Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31475
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82053-2|CAB04835.1|  365|Caenorhabditis elegans Hypothetical pr...   118   3e-27
AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical ...    39   0.004
AF067946-2|AAC17685.1|  223|Caenorhabditis elegans Nudix family ...    37   0.014
U55855-1|AAA98017.1|  188|Caenorhabditis elegans Nudix family pr...    36   0.033
Z68748-2|CAA92955.3|  374|Caenorhabditis elegans Hypothetical pr...    33   0.18 
AF305937-1|AAG37064.1|  348|Caenorhabditis elegans NADH pyrophos...    33   0.18 
Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical pr...    31   0.72 
DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping...    31   0.72 
AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical ...    31   0.72 
AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical ...    31   0.72 
U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U23484-4|AAC46768.2|  260|Caenorhabditis elegans Nudix family pr...    29   3.8  
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    29   3.8  
AL032625-2|CAB63351.1|  138|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z79753-7|CAB02085.2|  448|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>Z82053-2|CAB04835.1|  365|Caenorhabditis elegans Hypothetical
           protein T26E3.2 protein.
          Length = 365

 Score =  118 bits (285), Expect = 3e-27
 Identities = 58/110 (52%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
 Frame = +3

Query: 330 LGGNVTYVVACVIIN---EFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLE 500
           L  NV YV A +I+    +  EVL++QEAK+SC GKWY+PAGR+E GETI +A VREV E
Sbjct: 68  LHDNVNYVAAAIILRNQGDDTEVLLIQEAKKSCRGKWYMPAGRVEAGETIEEAVVREVKE 127

Query: 501 ETGLQCDLKTLLVVETAGGSWYRFVLTGEIIGGELKTPARADKESLQAKW 650
           ETG  CD+  LL ++  G  WYR+     I GG+LKT    D+ESL A+W
Sbjct: 128 ETGYSCDVVELLSLQVQGSGWYRYAFYCNITGGDLKT--EPDQESLAAEW 175


>AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical
           protein Y92H12BL.5 protein.
          Length = 150

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/46 (39%), Positives = 29/46 (63%)
 Frame = +3

Query: 387 VLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCDL 524
           VL++   K+   GKW +P G +EK E   +AA RE++EE G++  +
Sbjct: 41  VLLVSGGKDG--GKWVVPGGGIEKDECAEEAAHRELMEEAGVRATI 84


>AF067946-2|AAC17685.1|  223|Caenorhabditis elegans Nudix family
           protein 2 protein.
          Length = 223

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
 Frame = +3

Query: 291 GITPTTPSNFKPV-LGGNVTYVVACVIINEFNEVLMMQEAKESCAGKWYL--PAGRMEKG 461
           G+  +   N KPV    +   ++A V       ++++++ +  C GK  L  PAG ++ G
Sbjct: 58  GVWQSVHRNTKPVEASADGVSIIARVRKQGKLYIVLVKQYRIPC-GKLCLELPAGLIDAG 116

Query: 462 ETIVQAAVREVLEETG 509
           ET  QAA+RE+ EETG
Sbjct: 117 ETAQQAAIRELKEETG 132


>U55855-1|AAA98017.1|  188|Caenorhabditis elegans Nudix family
           protein 3 protein.
          Length = 188

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = +3

Query: 342 VTYVVACVIINEFNEVLMMQEA--KESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQ 515
           ++ ++  V ++  + VL+ + +    S  G+   P GRM+ GET  + A+RE  EE G+ 
Sbjct: 1   MSVLIPLVTVDGRDSVLLTKRSIHLRSHRGEVCFPGGRMDPGETTTETALRETFEEIGVN 60

Query: 516 CD 521
            +
Sbjct: 61  AE 62


>Z68748-2|CAA92955.3|  374|Caenorhabditis elegans Hypothetical
           protein F13H10.2 protein.
          Length = 374

