Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31473
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 61 1e-10
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 52 5e-08
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 42 1e-04
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 38 0.001
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 31 0.11
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.15
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 30 0.25
SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces... 30 0.25
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.34
SPAC24C9.12c |||glycine hydroxymethyltransferase |Schizosaccharo... 30 0.34
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 28 1.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 1.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.4
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 27 3.1
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 27 3.1
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 27 3.1
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 27 3.1
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 26 4.1
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 26 5.5
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 26 5.5
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 26 5.5
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 26 5.5
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 25 7.2
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 25 9.5
SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|ch... 25 9.5
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 9.5
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 25 9.5
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 61.3 bits (142), Expect = 1e-10
Identities = 45/197 (22%), Positives = 91/197 (46%)
Frame = +3
Query: 63 ENLRRQFAEKANAVGPWIERQMDAVTAIGMGLQGSLEDQLRRLKEYEAGVYAYKPHIEEL 242
E++R FA++AN+ + + +T LQG DQL ++ + + + + +
Sbjct: 371 ESMRIAFADRANSFSKMLSTISNEIT----NLQGDWRDQLDHVEFLQEHLGPLEVELASV 426
Query: 243 ERIHQAVQEGMIFENRYSQYTMETLRVGWEQLLTSINRTINEVENQILTRDSKGITQEQL 422
+ ++ + I EN Y+ ++ E L + I I +EN++L R+ + +++++L
Sbjct: 427 KVLYDNCFQAGIEENDYTMFSYEDLEHEFGITANIIANKIKYLENELLEREKRTLSKQEL 486
Query: 423 TEFRASFNHFDKNRTGRLLPEELKSCLVSLGYSIGKDRQGELDFQRILAVVDPNNTGYVS 602
F HF+K ++ L E + L SLG + +G F R N+ V+
Sbjct: 487 DGITKVFRHFEKKKSNMLNEVEFYAALASLGL-VYDTEEGTALFHRA-----ANSEEGVT 540
Query: 603 FDSFLDFMTRESTDTDT 653
++ F + + E D D+
Sbjct: 541 YERFTEIVMEELEDRDS 557
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 52.4 bits (120), Expect = 5e-08
Identities = 28/85 (32%), Positives = 45/85 (52%)
Frame = +3
Query: 396 SKGITQEQLTEFRASFNHFDKNRTGRLLPEELKSCLVSLGYSIGKDRQGELDFQRILAVV 575
++ +T EQ+ EFR +F+ FD+++ G + EL + SLG S + Q ++ V
Sbjct: 3 TRNLTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQS-----PTAAELQDMINEV 57
Query: 576 DPNNTGYVSFDSFLDFMTRESTDTD 650
D + G + F FL M R+ DTD
Sbjct: 58 DADGNGTIDFTEFLTMMARKMKDTD 82
Score = 33.1 bits (72), Expect = 0.036
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 351 NRTINEVEN-QILTRDSKGITQEQLTEFRASFNHFDKNRTGRLLPEELKSCLVSLGYSIG 527
N TI+ E ++ R K E+ E R +F FDK+ G + EEL L SLG +
Sbjct: 62 NGTIDFTEFLTMMARKMKDTDNEE--EVREAFKVFDKDGNGYITVEELTHVLTSLGERLS 119
Query: 528 KDRQGELDFQRILAVVDPNNTGYVSFDSF 614
++ ++ + D + G ++++ F
Sbjct: 120 QEEVADM-----IREADTDGDGVINYEEF 143
