Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31456
         (348 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   3.2  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    22   5.7  
AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    22   7.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    21   9.9  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 106  TNCQ*L-CDVPYSVSVCKET*ILFIWLLALCLCVSK 210
            TNC    C+ P+SV     + ++ + +  LC C SK
Sbjct: 1147 TNCHSSGCERPFSVQKIPNSNLILLVVDVLCPCGSK 1182


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 348 FFFFFLRVRVNSIWSL 301
           ++F   RV+ NS+W L
Sbjct: 426 YYFIDFRVKPNSLWGL 441


>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 2   RKKPDWSKGKPGDQKVKE 55
           +K+PDW   +  D ++K+
Sbjct: 90  KKEPDWKMDQQDDNQLKQ 107


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 242 RICLNFTYISGLLTHRHSASSQI 174
           R C    Y +G+L  RHS S ++
Sbjct: 792 RDCEAAPYYTGILLVRHSQSDEV 814


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,222
Number of Sequences: 2352
Number of extensions: 6202
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)