Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31472
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49067-1|CAA88849.2| 376|Caenorhabditis elegans Hypothetical pr... 33 0.25
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 31 0.57
Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical pr... 31 0.75
AF040655-4|AAB95046.3| 125|Caenorhabditis elegans Hypothetical ... 31 0.75
AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium chann... 31 0.75
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 31 0.99
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 31 0.99
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical... 30 1.3
AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical... 30 1.3
AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical... 30 1.3
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 30 1.7
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.3
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 29 2.3
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.0
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.0
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 28 5.3
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 28 5.3
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z50794-4|CAC35819.1| 396|Caenorhabditis elegans Hypothetical pr... 28 7.0
U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis... 28 7.0
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 28 7.0
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 27 9.2
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 27 9.2
>Z49067-1|CAA88849.2| 376|Caenorhabditis elegans Hypothetical
protein C44F1.2 protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = -1
Query: 178 NQRNSRVVIGSGDSIDEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLHLDSLGS 5
N+R+ V+ SGD EP +S SGQ + K G GR AG++ KL ++ + S
Sbjct: 174 NKRHLEDVLASGDDASEPTEQS--SGQISEEPIKKRGRGRP-AGKKNKAKLEINFVES 228
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 31.5 bits (68), Expect = 0.57
Identities = 25/106 (23%), Positives = 40/106 (37%)
Frame = +3
Query: 144 PLPITTRLFL*FCCSRNNRVEASSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSNTTSL 323
PLP+TT + V+ S+ +P+T S TA PT + S+ T +
Sbjct: 363 PLPLTTTTEV-ISDVPTTTVQTSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTT 421
Query: 324 FSLDRCYPRATSRSSTRETILPSNSVLRQTQITTESHTAMPTTRAA 461
T S+T T + + + TT +H P + A
Sbjct: 422 QKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTHVGAPASSVA 467
>Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical
protein F59F3.1 protein.
Length = 1227
Score = 31.1 bits (67), Expect = 0.75
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +2
Query: 236 IRDGNRNVLEFAYKLWIGEGKEIVKHYFPVQFRQVLSESNVKIINKRDNLAIKLGAAADS 415
IR GNR + + IGEG E+ H+ + SE + KII + DN+ + DS
Sbjct: 542 IRKGNR-AITVNKLIKIGEGFEVRPHH-EKSSKATESEPS-KIIYEGDNVKLTCVFPLDS 598
Query: 416 DNDRIAYGDANDKSSE 463
D+ +++ N KSS+
Sbjct: 599 DDWSVSWRFENSKSSD 614
>AF040655-4|AAB95046.3| 125|Caenorhabditis elegans Hypothetical
protein T24E12.6 protein.
Length = 125
Score = 31.1 bits (67), Expect = 0.75
Identities = 23/93 (24%), Positives = 43/93 (46%)
Frame = +2
Query: 188 EKQSSGSIIEDTVNNLIRDGNRNVLEFAYKLWIGEGKEIVKHYFPVQFRQVLSESNVKII 367
E++ + + N+ + +R +LE K + K+I K YF F+ + S +++ I
Sbjct: 30 EQRDAKMTYDQNAVNIKKRIHRRLLE-VIKFHVKNQKKIQKDYF---FKYLQSGQHIERI 85
Query: 368 NKRDNLAIKLGAAADSDNDRIAYGDANDKSSEN 466
K + + G S +DR+ Y D K + N
Sbjct: 86 MKCEEIVESSGVPVLSKDDRMFYADYQKKKNGN 118
>AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium channel,
beta subunit protein1 protein.
Length = 526
Score = 31.1 bits (67), Expect = 0.75
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 285 SGRVRKSSNTTSLFSLDRCYPRATSRSSTRET 380
SG+ ++S++ T+L +LD PR+ SR ST T
Sbjct: 123 SGKFKQSTSATNLGALDNMMPRSGSRGSTPPT 154
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 30.7 bits (66), Expect = 0.99
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = +3
Query: 186 SRNNRVEASSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSNTTSLFSLDRCYPRATSRS 365
S + EASS + ST ++ T M ++PT + + +S TS+ + T +
Sbjct: 220 STPSSTEASSTVTSTTTARTTTTMIPTTPT---TTTIASTSTVTSIVT-STTVTSTTVPT 275
Query: 366 STRETILPSNSVLRQTQITTESHTAMPTTRAARTS 470
+T T +P+ + + T + T P+T T+
Sbjct: 276 TTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTT 310
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 30.7 bits (66), Expect = 0.99
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = +3
Query: 186 SRNNRVEASSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSNTTSLFSLDRCYPRATSRS 365
S + EASS + ST ++ T M ++PT + + +S TS+ + T +
Sbjct: 202 STPSSTEASSTVTSTTTARTTTTMIPTTPT---TTTIASTSTVTSIVT-STTVTSTTVPT 257
Query: 366 STRETILPSNSVLRQTQITTESHTAMPTTRAARTS 470
+T T +P+ + + T + T P+T T+
Sbjct: 258 TTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTT 292
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 264 SSPTNCGSGRVRKSSNTTSLFSLDRCYPRATSRSSTRETILPSNSVLRQTQITTESHTAM 443
++PT + ++ +T+ + P T+ + T T S + + T ITT + T
Sbjct: 285 TTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTA-STTTFKTTTITTTTQTTT 343
Query: 444 PTTRAART 467
PTT A T
Sbjct: 344 PTTTATTT 351
>AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical
protein Y18D10A.7c protein.
