTPSSISILGRAQRLLSIEHPNLCTYLDI 236
           P+   SIS+L  A RL  ++HPNL   L +
Sbjct: 135 PIVSKSISLLEDALRLSKLDHPNLIRLLAV 164


>AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical
           protein Y47D3A.30 protein.
          Length = 565

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 134 STSFTRVTLSEKRACSKFVIFFMVTVHFIYIFLYCYI 24
           S SF     S+  A  ++++FF +T H   +FLY Y+
Sbjct: 274 SLSFAFTFYSQNFALHRWIVFFNLTAH---VFLYAYL 307


>AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical
           protein Y37E3.17a protein.
          Length = 830

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = -1

Query: 245 STYYVQVSAQIWVFYGQQSL---CTS*D*YRTG--SKGQSITSTSFTRVTLSEKRAC 90
           ST+YV+ S   ++F G +SL       D Y+ G  ++G       F+R+  + KRAC
Sbjct: 278 STFYVRKSGDDYLFGGFESLEKTVIREDWYKKGVPTEGSKSIQADFSRLDDAYKRAC 334


>AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical
           protein Y37E3.17b protein.
          Length = 837

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = -1

Query: 245 STYYVQVSAQIWVFYGQQSL---CTS*D*YRTG--SKGQSITSTSFTRVTLSEKRAC 90
           ST+YV+ S   ++F G +SL       D Y+ G  ++G       F+R+  + KRAC
Sbjct: 285 STFYVRKSGDDYLFGGFESLEKTVIREDWYKKGVPTEGSKSIQADFSRLDDAYKRAC 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,067,880
Number of Sequences: 27780
Number of extensions: 278248
Number of successful extensions: 654
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)