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 41.5 bits (93), Expect = 1e-04
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +1
Query: 16 SATRRWPQSFASNRTTRTCEGSSQKRPTQSDLGSRGRWTPSPPSEWACRALWKTSCADLK 195
S+T + +S+ + + ++ T S L S + S A +L T+ A
Sbjct: 182 SSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATAT 241
Query: 196 STKLECTLTSHTSRNSNASTRLSRKA*SSKTDIHNTQWRLCASAGNSS*PRSTAPSTKWR 375
S+ + T++S T S+ ST + A ++ + L S+ SS P S+A ST
Sbjct: 242 SSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTAT 301
Query: 376 TRSS-PATPRVSLRSN*QSSAPHSTTST 456
+ SS P T S + SS P S+ S+
Sbjct: 302 SASSTPLTSVNSTTTTSASSTPLSSVSS 329
Score = 31.9 bits (69), Expect = 0.083
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +1
Query: 46 ASNRTTRTCEGSSQKRPTQSDLGSRGRWTP-SPPSEWACRALWKTSCADLKSTKL-ECTL 219
++N TT T S+ S + TP + + + T + ST +
Sbjct: 329 SANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASS 388
Query: 220 TSHTSRNSNASTRLSRKA*SSKTDIHNTQWRLCASAGNSS*PRSTAPSTKWRTRSS-PAT 396
T TS NS ST +S A S +NT L S+ +S+ P S+A ST + SS P +
Sbjct: 389 TPLTSANSTTSTSVSSTAPS-----YNTSSVLPTSSVSST-PLSSANSTTATSASSTPLS 442
Query: 397 PRVSLRSN*QSSAPHSTTSTRTA 465
S + SS P S+ ++ TA
Sbjct: 443 SVNSTTATSASSTPLSSVNSTTA 465
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +3
Query: 405 ITQEQLTEFRASFNHFDKNRTGRLLPEELKSCLVSLGYSIGKDRQGELDFQRILAVVDPN 584
IT+EQ + +F FD ++ + EL++ + +LG++ K + +IL D
Sbjct: 31 ITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKS-----EVLKILRDFDKT 85
Query: 585 NTGYVSFDSFLDFMTRESTDTD 650
GY+ + F+ MT + + D
Sbjct: 86 GKGYLQMEDFVRVMTEKIVERD 107
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 31.5 bits (68), Expect = 0.11
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 378 QILTRDSKGITQEQLTEFRASFNHFDKNRTGRLLPEELKSCLVSLGYSIGKDRQGEL 548
Q+L R + EF F FDK+ TG + EL+ L SLG + + EL
Sbjct: 62 QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDEL 118
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 31.1 bits (67), Expect = 0.15
Identities = 24/126 (19%), Positives = 63/126 (50%)
Frame = +1
Query: 172 KTSCADLKSTKLECTLTSHTSRNSNASTRLSRKA*SSKTDIHNTQWRLCASAGNSS*PRS 351
+TS + ++ +S +S +S+ S+ S+ + SSK+ ++ +S+ +SS S
Sbjct: 140 RTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSS 199
Query: 352 TAPSTKWRTRSSPATPRVSLRSN*QSSAPHSTTSTRTAQAVCCQRS*NRA*SPWATASAR 531
++ S+ ++ +SP++ + S + + S +T ++ ++ + + ++AS+
Sbjct: 200 SSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSSGAIVSNAKTASTDDSSSASSA 259
Query: 532 TGKENS 549
T +S
Sbjct: 260 TSSVSS 265
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 30.3 bits (65), Expect = 0.25
Identities = 13/58 (22%), Positives = 30/58 (51%)
Frame = +3
Query: 153 GLQGSLEDQLRRLKEYEAGVYAYKPHIEELERIHQAVQEGMIFENRYSQYTMETLRVG 326
GL + D +++ E +YA++ ++ + ++ GMI N+ T+E +++G
Sbjct: 273 GLINEVMDMRNFVQQLEQELYAFEDDYSRIQNDEELLKVGMIHLNKSENRTVEEMKIG 330
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 249 IHQAVQEGMIFENRYS--QYTMETLRVGWEQLLTSINRTINEVE 374
+ Q QE FE+ YS Q E L+VG L S NRT+ E++
Sbjct: 285 VQQLEQELYAFEDDYSRIQNDEELLKVGMIHLNKSENRTVEEMK 328
>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 30.3 bits (65), Expect = 0.25
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 273 MIFENRYSQYTMETLRVGWEQ--LLTSINRTI-NEVENQILTRDSKGITQEQLTEFRASF 443
++ EN YT E L+ WE+ LL S+ I ++ ++ + GI L R
Sbjct: 176 LLIENPLPSYTSEELKFNWEERRLLISMGFLILAGTDSYGISLPNLGIFTHILRNSRNDL 235
Query: 444 NHFDKNRTGRLLPEELKSCLVSLGYSIGKDRQGELDFQRILAVVDPNNTGYVSFDSFL 617
