Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31443
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 45 7e-05
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 45 7e-05
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 45 7e-05
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 45 7e-05
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 45 7e-05
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 40 0.003
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 40 0.003
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 37 0.014
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 37 0.014
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 34 0.13
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.29
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 32 0.51
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 31 0.68
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 0.89
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 31 1.2
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 31 1.2
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 30 2.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 2.1
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.7
U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical pr... 29 2.7
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 2.7
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 2.7
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 2.7
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 2.7
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 2.7
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 2.7
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 2.7
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 3.6
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 3.6
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 3.6
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 3.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.6
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 3.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 3.6
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 3.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.6
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 29 4.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 6.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 6.3
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 6.3
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 28 6.3
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 6.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 6.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 6.3
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 6.3
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 28 8.3
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 28 8.3
Y14065-1|CAA74392.1| 173|Caenorhabditis elegans catalase 2 prot... 28 8.3
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 28 8.3
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 28 8.3
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 28 8.3
AC006780-7|AAF60648.1| 394|Caenorhabditis elegans Hypothetical ... 28 8.3
AC006780-6|AAF60647.1| 401|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 50 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 108
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 109 DEPAYL-RSETLRLLKEQEHGSAG 131
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 50 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 108
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 109 DEPAYL-RSETLRLLKEQEHGSAG 131
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 17 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 196
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 197 DKPANLANSAVLRMLEEEERNRKG 268
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +2
Query: 62 PKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSAVLRML 241
P+ VH Q+NSP+GLYS++ E + + N + P +K + + SA L+ L
Sbjct: 2 PQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPN-------DLPAQEKHFDPSKSATLKYL 54