Length = 936
Score = 30.3 bits (65), Expect = 1.3
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Frame = +2
Query: 29 FLVFFSTCVLAASAGLIDLDINILSAPTRAETRLVDAIT-------TADYNTAVSLILLL 187
F + S +L ++ + + +L+ R E L ++T +DY TA + LLL
Sbjct: 435 FCYYSSAAILFIFLYVLTMFVAVLALQGRREEDLKHSVTGMKTIDLDSDYETASTRQLLL 494
Query: 188 EKQSSGSIIEDTVNNLIRDGNRNVLEFAYKLWIGEGKEIVKHYFPVQFRQVLSESNVKII 367
+ S S+ D NN + N +E K+ + + + +F Q+ +S S + I+
Sbjct: 495 KMGSRVSVKADEENN--NNNNEKSIENIQKI---DNRMWYQRFFEDQYAPFISNSKISIL 549
Query: 368 N 370
+
Sbjct: 550 S 550
>AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical
protein Y18D10A.7b protein.
Length = 797
Score = 30.3 bits (65), Expect = 1.3
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Frame = +2
Query: 29 FLVFFSTCVLAASAGLIDLDINILSAPTRAETRLVDAIT-------TADYNTAVSLILLL 187
F + S +L ++ + + +L+ R E L ++T +DY TA + LLL
Sbjct: 419 FCYYSSAAILFIFLYVLTMFVAVLALQGRREEDLKHSVTGMKTIDLDSDYETASTRQLLL 478
Query: 188 EKQSSGSIIEDTVNNLIRDGNRNVLEFAYKLWIGEGKEIVKHYFPVQFRQVLSESNVKII 367
+ S S+ D NN + N +E K+ + + + +F Q+ +S S + I+
Sbjct: 479 KMGSRVSVKADEENN--NNNNEKSIENIQKI---DNRMWYQRFFEDQYAPFISNSKISIL 533
Query: 368 N 370
+
Sbjct: 534 S 534
>AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical
protein Y18D10A.7a protein.
Length = 833
Score = 30.3 bits (65), Expect = 1.3
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Frame = +2
Query: 29 FLVFFSTCVLAASAGLIDLDINILSAPTRAETRLVDAIT-------TADYNTAVSLILLL 187
F + S +L ++ + + +L+ R E L ++T +DY TA + LLL
Sbjct: 435 FCYYSSAAILFIFLYVLTMFVAVLALQGRREEDLKHSVTGMKTIDLDSDYETASTRQLLL 494
Query: 188 EKQSSGSIIEDTVNNLIRDGNRNVLEFAYKLWIGEGKEIVKHYFPVQFRQVLSESNVKII 367
+ S S+ D NN + N +E K+ + + + +F Q+ +S S + I+
Sbjct: 495 KMGSRVSVKADEENN--NNNNEKSIENIQKI---DNRMWYQRFFEDQYAPFISNSKISIL 549
Query: 368 N 370
+
Sbjct: 550 S 550
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +3
Query: 156 TTRLFL*FCCSRNNRVEASSRIPSTISSETAIGM-F*SSPTNCGSGRVRKSSNTTSLFSL 332
TT +F +R R + R ST S+T + + S+PT+ S KSS + + +
Sbjct: 504 TTNIFTSTKVTREPREDDPHRDDSTTDSKTTTSLDYESTPTSTQSTASTKSSTSEGITTS 563
Query: 333 DRCYPRATSRSSTRETILPSNSVLRQTQITTES 431
++ R S S T + I T I T +
Sbjct: 564 EQTSHRMFSASKTPDIIPDEGDQSTNTTIKTST 596
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = -1
Query: 307 DDFLTLPD--PQFVGEL*NIPIAVSDEIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSI 134
DD LT P P F G+ P + D I + ++A ++ + + ++ +G GDS
Sbjct: 1319 DDNLTTPTQLPYFEGDF--WPNVIEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSG 1376
Query: 133 DEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLH 23
+ ++ ++ N ++NK AG G E KL+
Sbjct: 1377 KKKSSKNKKNNLKKNAKMNKKKAG-SITGNEVADKLY 1412
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = -1
Query: 307 DDFLTLPD--PQFVGEL*NIPIAVSDEIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSI 134
DD LT P P F G+ P + D I + ++A ++ + + ++ +G GDS
Sbjct: 1308 DDNLTTPTQLPYFEGDF--WPNVIEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSG 1365
Query: 133 DEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLH 23
+ ++ ++ N ++NK AG G E KL+
Sbjct: 1366 KKKSSKNKKNNLKKNAKMNKKKAG-SITGNEVADKLY 1401
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +3
Query: 207 ASSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSN-TTSLFSLDRCYPRATSRSSTRETI 383
++S + ST++S ++ ++PT+ S SS TTS + +S SST +
