Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31443
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.87 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   6.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   6.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.1  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.1  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 336 RVPCTTTTRNTPRLLSLPIKSNLNINPSPNIKLSLR 443
           R+      R+T  +  +  K +L INP P+I  +LR
Sbjct: 601 RIMKAQALRDTSTMGYMAAKKHLEINPDPSILKNLR 636


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 704 PGSEGRGGPVRGPSDLAVACR 642
           PG+   G P  GP DL+V+ R
Sbjct: 229 PGTPPSGEPGNGPLDLSVSSR 249


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 614 PASPGIAPQPYRPQPNRWAP 673
           P++ G  P    P+P +W P
Sbjct: 419 PSADGSKPVQTTPKPGQWVP 438


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 130 RFLDILLRVQPDGRV 86
           RFL+  LR++P+GR+
Sbjct: 200 RFLNQYLRLKPEGRI 214


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 130 RFLDILLRVQPDGRV 86
           RFL+  LR++P+GR+
Sbjct: 218 RFLNQYLRLKPEGRI 232


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
 Frame = +2

Query: 596 SQYRVGPA--SPGIAPQP---YRPQPNRWAPVPGPLFPQNPDRSRATRSR 730
           + ++ GP    P I  QP    +P  N  A +P PL+P    +    R R
Sbjct: 197 NMHQQGPPHQQPPIQQQPNQGQQPPGNTAAALPSPLYPWMRSQFERKRGR 246


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
 Frame = +2

Query: 596 SQYRVGPA--SPGIAPQP---YRPQPNRWAPVPGPLFPQNPDRSRATRSR 730
           + ++ GP    P I  QP    +P  N  A +P PL+P    +    R R
Sbjct: 199 NMHQQGPPHQQPPIQQQPNQGQQPPGNTAAALPSPLYPWMRSQFERKRGR 248


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 249 KSVTAKDTVRRKWCGLQYPKRTDIIIHNSRV 341
           K +  K+ V + W   Q+P   D+I    RV
Sbjct: 467 KYLDKKNVVVQSWGASQWPDTPDLISDGYRV 497


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 302 PETNGYHNPQQQSPVYDNN 358
           P ++  H+P  Q+ +Y NN
Sbjct: 37  PPSDKLHHPIHQTVIYHNN 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,390
Number of Sequences: 336
Number of extensions: 3551
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)