BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV31452 (656 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 383 e-107 X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 382 e-106 Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 381 e-106 Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 381 e-106 X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 381 e-106 X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 381 e-106 X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 381 e-106 U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 381 e-106 Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 365 e-101 U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 342 1e-94 U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 288 3e-78 AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 233 8e-62 Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 190 7e-49 J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 188 3e-48 J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 9e-48 J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 9e-48 J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 182 2e-46 AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 151 6e-37 AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 122 2e-28 Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 57 1e-08 U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 57 1e-08 U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 52 3e-07 U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.41 Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.54 U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.54 AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.7 AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.2 AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.7 AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 6.7 Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 8.9 Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 8.9 U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 8.9 U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 8.9 U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 8.9 >Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical protein T04C12.5 protein. Length = 376 Score = 383 bits (943), Expect = e-107 Identities = 177/181 (97%), Positives = 180/181 (99%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 415 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 416 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 595 TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180 Query: 596 L 598 L Sbjct: 181 L 181 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 180 DLAGRDLTDYLMKILTERGYS 200 >X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. Length = 376 Score = 382 bits (939), Expect = e-106 Identities = 175/181 (96%), Positives = 180/181 (99%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 415 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 416 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 595 TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180 Query: 596 L 598 L Sbjct: 181 L 181 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 180 DLAGRDLTDYLMKILTERGYS 200 >Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical protein T04C12.6 protein. Length = 376 Score = 381 bits (938), Expect = e-106 Identities = 175/181 (96%), Positives = 180/181 (99%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 415 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 416 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 595 TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180 Query: 596 L 598 L Sbjct: 181 L 181 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 180 DLAGRDLTDYLMKILTERGYS 200 >Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical protein T04C12.4 protein. Length = 376 Score = 381 bits (938), Expect = e-106 Identities = 175/181 (96%), Positives = 180/181 (99%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 415 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 416 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 595 TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180 Query: 596 L 598 L Sbjct: 181 L 181 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 180 DLAGRDLTDYLMKILTERGYS 200 >X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. Length = 376 Score = 381 bits (938), Expect = e-106 Identities = 175/181 (96%), Positives = 180/181 (99%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 415 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 416 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 595 TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180 Query: 596 L 598 L Sbjct: 181 L 181 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 180 DLAGRDLTDYLMKILTERGYS 200 >X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. Length = 375 Score = 381 bits (938), Expect = e-106 Identities = 175/181 (96%), Positives = 180/181 (99%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 415 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 416 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 595 TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180 Query: 596 L 598 L Sbjct: 181 L 181 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 180 DLAGRDLTDYLMKILTERGYS 200 >X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. Length = 376 Score = 381 bits (938), Expect = e-106 Identities = 175/181 (96%), Positives = 180/181 (99%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 415 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 416 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 595 TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180 Query: 596 L 598 L Sbjct: 181 L 181 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 180 DLAGRDLTDYLMKILTERGYS 200 >U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4, isoform a protein. Length = 376 Score = 381 bits (938), Expect = e-106 Identities = 175/181 (96%), Positives = 180/181 (99%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 415 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 416 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLG 595 TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180 Query: 596 L 598 L Sbjct: 181 L 181 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 180 DLAGRDLTDYLMKILTERGYS 200 >Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical protein T25C8.2 protein. Length = 375 Score = 365 bits (897), Expect = e-101 Identities = 166/179 (92%), Positives = 176/179 (98%) Frame = +2 