Sbjct: 454 STSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSST 513
Query: 384 LPS--NSVLRQTQITTESHTAMPTTRAARTSA 473
S +S TQ +T + + TT++ T++
Sbjct: 514 ASSSVSSTASSTQSSTSTQQSSTTTKSETTTS 545
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +3
Query: 207 ASSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSN-TTSLFSLDRCYPRATSRSSTRETI 383
++S + ST++S ++ ++PT+ S SS TTS + +S SST +
Sbjct: 454 STSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSST 513
Query: 384 LPS--NSVLRQTQITTESHTAMPTTRAARTSA 473
S +S TQ +T + + TT++ T++
Sbjct: 514 ASSSVSSTASSTQSSTSTQQSSTTTKSETTTS 545
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +3
Query: 222 PSTISSETAIGMF*SSPTNCGSGRVRKSSNTTSLFSLDRCYPRATSRSSTRETILPSNSV 401
P+T + I +F SS T+ GSG +KS S SL SR + TIL + V
Sbjct: 393 PATHRIQRFIALFNSSKTSDGSGEHKKSRMKRSRTSL------PASRFALPGTILQRDGV 446
Query: 402 LRQTQI 419
RQT +
Sbjct: 447 ARQTWV 452
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +3
Query: 222 PSTISSETAIGMF*SSPTNCGSGRVRKSSNTTSLFSLDRCYPRATSRSSTRETILPSNSV 401
P+T + I +F SS T+ GSG +KS S SL SR + TIL + V
Sbjct: 271 PATHRLQRFIALFNSSKTSDGSGEHKKSRMKRSRTSL------PASRFALPGTILQRDGV 324
Query: 402 LRQTQI 419
RQT +
Sbjct: 325 ARQTWV 330
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/87 (22%), Positives = 33/87 (37%)
Frame = +3
Query: 201 VEASSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSNTTSLFSLDRCYPRATSRSSTRET 380
V+ S+ +P+T S TA PT + S+ T + T S+T T
Sbjct: 500 VQTSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTAST 559
Query: 381 ILPSNSVLRQTQITTESHTAMPTTRAA 461
+ + + TT +H P + A
Sbjct: 560 TTKTTTSTPTSPQTTTTHVGAPASSVA 586
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/87 (22%), Positives = 33/87 (37%)
Frame = +3
Query: 201 VEASSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSNTTSLFSLDRCYPRATSRSSTRET 380
V+ S+ +P+T S TA PT + S+ T + T S+T T
Sbjct: 341 VQTSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTAST 400
Query: 381 ILPSNSVLRQTQITTESHTAMPTTRAA 461
+ + + TT +H P + A
Sbjct: 401 TTKTTTSTPTSPQTTTTHVGAPASSVA 427
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 290 EGKEIVK-HYFPVQFRQVLSESNVKIINKRDNLAIKL 397
E K IVK + + + +QVL ES + + N+ D +A+KL
Sbjct: 417 ENKTIVKENVYLSESKQVLLESEINLKNELDEMAVKL 453
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 290 EGKEIVK-HYFPVQFRQVLSESNVKIINKRDNLAIKL 397
E K IVK + + + +QVL ES + + N+ D +A+KL
Sbjct: 417 ENKTIVKENVYLSESKQVLLESEINLKNELDEMAVKL 453
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 294 VRKSSNTTSLFSLDRCYPRATSRSSTRETI--LPSNSVLRQTQITTESHTAMPTTRAART 467
++K+S T + P T+ ++T T LP+ + + T TTE T TT T
Sbjct: 194 LQKTSTTQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTT 253
Query: 468 S 470
+
Sbjct: 254 T 254
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 294 VRKSSNTTSLFSLDRCYPRATSRSSTRETI--LPSNSVLRQTQITTESHTAMPTTRAART 467
++K+S T + P T+ ++T T LP+ + + T TTE T TT T
Sbjct: 190 LQKTSTTQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTT 249
Query: 468 S 470
+
Sbjct: 250 T 250
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 294 VRKSSNTTSLFSLDRCYPRATSRSSTRETI--LPSNSVLRQTQITTESHTAMPTTRAART 467
++K+S T + P T+ ++T T LP+ + + T TTE T TT T
Sbjct: 133 LQKTSTTQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTT 192
Query: 468 S 470
+
Sbjct: 193 T 193
>Z50794-4|CAC35819.1| 396|Caenorhabditis elegans Hypothetical
protein F59F5.8 protein.