Query: 242 EEEERNRKG 268
+E ER G
Sbjct: 55 KEGERENFG 63
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +2
Query: 62 PKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSAVLRML 241
P+ VH Q+NSP+GLYS++ E + + N + P +K + + SA L+ L
Sbjct: 121 PQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPN-------DLPAQEKHFDPSKSATLKYL 173
Query: 242 EEEERNRKG 268
+E ER G
Sbjct: 174 KEGERENFG 182
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +2
Query: 47 EMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSA 226
E++ G + H Q+NSP+ LYS + E L + + G V P PA L S
Sbjct: 334 ELSPGAAVHHLQYNSPMNLYSSEATAEQLYQQTGAVPEGPV------PHDKSPAYL-TSE 386
Query: 227 VLRMLEEEERNR 262
+++EEE R R
Sbjct: 387 TRKLIEEEARGR 398
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +2
Query: 47 EMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSA 226
E++ G + H Q+NSP+ LYS + E L + + G V P PA L S
Sbjct: 334 ELSPGAAVHHLQYNSPMNLYSSEATAEQLYQQTGAVPEGPV------PHDKSPAYL-TSE 386
Query: 227 VLRMLEEEERNR 262
+++EEE R R
Sbjct: 387 TRKLIEEEARGR 398
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 572 VTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSRATRSRFP 736
V+ P Y + P S PQPY P P P P P P ++A ++P
Sbjct: 51 VSIQASGPVSYAIPPPSYAQPPQPYAQSPIAAVPPPPPPPPPQPAPAQAPAPKYP 105
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -1
Query: 681 PGTGAQRFGCGL*GCGAMPGDAGPTRYC--EGDKGDAVTPGPTG 556
PG QR G G G PG AGP G+ G A TPGP G
Sbjct: 208 PGKDGQR-GKGSAGAPGAPGKAGPAGPAGGPGNNGSAGTPGPAG 250
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = -1
Query: 693 GKRGPGTGAQRFGCGL*GCGAMPGDAGP--TRYCEGDKGDAVTPGPTG 556
G+ GPG G GC PG G T Y G G A PGP G
Sbjct: 172 GQGGPGEQGDAGRPGAAGCPGPPGPRGEPGTEYRPGQAGRAGPPGPRG 219
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 524 RQEQTGLSKLIPVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGP---LFP 694
++E+ + + V P P+ P Y P +P APQ Y P P P P L+
Sbjct: 302 KKEEPDVVYHMAVPPPPIPPPIQPPPYSYYPVAPAAAPQVYHYAPPPPPPPPHPQQGLYQ 361
Query: 695 QN 700
QN
Sbjct: 362 QN 363
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGP 685
P PG P +P + V P P I P P +P P+ A PGP
Sbjct: 122 PGKPGAPGLPGNPGKPPVQPCEP-ITPPPCKPCPDGPAGPPGP 163
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASP---GIAPQPYRPQP 658
PV PG P S Y GP P G PQP PQP
Sbjct: 174 PVQPGYNPRPASGQSYPSGPQVPPAYGQYPQPGYPQP 210
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 188 PTTDKPANLANSAVLRMLEEEERNRKGYSQKKVVWPPVPETNGYHNPQQQSPVYDN 355
PT ++A S V+ + E+ + ++K + + P+P N H + Q+P+ N
Sbjct: 718 PTVPTRNSIATSPVVSLCEDLKASKKSKKSRSISSSPIP-PNSLHEEETQTPLRQN 772
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 188 PTTDKPANLANSAVLRMLEEEERNRKGYSQKKVVWPPVPETNGYHNPQQQSPVYDN 355
PT ++A S V+ + E+ + ++K + + P+P N H + Q+P+ N
Sbjct: 718 PTVPTRNSIATSPVVSLCEDLKASKKSKKSRSISSSPIP-PNSLHEEETQTPLRQN 772
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = +2
Query: 539 GLSKLIPVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSR 715
G+ P G +P +P Y P PG P P P + P GP P P RSR
Sbjct: 154 GMPGAYPPPRGYPPAP-APGVYMPPPGMPGAYPPPRMPIGH--GPPGGPPMPGPPQRSR 209
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = +2
Query: 539 GLSKLIPVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSR 715
G+ P G +P +P Y P PG P P P + P GP P P RSR
Sbjct: 154 GMPGAYPPPRGYPPAP-APGVYMPPPGMPGAYPPPRMPIGH--GPPGGPPMPGPPQRSR 209
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGP----ASPGIAPQPYRPQPNRWAPVP 679
PVG GVT P+ P Y P A G AP P RP +AP P
Sbjct: 24 PVGFGVT--PIMPLPYGAPPPPVGAGVGYAPPPPRPYGATYAPPP 66
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 557 PVGPGVTASPLSP-SQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSRATRSRF 733
P P P++P S R P +P +P+P P +P+P P N RA R+R
Sbjct: 152 PRSPPPRRPPMTPPSPQRRPPRTPP-SPEPRNPPRTPPSPIPPPPPRLNSHDRRALRARR 210
Query: 734 PL 739
P+
Sbjct: 211 PM 212
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 554 IPVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLF 691
I V P A P Y P + P PY P+P P P P++
Sbjct: 71 IVVEPMPVAPPAPAPAYNPYPCATPPCPLPYIPEPVAPVPAPAPVY 116
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 566 PGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGP 685
P VTA+P P + + P +P P+P +P P++ +P P
