Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31454
(664 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 384 e-107
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 376 e-105
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 376 e-104
SB_56| Best HMM Match : Actin (HMM E-Value=0) 375 e-104
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 357 6e-99
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 2e-49
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_54| Best HMM Match : Actin (HMM E-Value=0) 148 3e-36
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 136 2e-32
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 113 1e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 100 1e-21
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 3e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.001
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.1
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.5
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.9
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 2.6
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 29 2.6
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 3.4
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 4.5
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 5.9
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 7.8
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 7.8
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 7.8
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 7.8
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 384 bits (944), Expect = e-107
Identities = 177/181 (97%), Positives = 180/181 (99%)
Frame = +2
Query: 47 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 226
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 227 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 406
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 407 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 586
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 587 L 589
L
Sbjct: 181 L 181
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 585 DLAGRDLTDYLMKILTERGYSFTTTA 662
DLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTA 205
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 376 bits (926), Expect = e-105
Identities = 174/179 (97%), Positives = 178/179 (99%)
Frame = +2
Query: 53 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 232
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 233 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 412
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 413 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGL 589
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRL L
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 585 DLAGRDLTDYLMKILTERGYSFTTTA 662
DLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 179 DLAGRDLTDYLMKILTERGYSFTTTA 204
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 376 bits (924), Expect = e-104
Identities = 173/181 (95%), Positives = 179/181 (98%)
Frame = +2
Query: 47 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 226
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 227 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 406
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 407 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 586
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RL
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 587 L 589
L
Sbjct: 181 L 181
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 585 DLAGRDLTDYLMKILTERGYSFTTTA 662
DLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTA 205
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 375 bits (922), Expect = e-104
Identities = 173/179 (96%), Positives = 178/179 (99%)
Frame = +2
Query: 53 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 232
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 233 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 412
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 413 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGL 589
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRL L
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 585 DLAGRDLTDYLMKILTERGYSFTTTA 662
DLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 179 DLAGRDLTDYLMKILTERGYSFTTTA 204
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 357 bits (877), Expect = 6e-99
Identities = 165/173 (95%), Positives = 170/173 (98%), Gaps = 2/173 (1%)
Frame = +2
Query: 47 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 226
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 227 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 406
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 407 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 559
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 192 bits (468), Expect = 2e-49
Identities = 88/178 (49%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Frame = +2
Query: 65 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 238
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 239 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 415
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 416 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGL 589
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RL +
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDI 184
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 585 DLAGRDLTDYLMKILTERGYSFTTTA 662
D+AGRD+T YL+K++ RGY+F TA
Sbjct: 183 DIAGRDITKYLIKLMLLRGYAFNHTA 208
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 186 bits (452), Expect = 2e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +2
Query: 53 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 232
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 233 RGILTLKYPIEHGIITNWDDMEKIWHHTF 319
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 122 bits (293), Expect = 3e-28
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = +2
Query: 392 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 571
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 572 ILRLGL 589
I+RL L
Sbjct: 138 IIRLDL 143
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 585 DLAGRDLTDYLMKILTERGYSFTTTA 662
DLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 142 DLAGRDLTDYLMKILTERGYSFTTTA 167
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 148 bits (359), Expect = 3e-36
Identities = 67/97 (69%), Positives = 80/97 (82%)
Frame = +2
Query: 299 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 478
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 479 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGL 589
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+ L
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDL 2225
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +2
Query: 14 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 172
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 585 DLAGRDLTDYLMKILTERGYSFTTTA 662
DLAGRDLT YL +++TERGYSF +TA
Sbjct: 2224 DLAGRDLTHYLQRLVTERGYSFQSTA 2249
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 136 bits (329), Expect = 2e-32
Identities = 60/102 (58%), Positives = 80/102 (78%)
Frame = +2
Query: 347 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 526
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 527 SHTVPIYEGYALPHAILRLGLGWSRLDRLPHEDPHREGLLVH 652
SH+VPIYEG+A+PH+I+R + + R +EG H
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFH 227
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 113 bits (272), Expect = 1e-25
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +2
Query: 413 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGL 589
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRL L
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDL 59
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 585 DLAGRDLTDYLMKILTERGYSFTTTA 662
DLAGRDLTDYLMK++TERGYSFTTTA
Sbjct: 58 DLAGRDLTDYLMKLMTERGYSFTTTA 83
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 100 bits (239), Expect = 1e-21
Identities = 43/108 (39%), Positives = 72/108 (66%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 580
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVR 110
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +2
Query: 71 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 172
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.4 bits (135), Expect = 5e-09
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Frame = +2
Query: 62 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 241
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 242 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 415
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 416 MFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 577
+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVR 384
Query: 578 R 580
R
Sbjct: 385 R 385
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +2
Query: 8 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 187
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 188 --MGQKD-SYVGDEAQSKRGILTL 250
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2
Query: 458 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGLGWSRL 604
Q LSLYASG T G+ L SG + IYEG+ L H + L +G L
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHL 815
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2
Query: 185 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 364
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 494 TGIVLDSGDGVSHTVPI 544
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -1
Query: 169 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 53
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 8/49 (16%)
Frame = +2
Query: 452 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAI 574
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCI 88
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 302 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 481
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 482 SGRTTGIV 505
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 78 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 224
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 42 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 146
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 248 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 400
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 389 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 505
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 42 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 146
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 409 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 230
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 229 AL 224
++
Sbjct: 214 SV 215
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 33 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 146
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 528 PTPYPSTKVTLCPTPSSVWD 587
PTP+P+T V +P S+WD
Sbjct: 1373 PTPFPTTPVPPTTSPPSIWD 1392
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 3.4
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 534 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 382
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 381 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 217
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 577 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 479
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 392 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 541
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 377 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 505
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 27 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 152
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 42 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 146
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 174 PWWRGRPTMDGKTARGASSPAKPALHMPEP 85
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 42 SRCATTMLLR-L*STMAPACARPVSPAT 122
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -2
Query: 543 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 367
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 366 VSSTGCSSGATRSSL*KVW 310
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 42 SRCATTMLLR-L*STMAPACARPVSPAT 122
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 407 TQIMFETFNSPAMY-VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 583
T ++ ++ ++ V +A++ A + + SGD + +P YE LP + RL
Sbjct: 622 TLVLVDSSTKETLFSVPCKAIIGWTALSASIKVFYGSGDCLVVNIPTYESDDLPEIVRRL 681
Query: 584 G 586
G
Sbjct: 682 G 682
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 42 SRCATTMLLR-L*STMAPACARPVSPAT 122
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -2
Query: 570 AWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMIWVIFSLL 391
+W P T W +PSP+ T P ++T+W + +S++ +I L
Sbjct: 101 SWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSLYHIIGRLS 160
Query: 390 ALGLR 376
+ R
Sbjct: 161 GVHYR 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,902,302
Number of Sequences: 59808
Number of extensions: 456623
Number of successful extensions: 1661
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1656
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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