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 363 VIINEFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCD 521
           +I +  NE  ++   + S  G +   AG    GE++ + A RE+ EE G++ D
Sbjct: 217 LITDPTNEHALLVRHRGSAGGVFTAVAGFAHSGESMAECARREIAEEVGIEVD 269


>AF305937-1|AAG37064.1|  348|Caenorhabditis elegans NADH
           pyrophosphatase protein.
          Length = 348

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 363 VIINEFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCD 521
           +I +  NE  ++   + S  G +   AG    GE++ + A RE+ EE G++ D
Sbjct: 191 LITDPTNEHALLVRHRGSAGGVFTAVAGFAHSGESMAECARREIAEEVGIEVD 243


>Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 357 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 509
           A ++  E + V+++Q       GK W  P G++ + E    AA+RE  EETG
Sbjct: 245 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 294


>Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 357 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 509
           A ++  E + V+++Q       GK W  P G++ + E    AA+RE  EETG
Sbjct: 268 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 317


>DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping
           protein protein.
          Length = 770

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 357 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 509
           A ++  E + V+++Q       GK W  P G++ + E    AA+RE  EETG
Sbjct: 229 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 278


>AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 357 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 509
           A ++  E + V+++Q       GK W  P G++ + E    AA+RE  EETG
Sbjct: 245 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 294


>AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 357 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 509
           A ++  E + V+++Q       GK W  P G++ + E    AA+RE  EETG
Sbjct: 268 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 317


>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = -1

Query: 652 IHLACNDSLSALAGVFN----SPPIISPVSTNLYQEPPAVSTTSKVLRSH*RPVSSN 494
           + ++  D  SA+  VF     SP + SP+S+NL+ +P   S T     S   PV+S+
Sbjct: 370 VDISSTDRTSAVNSVFKYDNLSPAVKSPISSNLW-KPTINSPTMSTTESTISPVASS 425


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = -1

Query: 652 IHLACNDSLSALAGVFN----SPPIISPVSTNLYQEPPAVSTTSKVLRSH*RPVSSN 494
           + ++  D  SA+  VF     SP + SP+S+NL+ +P   S T     S   PV+S+
Sbjct: 413 VDISSTDRTSAVNSVFKYDNLSPAVKSPISSNLW-KPTINSPTMSTTESTISPVASS 468


>U23484-4|AAC46768.2|  260|Caenorhabditis elegans Nudix family
           protein 6 protein.
          Length = 260

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 423 GKWYLPAGRMEKGETIVQAAVREVLEE 503
           G+W +P G ++ GE + Q   RE  EE
Sbjct: 141 GEWAIPGGMVDAGEHVSQTLRREFAEE 167


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -1

Query: 604 NSPPIISPVSTNLYQEPPAVSTTSKVLRSH*RPVSSNTSLTAACTIVSPFSILPAG 437
           ++P  +SP  +     PP  STT     +     SS  S TA+ T+ SP S  P G
Sbjct: 463 STPSFLSPTDSLTATTPPG-STTQAASTTESAMASSIESPTASVTVSSPKSTEPLG 517


>AL032625-2|CAB63351.1|  138|Caenorhabditis elegans Hypothetical
           protein Y37H9A.6 protein.
          Length = 138

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 429 WYLPAGRMEKGETIVQAAVREVLEETGLQCDLKTL 533
           W  P G ++ GE   QAA+RE  EE  +  +  T+
Sbjct: 32  WTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTI 66


>Z79753-7|CAB02085.2|  448|Caenorhabditis elegans Hypothetical
           protein F20G2.5 protein.
          Length = 448

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 222 LDSEGKDFCDFTIADQNSVAESQGITPTTPSNFK 323
           +DS      D  I DQN V +S    P TP+ F+
Sbjct: 223 VDSMETYIIDLNIVDQNVVGQSISFKPLTPTQFQ 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,549,299
Number of Sequences: 27780
Number of extensions: 276883
Number of successful extensions: 747
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)