Sbjct: 1805 PVVTAAPYVPQETQA-PIAPS-NPEPVQPNPSQTVSIPEP 1842
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPV-PGPLFPQNPD 706
P P + P S + P+ P + P+P QP+ P+ P P +P+
Sbjct: 562 PSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQPSSSGPIQTAPPSPSSPN 612
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQ 697
P PG P +P + P P I P P +P P A PG PQ
Sbjct: 122 PGRPGAAGLPGNPGRPPAQPCEP-ITPPPCKPCPQGPAGAPGAPGPQ 167
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 566 PGVTASPLSPSQYRVGPASPGIAP-QPYRPQPNRWAPVPG 682
PG P S R GPA P AP QP RP P+ PG
Sbjct: 232 PGPAGHPGSSGGGRPGPAGPKGAPGQPGRPGPDGHPGQPG 271
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQ 697
P PG P +P + P P I P P +P P A PG PQ
Sbjct: 122 PGRPGAAGLPGNPGRPPAQPCEP-ITPPPCKPCPQGPAGAPGAPGPQ 167
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQ 697
P PG P +P + P P I P P +P P A PG PQ
Sbjct: 122 PGRPGAAGLPGNPGRPPAQPCEP-ITPPPCKPCPQGPAGAPGAPGPQ 167
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQ 697
P PG P +P + P P I P P +P P A PG PQ
Sbjct: 122 PGRPGAAGLPGNPGRPPAQPCEP-ITPPPCKPCPQGPAGAPGAPGPQ 167
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
P PG+ +P P Q P P I P P +P P A PGP P
Sbjct: 120 PGAPGLPGNPGRPPQQ---PCEP-ITPPPCKPCPAGPAGAPGPAGP 161
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
P PG+ +P P Q P P I P P +P P A PGP P
Sbjct: 120 PGAPGLPGNPGRPPQQ---PCEP-ITPPPCKPCPAGPAGAPGPAGP 161
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
P PG+ +P P Q P P I P P +P P A PGP P
Sbjct: 120 PGAPGLPGNPGRPPQQ---PCEP-ITPPPCKPCPAGPAGAPGPAGP 161
>U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical
protein C04G6.4 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +2
Query: 542 LSKLIPVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
L K G V + PS V P + P P+ P+P +P P P P
Sbjct: 39 LQKTNTTGEDVKSKDAQPSVTPVPPPTFNPVPNPFAPRPKSVSPNPHPDVP 89
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAP--QPYRPQPNRWAPVPGPLFPQNPDRSRATRSR 730
P P SP+SPS P SP +P Y P ++P P +P S + S
Sbjct: 1598 PTSPAAGQSPVSPS---YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1654
Query: 731 FP 736
P
Sbjct: 1655 SP 1656
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAP--QPYRPQPNRWAPVPGPLFPQNPDRSRATRSR 730
P P SP+SPS P SP +P Y P ++P P +P S + S
Sbjct: 1605 PTSPAAGQSPVSPS---YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1661
Query: 731 FP 736
P
Sbjct: 1662 SP 1663
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
P PG+ +P P Q P P I P P +P P A PGP P
Sbjct: 120 PGAPGLPGNPGRPPQQ---PCEP-ITPPPCKPCPAGPAGAPGPAGP 161
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
P PG+ +P P Q P P I P P +P P A PGP P
Sbjct: 120 PGAPGLPGNPGRPPQQ---PCEP-ITPPPCKPCPAGPAGAPGPAGP 161
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPY-RPQPNRWAPVPGPLFP 694
P PS P P + P PY +P+PN P P+ P
Sbjct: 145 PPPPSMSNGAPYYPHMNPSPYYQPRPNYVTQPPAPIIP 182
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGP 685
P P +T P+ GP +PG P RP NR P+P P
Sbjct: 1285 PPPPQMTGPPIG---IYPGPPAPGNLPGSSRPSGNRKQPLPPP 1324
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 548 KLIPV--GPGVTASPLSP-SQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNPD 706
K+ PV P P SP ++ +PG P+ Y P P R PVP P+ PD
Sbjct: 89 KITPVWKAPSAFLKPWSPRKRFSSVETNPG-TPRIYLPPPPRPPPVPPLSPPERPD 143
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGP 685
P P +T P+ GP +PG P RP NR P+P P
Sbjct: 1285 PPPPQMTGPPIG---IYPGPPAPGNLPGSSRPSGNRKQPLPPP 1324
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPY-RPQPNRWAPVP---GPLFPQNP 703
PL S YR P+ P P+P P R AP+P GP P P
Sbjct: 750 PLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPY-RPQPNRWAPVP---GPLFPQNP 703
PL S YR P+ P P+P P R AP+P GP P P
Sbjct: 750 PLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRP---QPNRWAPVPGPLFP 694
P PG+ P P R GP G P P P P P P P +P
Sbjct: 308 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 702 GF*GKRGP-GTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTGIS 550
G+ G GP G G GL G G GP +GDKGD PG G+S
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGP----KGDKGDGGIPGAPGVS 434
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 702 GF*GKRG-PGTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G G+RG PG + G GL G PG G+KGDA PG G
