Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31473
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      27   0.16 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.48 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   3.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.9  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
 Frame = +3

Query: 195 EYEAGVYAYKPHIEELERIHQAVQEGMIFENRYSQYTMETLRVGWEQLLTSINRTINEVE 374
           EY+  +  YKP +EE       + +     +    Y +E  R G  +  +S     +E E
Sbjct: 171 EYKPEIMEYKPDVEEQRYKQVEISQMTEPSSSTKSYVLEGPRNGKRKRKSSTIENESETE 230

Query: 375 NQILTRDSK-----GITQEQLTEFRASFNHFDKNRTGRL 476
           +   +  +K     G T E++   R   N  ++ RT  L
Sbjct: 231 SNASSTKTKMRRKSGATFEEIQNQRVMANVRERQRTQSL 269


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +3

Query: 372 ENQILTRDSKGITQEQLT-EFRAS--FNHFDKNRTGRLLPEELK 494
           +N +L   ++ ++Q+  + E+  S  F+H+D+N  G L  EEL+
Sbjct: 216 DNLLLYNHARLMSQDNHSKEYLVSIMFSHYDRNNNGNLEREELE 259


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 249 IHQAVQEGMIFENRYSQYTMETLR 320
           + QA+Q G+++EN+     ++T R
Sbjct: 187 VPQAIQFGVVYENKNGSVILDTAR 210


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 386 HPRLQGYHSGATDRVPRLIQPLRQE 460
           HP     H GA  +VP+  Q ++Q+
Sbjct: 20  HPHQHQQHYGAAVQVPQQTQSVQQQ 44


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 570  QQEYVGSRVLLACPCRCCSPGRLSTIST 487
            QQ  +  + LLA   +  SPG++ ++ T
Sbjct: 1011 QQHVLPGKTLLASQIKLVSPGQIKSLLT 1038



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/35 (22%), Positives = 15/35 (42%)
 Frame = +2

Query: 359 HQRSGEPDPHPRLQGYHSGATDRVPRLIQPLRQEP 463
           H+       H   +  HS   D   +++ P++ EP
Sbjct: 226 HESDNSDYSHTTDENRHSSTLDIDHKMLTPIKSEP 260


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 344 LDQPHHQRSGEPDPHPRLQGYHSGATDRVP 433
           + +P  + +  P P+PR+    S +T   P
Sbjct: 500 IHEPVVETNSSPSPNPRIASAPSSSTSSSP 529


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 555 GSRVLLACPCRCC 517
           G  V+++C C CC
Sbjct: 4   GRHVVMSCCCWCC 16


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 557 LEVEFSLPVLADAV 516
           LEV+ +LP+L D V
Sbjct: 115 LEVQLNLPILKDGV 128


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 557 LEVEFSLPVLADAV 516
           LEV+ +LP+L D V
Sbjct: 153 LEVQLNLPILKDGV 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,572
Number of Sequences: 438
Number of extensions: 4411
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)