Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31460
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.62 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    25   0.62 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 1   VNMAVQIYAVFCCLYNCLLG*MPDE 75
           + +A Q   +FC LY C+ G + D+
Sbjct: 244 MKIASQFVGIFCSLYFCIFGYIYDD 268


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 1   VNMAVQIYAVFCCLYNCLLG*MPDE 75
           + +A Q   +FC LY C+ G + D+
Sbjct: 69  MKIASQFVGIFCSLYFCIFGYIYDD 93


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 174 RVVYYQR-WQSVHLDKKMLL 230
           + VY  R WQ +HL+KK +L
Sbjct: 529 QTVYNHRPWQQLHLNKKQIL 548


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 318 VNY*PLFNAGFEPYSL 271
           +NY P  + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,788
Number of Sequences: 336
Number of extensions: 3442
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)