+++ K R R E ++S L + S+ ++ E F + D G V DSF+
Sbjct: 236 SNYLKKRPYR---EVIESSLYNRNVSVACKKKNEAFFGWKFRLCDAIGAGLV--DSFM 288
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.34
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Frame = +1
Query: 16 SATRRWPQSFASNRTTRTCEGSS-QKRPTQSDLGSRGRWTPSPPSEWACRALWKTSCADL 192
S++ P S +S ++ + SS + S + S ++ SP S + +S +
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSS---SSTISSSSSSP 350
Query: 193 KSTKLECTLTSHTSRNSNASTRLSRKA*SSKT--DIHNTQWRLCASAGNSS*PRSTAPST 366
S+ T +S S +S +ST S + SS T ++ R +S+ +SS S S+
Sbjct: 351 SSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSS 410
Query: 367 KWRTRSSPATPRVSLRSN*QSSAPHSTT 450
++ S+P + S S+ HS++
Sbjct: 411 SSKSSSAPVSSAFYHNSTSSRSSSHSSS 438
>SPAC24C9.12c |||glycine hydroxymethyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 29.9 bits (64), Expect = 0.34
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -2
Query: 245 FEFLDVWLVSVHSSFVLFKSAQLVFQRALQAHSDGGDGVHLPLDPR 108
FE+ DV + H S + A + F+R L+ H G+ ++ L+ +
Sbjct: 231 FEYADVVTTTTHKSLRGPRGAMIFFRRGLRKHDKKGNPIYYDLEDK 276
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 27.9 bits (59), Expect = 1.4
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 621 SPGTNRMTRSRYCWDRQQQEYVGSRVLLAC 532
SP + + +S YCW + + Y+ S + ++C
Sbjct: 206 SPNSKKKYKSLYCWRKIFEIYMDSDIFISC 235
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 435 ASFNHFDKNRTGRLLPEELKSCLVSLGYSIGKDRQGELD---FQRILAVVDPNNTGYV-S 602
+SFN F N GRLL +++ L++ G K + ++ QRIL +N + S
Sbjct: 567 SSFNEFASNEVGRLLESTIQNILLAKGTEKQKVKLIKVFNSLLQRILLNSKVSNESFEDS 626
Query: 603 FDSFLDFMTRESTDTDT 653
+ L+ +T DT
Sbjct: 627 LQASLNMLTERFYSDDT 643
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 2.4
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Frame = +1
Query: 205 LECTLTSHTSRNSNASTRLSRKA*SSKTDIHNT---QWRLCASAGNSS*PRSTAPSTKWR 375
+E T TS T+ +++AST + ++ SS + T L +++ + + S P+
Sbjct: 70 VEITSTSCTT-DTSASTPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSS 128
Query: 376 TRSSPATPRVSLRSN*QSSAPHSTTSTRTAQAVCCQRS*NRA*SPWATASARTGKENSTS 555
+ S+P TP V S +S P TST + +T+ TG +S S
Sbjct: 129 SLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLS 188
Query: 556 NVFLLLSIPTIPATCHSIRSWTL*PES 636
PT+P T S S + P S
Sbjct: 189 TPI----TPTVPPTSTSSTSIPIPPTS 211
Score = 25.8 bits (54), Expect = 5.5
Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 1/148 (0%)
Frame = +1
Query: 196 STKLECTLTSHTSRNSNASTRLSRKA*S-SKTDIHNTQWRLCASAGNSS*PRSTAPSTKW 372
S+ L +T S +ST + S S TD ++ +++ +S S P+
Sbjct: 127 SSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTS--TSIPPTGGS 184
Query: 373 RTRSSPATPRVSLRSN*QSSAPHSTTSTRTAQAVCCQRS*NRA*SPWATASARTGKENST 552
+ S+P TP V S +S P TST + + S + S TG +S
Sbjct: 185 SSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLP-TTSTSCTTSTSIPTGGSSSL 243
Query: 553 SNVFLLLSIPTIPATCHSIRSWTL*PES 636
S PT+P T S S + P S
Sbjct: 244 STPI----TPTVPPTSTSSTSIPIPPTS 267
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 328 GNSS*PRS-TAPSTKWRTRSSPATPRVSLRSN*QSSAPHSTTST 456
GNS+ P + T P T + S+P P S S SS+P +TST
Sbjct: 295 GNSTTPVTPTVPPTSTSSTSTPPPP-ASTSSTGTSSSPLPSTST 337
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 328 GNSS*PRS-TAPSTKWRTRSSPATPRVSLRSN*QSSAPHSTTST 456
GNS+ P + T P T + S+P P S S SS+P +TST
Sbjct: 349 GNSTTPVTPTVPPTSTSSTSTPPPP-ASTSSTGTSSSPLLSTST 391
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 165 SLEDQLRRLKEYEAGVYAYKPHIEELE 245
