Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31455
(638 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g23930.1 68416.m03006 expressed protein 29 2.6
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 29 3.4
At3g43160.1 68416.m04554 expressed protein merozoite surface pro... 29 3.4
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 28 6.0
At2g25350.1 68415.m03032 phox (PX) domain-containing protein wea... 28 6.0
At5g25070.1 68418.m02971 expressed protein 27 7.9
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 27 7.9
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 27 7.9
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 27 7.9
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 220 GDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 312
G IK +D++ + QLKE EWRK+R
Sbjct: 26 GRRHLIKERDEREKVMFLQLKEAEREWRKER 56
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 460 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE 609
D EKRQ L EAE+ R + S G +F + K SE F +S E
Sbjct: 502 DEPEKRQFLVEAEEIRDVLANETGTGSVLGISFDMSKVSE-FSISGRAFE 550
>At3g43160.1 68416.m04554 expressed protein merozoite surface
protein 2 (MSP-2), EMBL:PFU72951, Plasmodium falciparum
Length = 295
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 197 VDRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSR 355
+D+ + +S+ +TRSGR +++ +ST NS R SS K R
Sbjct: 91 IDQELKSSTGSENSTTRTRSGRGFIDYVLESSTGTENSSTRTAESSTRTKNGR 143
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 206 RSRVREIQNSSSVKTRSG-RTWMNS*RNTSTN---GANSGPRRRMSSNALKRSR 355
RS +R ++ S KT SG +++ ++ ST+ A+ PR+R SN+ +RSR
Sbjct: 209 RSPLRGSRSRSISKTNSGSKSYSGERKSRSTSQSSDASISPRKRRLSNSRRRSR 262
>At2g25350.1 68415.m03032 phox (PX) domain-containing protein weak
similarity to SP|Q9UTK5 Abnormal long morphology protein
1 (Sp8) {Schizosaccharomyces pombe}; contains Pfam
profile PF00787: PX domain
Length = 643
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +1
Query: 460 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 636
D+EE RQ+ E E K ++ D SKT N TI + E E + TK+QLE
Sbjct: 455 DMEELRQKTFEMELKLKSKEDGSSD-SKTSGNSTISESHE------LLQEMDATKQQLE 506
>At5g25070.1 68418.m02971 expressed protein
Length = 736
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 469 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 636
EKR EAEKK A + K+A + + KS N Q+E K +LE
Sbjct: 565 EKRMPELEAEKKVAASTRNFKEAGR----IAAEAKSLNLEKDKTQMETGKANAELE 616
>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
protein
Length = 558
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 466 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK 624
+EKR+R+EE E+K +KD N ++ + E SN +LE N K
Sbjct: 112 DEKRKRMEELEEKLVVNESLIKDLQLQVLN--LKTELEEARNSNVELELNNRK 162
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 193 ESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQ 309
E+R S+ + F K ++ +Q +EY+NEW K+
Sbjct: 234 ETRESVLQQERLSFTKERESYEGTFQKQ-REYLNEWEKK 271
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 193 ESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQ 309
E+R S+ + F K ++ +Q +EY+NEW K+
Sbjct: 247 ETRESVLQQERLSFTKERESYEGTFQKQ-REYLNEWEKK 284
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.129 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,544,970
Number of Sequences: 28952
Number of extensions: 138798
Number of successful extensions: 561
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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