Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31472
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.0  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 26  KFLVFFSTCVLAASAGLIDLDINILS 103
           KF++F STC+      +I+ D + L+
Sbjct: 177 KFMIFTSTCIYTNLLRIIEADFSKLN 202


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = +3

Query: 288 GRVRKSSNTTSLFSLDRCYPRATSRSSTRETILPSNSVLRQTQITTESHTAMPTTRAART 467
           GR  +S + +S  S +RC  R  S +  R+   P   +    + T +     PT+  A+ 
Sbjct: 801 GRRERSGSESSSIS-ERCSSRVESLTPERKMEPPGVPLNSTPRSTPDKREKSPTSDKAQE 859

Query: 468 SAG 476
           + G
Sbjct: 860 ADG 862


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 152 DYNTAVSLILLLEKQSSGSIIEDTVNN 232
           DYN    L  LL+++ S  I+   +NN
Sbjct: 270 DYNRLCHLCFLLDEKLSYIILTSFLNN 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,285
Number of Sequences: 336
Number of extensions: 3111
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)