Length = 396
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +2
Query: 56 LAASAGLIDLDINILSAPTRAETRLVDAITTADYNTAVSLILLLEKQSSGSIIEDTVNNL 235
L ++ GLI +N++SA LV + +++ NT + + L KQ I +N
Sbjct: 56 LRSTTGLIPYYVNVISATVFKNMTLVCLVESSE-NTLIRYLYLFSKQLDQLRISQDLNRD 114
Query: 236 IRDGNRNV 259
+++ + +
Sbjct: 115 LKEVRKTI 122
>U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis
transmembrane conductanceregulator homolog protein 1
protein.
Length = 1247
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 200 SGSIIEDTVNNLIRDGNRNVLEFAYKLWIGEGKEIVKH 313
S ++++ + +L+ + RN L+ + +WIGE V+H
Sbjct: 1173 STKMMKEPIKSLVNEAIRNSLKQSTTIWIGEDFSDVEH 1210
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 124 RFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLHLDS 14
+F GR N + ++ R G EK++ L LDS
Sbjct: 26 KFELGRPAANTKIGAHRVRLVRTRGGNEKYRALRLDS 62
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 210 SSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSNTTSLFSLDRCYPRATSRSSTRET 380
SS P+T SS TA+ F +S N ++TS +L RC R+ R R T
Sbjct: 91 SSLHPATKSSTTALSSFSTSSANRSPANRPSLHSSTSPVTLQRC--RSPMRVPQRST 145
>Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical
protein T27F6.2 protein.
Length = 421
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 177 FCCSRNNRVEASSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSNTTS 320
+ C R V+ S+ P+T++ A +P+NC +GR+ TS
Sbjct: 281 YICKRQAGVQCSAAPPATVTPSPA------NPSNCNAGRLMSDGIITS 322
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 260 LEFAYKLWIGEGKEIVKHYFPVQFRQVLSESNV--KIINKRDNLAIKLGAAADSDNDRI 430
+ FA W+ +G+E V+ Y V+ V S + K++ D L I + A + RI
Sbjct: 615 VNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHEELIRI 673
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 294 VRKSSNT--TSLFSLDRCYPRATSRSSTRETILPSNSVLRQTQITTESHTA-MPTTRAAR 464
V SSNT TS S + ATSR+S T + S + T + + S T +P+ R +
Sbjct: 14 VSSSSNTATTSTSSSNTSQKWATSRTSRPVTNVTQVSAIHTTSMDSGSSTVQLPSPRGSL 73
Query: 465 TSAGS 479
T+A S
Sbjct: 74 TTAVS 78
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 294 VRKSSNT--TSLFSLDRCYPRATSRSSTRETILPSNSVLRQTQITTESHTA-MPTTRAAR 464
V SSNT TS S + ATSR+S T + S + T + + S T +P+ R +
Sbjct: 14 VSSSSNTATTSTSSSNTSQKWATSRTSRPVTNVTQVSAIHTTSMDSGSSTVQLPSPRGSL 73
Query: 465 TSAGS 479
T+A S
Sbjct: 74 TTAVS 78
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 210 SSRIPSTISSETAIGMF*SSPTNCGSGRVRKSSNTTSLFSLDRCYPRATSRSSTRET 380
SS P+T SS TA+ F +S N ++TS +L RC R+ R R T
Sbjct: 91 SSLHPATKSSTTALSSFSTSSANRSPANRPSLHSSTSPVTLQRC--RSPMRVPQRST 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,716,126
Number of Sequences: 27780
Number of extensions: 308860
Number of successful extensions: 1233
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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