S+ED+ + + YE+ + +PH+ ELE
Sbjct: 731 SVEDKKKEIGHYESLIKEKQPHLSELE 757
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 320 RRL-GTAPDLDQPHHQRSGEPDPHPRLQGYHSGATDR-VPR 436
RRL G+ D D PHH +PHP + H T + VPR
Sbjct: 62 RRLKGSNSDSDSPHH----ASNPHPNSRQKHQHQTSKSVPR 98
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 528 KDRQGELDFQRILAVVDPNNTGYVSFDSFLDFM 626
++ + E ++ + V D +N+GY+ F D+M
Sbjct: 72 RETESEEEYIKAFRVFDKDNSGYIETAKFADYM 104
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 303 TMETLRVGWEQLLTSINRTINEVENQILTRDSKGITQEQLTEFRASF 443
T E R+ WE L SIN IN+V + + QE + RA +
Sbjct: 112 TPEYQRMQWEALKKSINGLINKVNKSNIRDIIPELFQENIIRGRALY 158
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 299 IHNGDSARRLGTAPDLDQP--HHQRS 370
IH+ DS+RR T+ L+QP +H S
Sbjct: 38 IHSADSSRRRSTSSQLNQPSNYHMHS 63
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 177 QLRRLKEYEAGVYAYKPHIEELERIHQAVQEGMIFENRYSQYTMETLRVGWE 332
+L EY G + + + LE ++ GM N Y T E +GW+
Sbjct: 422 ELANDSEYGLGSGVFSTNPKTLEFFSNNIEAGMCSLNNYHVVTHELPWIGWK 473
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1647
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 231 IEELERIHQAVQEGMIFENRYSQYTMETLRVGWEQLLTSINRTINEVE 374
+E L++IHQA+ + + R SQ+ L + W +T +N T ++E
Sbjct: 289 VEILQKIHQAIIQSPSQDWRSSQF-KNILGIWW---VTRLNATCKQIE 332
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 5.5
Identities = 19/89 (21%), Positives = 38/89 (42%)
Frame = +3
Query: 195 EYEAGVYAYKPHIEELERIHQAVQEGMIFENRYSQYTMETLRVGWEQLLTSINRTINEVE 374
E + V K I ELE + + + + + + +LR+ E L I+ N++
Sbjct: 345 ENDLTVKKLKRRISELEMAVKEYESEKSYSEKEYEEKISSLRIELEDKLAEIDMLRNKLL 404
Query: 375 NQILTRDSKGITQEQLTEFRASFNHFDKN 461
+ S E+L+++ AS ++N
Sbjct: 405 KEEHKHHSTSEKLEELSKYVASIQDKERN 433
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 137 DGVHLPLDPRSDCVGLFCELPSQVLVVLL 51
DG+H+ +DP SD E+P Q ++LL
Sbjct: 21 DGIHIYIDPGSDDSLKHPEVPEQPDLILL 49
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 25.4 bits (53), Expect = 7.2
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -3
Query: 508 ETKHDFNSSGSRRPVRFLSKWL 443
++K+DF S P+ F+++W+
Sbjct: 346 QSKYDFMKKFSESPIEFINEWI 367
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 25.0 bits (52), Expect = 9.5
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Frame = -2
Query: 293 ISVFEDHAFLDSLVDAFEFLDVWLVSVHSSFVLF-KSAQ----LVFQR-----ALQAHSD 144
I +F D+ +D L F LD+++ SV + V F KS Q L+F++ +L H
Sbjct: 429 IQIFNDNNDIDELTMTFSDLDIFMDSV--TLVSFGKSLQSPCSLIFKKLERIVSLFIHIP 486
Query: 143 GGDGVHLPL 117
GG+ + LPL
Sbjct: 487 GGE-ISLPL 494
>SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 411
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 242 EFLDVWLVSVHSSFVL 195
E L+ WLV +HS+F L
Sbjct: 170 EILNEWLVEIHSNFCL 185
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +2
Query: 344 LDQPHHQRSGEPDPHPRLQGYHSGATDRVPRLIQPLRQEPHRPSAARG 487
++ P Q+ + D H LQG + + P +P P AA G
Sbjct: 436 IETPEQQKVEKEDEHLNLQGSFIEESTKQPISSKPSTSSPDMTDAATG 483
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 25.0 bits (52), Expect = 9.5
Identities = 7/24 (29%), Positives = 18/24 (75%)
Frame = +2
Query: 572 CRSQQYRLRVIRFVPGLYDQRVDG 643
C+ ++Y+L+ + ++ LY+Q ++G
Sbjct: 840 CKLKEYQLKGLNWLANLYEQGING 863
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,790,394
Number of Sequences: 5004
Number of extensions: 59477
Number of successful extensions: 263
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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