Sbjct: 848 GLEGQRGFPGAPGLKGGDGLPGLSGQPG-------YPGEKGDAGLPGVPG 890
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 702 GF*GKRGP-GTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTGIS 550
G+ G GP G G GL G G GP +GDKGD PG G+S
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGP----KGDKGDGGIPGAPGVS 433
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 702 GF*GKRG-PGTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G G+RG PG + G GL G PG G+KGDA PG G
Sbjct: 847 GLEGQRGFPGAPGLKGGDGLPGLSGQPG-------YPGEKGDAGLPGVPG 889
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 702 GF*GKRGP-GTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTGIS 550
G+ G GP G G GL G G GP +GDKGD PG G+S
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGP----KGDKGDGGIPGAPGVS 433
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 702 GF*GKRG-PGTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G G+RG PG + G GL G PG G+KGDA PG G
Sbjct: 847 GLEGQRGFPGAPGLKGGDGLPGLSGQPG-------YPGEKGDAGLPGVPG 889
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 702 GF*GKRGP-GTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTGIS 550
G+ G GP G G GL G G GP +GDKGD PG G+S
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGP----KGDKGDGGIPGAPGVS 434
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 702 GF*GKRG-PGTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G G+RG PG + G GL G PG G+KGDA PG G
Sbjct: 848 GLEGQRGFPGAPGLKGGDGLPGLSGQPG-------YPGEKGDAGLPGVPG 890
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRP---QPNRWAPVPGPLFP 694
P PG+ P P R GP G P P P P P P P +P
Sbjct: 318 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 702 GF*GKRGP-GTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTGIS 550
G+ G GP G G GL G G GP +GDKGD PG G+S
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGP----KGDKGDGGIPGAPGVS 470
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 702 GF*GKRG-PGTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G G+RG PG + G GL G PG G+KGDA PG G
Sbjct: 884 GLEGQRGFPGAPGLKGGDGLPGLSGQPG-------YPGEKGDAGLPGVPG 926
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPY-RPQPNRWAPVP---GPLFPQNP 703
PL S YR P+ P P+P P R AP+P GP P P
Sbjct: 750 PLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNP 703
P GP + P PS GP+ P + P P P PN P P P P
Sbjct: 979 PSGPNGPSDPNKPSPN--GPSDP-VKPSPSGPSPN--GPSPNGPSPNGP 1022
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPY-RPQPNRWAPVP---GPLFPQNP 703
PL S YR P+ P P+P P R AP+P GP P P
Sbjct: 750 PLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -1
Query: 693 GKRGPGTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G GP A + G G PGDAGP G+ G PG G
Sbjct: 248 GPPGPAGNAGQAGYAQPGPAGPPGDAGPDG-APGNPGQPGAPGDAG 292
>Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical
protein F34D10.4 protein.
Length = 692
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -2
Query: 686 GGPVRGPSDLAVACRVAVRCPG-TPDPHGTARETRATQSLPAQRESA 549
G R S V R P P P T+RETR+T+ P++ SA
Sbjct: 367 GSSSRLESRSRATASVGARAPSRAPAPSSTSRETRSTRRSPSKGPSA 413
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPG 682
P GP P P PG+ +P + P +PVPG
Sbjct: 197 PDGPNGEPGPKGPPGQPGADGQPGMPGEPGKDAPQEGSPVPG 238
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 560 VGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPG 682
V P + +PL PS S AP P P P +P PG
Sbjct: 280 VAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYPG 320
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 560 VGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPG 682
V P + +PL PS S AP P P P +P PG
Sbjct: 282 VAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYPG 322
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 617 ASPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSRA 718
A P + QPY PQP + AP P + D S A
Sbjct: 17 ARPFVPGQPYTPQPEQAAPEPTEDWEAQADTSPA 50
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPV 676
P+GP + P +P QY P +APQ Y+P P + PV
Sbjct: 243 PMGPPM-GHPQAP-QYGQNYGQP-VAPQQYKPPPQQQPPV 279
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = +2
Query: 566 PGVTASPLSP-SQYRVGPASPGIA--PQPYRPQPNRWAP---VPGPLFPQNP 703