Query: 62 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 241 ++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 242 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 421 RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121 Query: 422 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGL 598 IMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RL L Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180 Score = 45.2 bits (102), Expect = 4e-05 Identities = 19/21 (90%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDY+MKILTERGY+ Sbjct: 179 DLAGRDLTDYMMKILTERGYT 199 >U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4, isoform c protein. Length = 362 Score = 342 bits (841), Expect = 1e-94 Identities = 157/163 (96%), Positives = 162/163 (99%) Frame = +2 Query: 110 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 289 +AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64 Query: 290 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 469 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124 Query: 470 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGL 598 AVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRL L Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 167 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 166 DLAGRDLTDYLMKILTERGYS 186 >U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4, isoform b protein. Length = 332 Score = 288 bits (706), Expect = 3e-78 Identities = 132/137 (96%), Positives = 136/137 (99%) Frame = +2 Query: 188 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 367 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60 Query: 368 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 547 LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120 Query: 548 PIYEGYALPHAILRLGL 598 PIYEGYALPHAILRL L Sbjct: 121 PIYEGYALPHAILRLDL 137 Score = 47.2 bits (107), Expect = 1e-05 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 DLAGRDLTDYLMKILTERGYS Sbjct: 136 DLAGRDLTDYLMKILTERGYS 156 >AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical protein Y53F4B.22 protein. Length = 374 Score = 233 bits (570), Expect = 8e-62 Identities = 105/183 (57%), Positives = 141/183 (77%), Gaps = 4/183 (2%) Frame = +2 Query: 62 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 232 D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61 Query: 233 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 409 +S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121 Query: 410 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 589 + +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQR 181 Query: 590 LGL 598 + L Sbjct: 182 MDL 184 Score = 30.3 bits (65), Expect = 1.3 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGY 653 DLAGRD+T+YL +L GY Sbjct: 183 DLAGRDVTEYLRVLLRREGY 202 >Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical protein K07C5.1 protein. Length = 395 Score = 190 bits (463), Expect = 7e-49 Identities = 91/176 (51%), Positives = 123/176 (69%), Gaps = 3/176 (1%) Frame = +2 Query: 80 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 253 +VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68 Query: 254 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 430 + YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128 Query: 431 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGL 598 E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RL + Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDI 184 Score = 35.5 bits (78), Expect = 0.033 Identities = 13/21 (61%), Positives = 19/21 (90%) Frame = +3 Query: 594 DLAGRDLTDYLMKILTERGYS 656 D+AGRD+T YL+K+L +RGY+ Sbjct: 183 DIAGRDITKYLIKLLLQRGYN 203 >J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene IV, 5' end. ). Length = 86 Score = 188 bits (458), Expect = 3e-48 Identities = 85/86 (98%), Positives = 86/86 (100%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKI 313 SKRGILTLKYPIEHGI+TNWDDMEKI Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86 >J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene III, 5' end. ). Length = 86 Score = 186 bits (454), Expect = 9e-48 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKI 313 SKRGILTLKYPIEHGI+TNWDDMEKI Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86 >J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene I, 5' end. ). Length = 86 Score = 186 bits (454), Expect = 9e-48 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDMEKI 313 SKRGILTLKYPIEHGI+TNWDDMEKI Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86 >J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene II, 5' end. ). Length = 83 Score = 182 bits (444), Expect = 2e-46 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 235 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 236 SKRGILTLKYPIEHGIITNWDDM 304 SKRGILTLKYPIEHGI+TNWDDM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83 >AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex component protein 1 protein. Length = 425 Score = 151 bits (365), Expect = 6e-37 Identities = 82/197 (41%), Positives = 112/197 (56%), Gaps = 21/197 (10%) Frame = +2 Query: 56 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 199 M + A V+DNG+G K G+AG+ P+ + PS V Q V G+ Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60 Query: 200 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 376 D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLT Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120 Query: 377 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDG 532 E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDG Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180 Query: 533 VSHTVPIYEGYALPHAI 583 V+H +P+ +GY + I Sbjct: 181 VTHCIPVADGYVIGSCI 197 >AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical protein ZK616.4 protein. Length = 436 Score = 122 bits (294), Expect = 2e-28 Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 17/196 (8%) Frame = +2 Query: 65 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 238 D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+ Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68 Query: 239 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 373 KR G + P ++ G+I +W+ EKI H++ N L P EHPVL Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128 Query: 374 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 553 +E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+ Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPV 188 Query: 554 YEGYALPHAILRLGLG 601 ++GYA+ HA+++ +G Sbjct: 189 FDGYAVTHAVVKCPIG 204 >Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical protein C08B11.6 