Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31475
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          27   0.16 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      27   0.16 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.6  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   4.5  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   4.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -3

Query: 494 HFSYGSLYNCFSFFHSASR*IPFPSAAFFCFLHHKYFIELVYNNTSNDVGDVA 336
           HF +   +N   F  S S   P     F+ FLH +          SND+G+V+
Sbjct: 230 HFYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLERLSNDMGEVS 282



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 150 NVFNQ*LNIVYFFFALNHS 94
           N F + + + +F+F LNH+
Sbjct: 220 NYFTEDVGLNHFYFMLNHN 238


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -3

Query: 494 HFSYGSLYNCFSFFHSASR*IPFPSAAFFCFLHHKYFIELVYNNTSNDVGDVA 336
           HF +   +N   F  S S   P     F+ FLH +          SND+G+V+
Sbjct: 230 HFYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLERLSNDMGEVS 282



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 150 NVFNQ*LNIVYFFFALNHS 94
           N F + + + +F+F LNH+
Sbjct: 220 NYFTEDVGLNHFYFMLNHN 238


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 222 LDSEGKDFCDFTIADQNSVAESQGITPTTPSN 317
           +D  G  F  F + DQN+V     + P +P N
Sbjct: 322 MDENGLQF--FNLIDQNAVGCWNSLLPYSPEN 351



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 411 ESCAGKWYLPAGRMEKGETIVQA 479
           +SC   W L  G +  G T +QA
Sbjct: 136 DSCDRLWVLDTGTIGIGNTTIQA 158


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 423 GKWYLPAG 446
           GKWYLP+G
Sbjct: 238 GKWYLPSG 245


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 622 ALAGVFNSPPIISPVSTNL 566
           AL GV+ +  +++PVST L
Sbjct: 302 ALIGVYGNRELLTPVSTML 320


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 622 ALAGVFNSPPIISPVSTNL 566
           AL GV+ +  +++PVST L
Sbjct: 302 ALIGVYGNRELLTPVSTML 320


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 634 DSLSALAGVFNSPPIISPVSTNLYQEP 554
           +S +   G+F     +SPV+ NLY  P
Sbjct: 246 ESFTVHDGIFGMA--LSPVTNNLYYSP 270


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 434 FTCWQNGKRRNNCTGC 481
           FT  ++GK R+  TGC
Sbjct: 814 FTMTKSGKTRHQNTGC 829


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,786
Number of Sequences: 438
Number of extensions: 3754
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)