PG P P + + GP PG A P P P N AP PGP P+ P
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = +2
Query: 566 PGVTASPLSP-SQYRVGPASPGIA--PQPYRPQPNRWAP---VPGPLFPQNP 703
PG P P + + GP PG A P P P N AP PGP P+ P
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +2
Query: 566 PGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAP 673
P + P PS + P SP + P P + +W P
Sbjct: 857 PEPVSKPKEPSPKKAEPNSPVVPPTPVKNPVKKWKP 892
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = -1
Query: 693 GKRGPGTGAQRFGCGL*GCGAMPGDAGP-----TRYCEGDKGDAVTPGPTG 556
G+ GPG ++ G G PG GP T Y G G A PGP G
Sbjct: 172 GQGGPG---EQGDAGRPGAAGRPGPPGPRGEPGTEYRPGQAGRAGPPGPRG 219
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
P PG+ +P P Q P P I P P++P P PGP P
Sbjct: 120 PGAPGLPGNPGRPPQQ---PCEP-ITPPPWKPCPQGPPGPPGPPGP 161
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = +2
Query: 566 PGVTASPLSP-SQYRVGPASPGIA--PQPYRPQPNRWAP---VPGPLFPQNP 703
PG P P + + GP PG A P P P N AP PGP P+ P
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = +2
Query: 566 PGVTASPLSP-SQYRVGPASPGIA--PQPYRPQPNRWAP---VPGPLFPQNP 703
PG P P + + GP PG A P P P N AP PGP P+ P
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 584 PLSPSQYRVGPASPGIAPQPYRPQPNR 664
P P+ P SP AP P P PNR
Sbjct: 137 PPPPAAAAAAPISPKAAPTPQSPAPNR 163
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 693 GKRGP-GTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G RGP G G G G PG AG TR G PG G
Sbjct: 172 GNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPG 218
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 693 GKRGP-GTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G RGP G G G G PG AG TR G PG G
Sbjct: 172 GNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPG 218
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -1
Query: 693 GKRGP-GTGAQRFGCGL*GCGAMPGDAGPTRYCEGDKGDAVTPGPTG 556
G GP G + GL G MPG GP Y GD G PG G
Sbjct: 232 GPPGPMGARGEPGHRGLPGDNGMPGPMGPPGY-RGDNGRRGAPGLPG 277
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 644 RVAVRCPGTPDPHGTARET----RATQSLPAQRESAYSGQFALDDVPHRTLAETGDTE 483
++ V CP H T RE + ++ P +++ G DDV T TGD +
Sbjct: 368 QLPVNCPYRSRAHTTQREVAMAYESQENAPNSFPNSFRGYRTRDDVKESTFQTTGDVD 425
>Y14065-1|CAA74392.1| 173|Caenorhabditis elegans catalase 2
protein.
Length = 173
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 644 RVAVRCPGTPDPHGTARET----RATQSLPAQRESAYSGQFALDDVPHRTLAETGDTE 483
++ V CP H T RE + ++ P +++ G DDV T TGD +
Sbjct: 44 QLPVNCPYRSRAHTTQREVAMAYESQENAPNSFPNSFRGYRTRDDVKESTFQTTGDVD 101
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 702 GF*GKRG-PGTGAQRFGCGL*GCGAMPGDAGPT---RYCEGDKGDAVTPGPTG 556
G G+ G PG G G PGD GPT EG GD PGP G
Sbjct: 182 GIDGEDGAPGETGPTGPPGYRGGPGAPGDKGPTPEGDLKEGPPGDEGPPGPIG 234
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 702 GF*GKRG-PGTGAQRFGCGL*GCGAMPGDAGPT---RYCEGDKGDAVTPGPTG 556
G G+ G PG G G PGD GPT EG GD PGP G
Sbjct: 219 GIDGEDGAPGETGPTGPPGYRGGPGAPGDKGPTPEGDLKEGPPGDEGPPGPIG 271
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 702 GF*GKRG-PGTGAQRFGCGL*GCGAMPGDAGPT---RYCEGDKGDAVTPGPTG 556
G G+ G PG G G PGD GPT EG GD PGP G
Sbjct: 203 GIDGEDGAPGETGPTGPPGYRGGPGAPGDKGPTPEGDLKEGPPGDEGPPGPIG 255
>AC006780-7|AAF60648.1| 394|Caenorhabditis elegans Hypothetical
protein Y47D9A.1b protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -1
Query: 222 ELAKLAGLSVVGLLKSIPTDPLSRFF-RC--LLSVSLIFCCEYNPMG 91
+L +L+GLS + LL P+D + F RC VS+ + E NP+G
Sbjct: 37 QLCQLSGLSEILLLGFFPSDVFTDFISRCQQTYRVSIKYLEEPNPLG 83
>AC006780-6|AAF60647.1| 401|Caenorhabditis elegans Hypothetical
protein Y47D9A.1a protein.
Length = 401
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -1
Query: 222 ELAKLAGLSVVGLLKSIPTDPLSRFF-RC--LLSVSLIFCCEYNPMG 91
+L +L+GLS + LL P+D + F RC VS+ + E NP+G
Sbjct: 44 QLCQLSGLSEILLLGFFPSDVFTDFISRCQQTYRVSIKYLEEPNPLG 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,086,462
Number of Sequences: 27780
Number of extensions: 373866
Number of successful extensions: 2179
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2153
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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