protein. Length = 418 Score = 57.2 bits (132), Expect = 1e-08 Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 4/185 (2%) Frame = +2 Query: 71 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 250 + ++ DNG K G ++PR V SIV + +H+ V + + +E K + Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57 Query: 251 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 430 ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115 Query: 431 ETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLGL 598 + F ++ + L S + +V+DSG + G + +++R+ + Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175 Query: 599 GWSRL 613 G L Sbjct: 176 GGKAL 180 >U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related protein-like protein. Length = 418 Score = 57.2 bits (132), Expect = 1e-08 Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 4/185 (2%) Frame = +2 Query: 71 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 250 + ++ DNG K G ++PR V SIV + +H+ V + + +E K + Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57 Query: 251 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 430 ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115 Query: 431 ETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLGL 598 + F ++ + L S + +V+DSG + G + +++R+ + Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175 Query: 599 GWSRL 613 G L Sbjct: 176 GGKAL 180 >U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical protein F42C5.9 protein. Length = 552 Score = 52.4 bits (120), Expect = 3e-07 Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 4/195 (2%) Frame = +2 Query: 80 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 253 L+++ GS +AG + P++ FP+I R + VG + R I Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240 Query: 254 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 433 +E I D+ K EL+V P ++ VLL+ P ++ QI E Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298 Query: 434 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLGLGWSRL 613 + + Q L LYA TTG+V+D G+ V + VP+ +GY + AI + G ++ Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQM 357 Query: 614 -DRLPHE-DPHREGL 652 D L H +GL Sbjct: 358 GDSLRASLSAHNKGL 372 >U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein C01G8.9a protein. Length = 1724 Score = 31.9 bits (69), Expect = 0.41 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 534 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 439 TP P SST+PVV P ++ T +Y+A L Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896 >Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical protein T10B10.1 protein. Length = 428 Score = 31.5 bits (68), Expect = 0.54 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +3 Query: 87 STMAPACARPVSPATTRPAPSSRP 158 +T AP PATTRPAP+S+P Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340 >U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related protein 2.4 protein. Length = 299 Score = 31.5 bits (68), Expect = 0.54 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%) Frame = +2 Query: 221 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 400 G + K TL + E + + D + K W T + L + + + PL+ K+ Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240 Query: 401 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 553 K T I + ET + + AI A L LY+ G+ +D GD + VPI Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294 >AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical protein T08D2.8 protein. Length = 388 Score = 29.9 bits (64), Expect = 1.7 Identities = 18/36 (50%), Positives = 20/36 (55%) Frame = +3 Query: 78 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 185 RL S +AP A P S A TR APS + VA RA Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266 >AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical protein F59E12.1 protein. Length = 811 Score = 29.5 bits (63), Expect = 2.2 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -3 Query: 201 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 91 P T TP RGRP + ++ P P P+PL Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372 >AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical protein C08F1.11 protein. Length = 279 Score = 27.9 bits (59), Expect = 6.7 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +2 Query: 110 KAGFAGDDAPRAVFPSIVGRPRHQG 184 KA + G D P+A F I+G ++G Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68 >AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical protein F54A3.1 protein. Length = 425 Score = 27.9 bits (59), Expect = 6.7 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 87 STMAPACARPVSPATTRPAPSSRPSWVALATRA 185 S +AP A P S A TR APS + VA RA Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270 >Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen protein. Length = 1759 Score = 27.5 bits (58), Expect = 8.9 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -1 Query: 251 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 168 GY GP P + GP P PG EG Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414 >Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen protein. Length = 1758 Score = 27.5 bits (58), Expect = 8.9 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -1 Query: 251 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 168 GY GP P + GP P PG EG Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413 >U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2, isoform a protein. Length = 1758 Score = 27.5 bits (58), Expect = 8.9 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -1 Query: 251 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 168 GY GP P + GP P PG EG Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413 >U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2, isoform b protein. Length = 1759 Score = 27.5 bits (58), Expect = 8.9 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -1 Query: 251 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 168 GY GP P + GP P PG EG Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414 >U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen protein. Length = 1795 Score = 27.5 bits (58), Expect = 8.9 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -1 Query: 251 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 168 GY GP P + GP P PG EG Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,379,369 Number of Sequences: 27780 Number of extensions: 312150 Number of successful extensions: 1507 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1500 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1465835342 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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