Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31473
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    29   0.044
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.31 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.3  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   3.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.9  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 28.7 bits (61), Expect = 0.044
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = +1

Query: 379 RSSPATPRVSLRSN*QSSAPHSTTSTRTAQAVCCQRS*NRA*SPWATASART--GKENST 552
           R SP++PR+S  S+ +S +P   T T+  + V   R  +   SP    + +T     N  
Sbjct: 64  RKSPSSPRISSPSSTKSGSPGFLTYTKADRDVDLFRGSSTPESPEHYYNQKTLQANNNDA 123

Query: 553 SNVFLLLSIPTI 588
           SN  L  SI  I
Sbjct: 124 SNGNLKFSIDNI 135


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 7    WCRSATRRWPQSFASNRTTRT--CEGSSQKRPTQSDLGSRGRWTPSP 141
            W  + T  W  +  + RTT T     S+  RPT ++  ++G   P P
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPP 1089


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 339 GAVPSRRAESPLCIVNICFR 280
           G V   RAE PL +V  C R
Sbjct: 518 GCVTEGRAEGPLLVVEYCSR 537


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 299 IHNGDSARRLGTAPDLDQPHHQR 367
           IHN D   R    P +  PH +R
Sbjct: 75  IHNVDCGDRTQLEPPISSPHCER 97


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 299 IHNGDSARRLGTAPDLDQPHHQR 367
           IHN D   R    P +  PH +R
Sbjct: 75  IHNVDCGDRTQLEPPISSPHCER 97



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 313 LCASAGNSS*PRSTAPSTKWRTRSSPAT 396
           L A   +S   RS  P+TK + R +PA+
Sbjct: 237 LLAGLQSSGSSRSHQPATKSKPRPAPAS 264


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 347 DQPHHQRSGEPDPHPRLQ 400
           D P+ ++S  P P P+L+
Sbjct: 219 DSPNSKKSATPSPPPQLE 236


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 215 VHSSFVLFKSAQLVFQRALQAHSD 144
           VH+   + KS    F  ALQA +D
Sbjct: 97  VHNLGTIAKSGTKAFMEALQAGAD 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,578
Number of Sequences: 336
Number of extensions: 3592
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)