Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31443
(762 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 36 0.039
At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein ... 35 0.068
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 34 0.12
At5g38560.1 68418.m04662 protein kinase family protein contains ... 33 0.21
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 31 1.1
At3g24550.1 68416.m03083 protein kinase family protein contains ... 31 1.1
At3g07520.1 68416.m00896 glutamate receptor family protein (GLR1... 31 1.1
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 31 1.1
At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99... 30 1.5
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 1.5
At1g04230.1 68414.m00413 expressed protein 30 1.5
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 30 1.9
At2g39050.1 68415.m04800 hydroxyproline-rich glycoprotein family... 30 1.9
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 30 1.9
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 30 1.9
At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (D... 29 2.6
At5g01280.1 68418.m00037 expressed protein 29 2.6
At4g28485.1 68417.m04075 hypothetical protein contains Pfam prof... 29 2.6
At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 29 3.4
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 29 3.4
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 29 3.4
At1g54450.1 68414.m06211 calcium-binding EF-hand family protein ... 29 3.4
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 29 3.4
At5g59110.1 68418.m07407 subtilisin-like serine protease-related... 29 4.5
At4g33660.1 68417.m04781 expressed protein 29 4.5
At2g26410.1 68415.m03169 calmodulin-binding family protein simil... 29 4.5
At4g38080.1 68417.m05378 hydroxyproline-rich glycoprotein family... 28 5.9
At1g66500.1 68414.m07554 zinc finger (C2H2-type) family protein ... 28 5.9
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 28 5.9
At5g59090.1 68418.m07403 subtilase family protein contains simil... 28 7.8
At4g34440.1 68417.m04894 protein kinase family protein contains ... 28 7.8
At1g79890.1 68414.m09334 helicase-related similar to CHL1 potent... 28 7.8
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 566 PGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRW--APVPGPLFPQNP 703
P + P PS Y P S PQPY PQP+ + P PG +P P
Sbjct: 200 PSTSGYPPIPSAYPPPPPSSAYPPQPYPPQPSYYPQGPYPGQ-YPPPP 246
>At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein /
YT521-B-like family protein low similarity to cleavage
and polyadenylation specificity factor 30 kDa subunit
[Bos taurus] GI:2327052; contains Pfam profiles PF00642:
Zinc finger C-x8-C-x5-C-x3-H type (and similar),
PF04146: YT521-B-like family; supporting cDNA
gi|24415581|gb|AY140901.1|
Length = 678
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 560 VGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWA-----PVPGPLFPQNP 703
+GPG A P P Y P G+ P+P+ P R+ PVPG +FP P
Sbjct: 519 MGPG-DAFPYGPGGYNGMPDPFGMGPRPFGPYGPRFGGDFRGPVPGMMFPGRP 570
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSRAT 721
P+ PG + P+ PS GP SP +P P P P+ GP P +P S T
Sbjct: 570 PISPGQNSPPIIPSPPFTGP-SPPSSPSPPLPPVIPSPPIVGPT-PSSPPPSTPT 622
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 557 PVGPGVTASP-LSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNP 703
P P ++ SP ++ P SPG P P P P+ +P+P P P P
Sbjct: 520 PPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPS--SPIPSPPTPSTP 567
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNP 703
P P SP SPS + P+ P P P P + P PG P +P
Sbjct: 440 PTTPSPGGSPPSPS---IVPSPPSTTPSPGSPPTSPTTPTPGGSPPSSP 485
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +2
Query: 557 PVGPGVTASPLSP--SQYRVGPASPGIAPQPYRPQPNRWAPVPGPLF 691
P PG SP SP S P +P P P P N +P P F
Sbjct: 540 PTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPSPPF 586
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 563 GPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPL 688
GP +SP SP V P+ P + P P P P+ P PG L
Sbjct: 588 GPSPPSSP-SPPLPPVIPSPPIVGPTPSSPPPS--TPTPGTL 626
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVG--PASPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSRATRSR 730
P P T P PS G P+ PG P P +P P+ P P P S + S
Sbjct: 125 PPAPTTTNPPPKPSPSPPGETPSPPGETPSPPKPSPSTPTPTTTTSPPPPPATSASPPSS 184
Query: 731 FPLNLST 751
P + ST
Sbjct: 185 NPTDPST 191
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 554 IPVGPGVTASPLSPSQYRVGPAS---PGIAPQPYRPQPNRWAPVPGPLFPQNPDRSRATR 724
+P P + PL PS P + P + P P +P P +P P P P P T
Sbjct: 1075 LPPSPPPPSPPLPPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSPPPPPPPPSQSLTT 1134
Query: 725 SRFPLNLSTH 754
L++++H
Sbjct: 1135 Q---LSIASH 1141
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 578 ASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPV-PGPLFPQNPDRSRATRS 727
+SPL PS + P SP + P PQP+ AP+ P P P P R+ S
Sbjct: 57 SSPLPPS---LPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPSNPRSPPS 104
>At3g07520.1 68416.m00896 glutamate receptor family protein (GLR1.4)
plant glutamate receptor family, PMID:11379626
Length = 861
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -1
Query: 240 NILRTAELAKLAGLSVVGLLKSIP 169
++ R AE+AKL GLSV LL++IP
Sbjct: 337 SLARAAEVAKLPGLSVYDLLEAIP 360
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 600 STVWVRRPRASHRNPTGHSQIAGPPYRAPSSLRTR 704
S W+R R +RNP +A P PSS RT+
Sbjct: 67 SQTWLRSVRGPNRNPNSSGDVAMGPPPPPSSKRTQ 101
>At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 489
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 566 PGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGP 685
P +P S Y + G A QP P P +AP P P
Sbjct: 50 PAPVPAPSPASSYGPQYSQEGYASQPNNPPPPTYAPAPSP 89
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 566 PGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNP 703
P V +SP P Y P P +P P P P +P P P+F P
Sbjct: 561 PPVYSSPPPPHVY--SPPPPVASPPPPSPPPPVHSPPPPPVFSPPP 604
>At1g04230.1 68414.m00413 expressed protein
Length = 325
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 155 DNGSVGIDFNNPTTDKPANLANSAVLRMLEEEERNRKGYSQKKVVWPPVPETNGYHNPQQ 334
D ++ + +T +P + A+ + +ERN+K YS +V+ PP P + +Q
Sbjct: 209 DEADADDEWTDKSTKEPVSSASGRATSSMSSDERNQKPYS-TRVLMPP-PRSRFASTSRQ 266
Query: 335 QSPVYDN 355
S V N
Sbjct: 267 YSSVKRN 273
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +2
Query: 557 PVGPGVT-ASP-LSPSQYRVGPASPGIAP--QPYRPQPNRWAPVPGPLFPQNPDRSRATR 724
P PG + SP SP+ P+SPG +P Y P ++P P +P S +
Sbjct: 1561 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1620
Query: 725 SRFPLNLS 748
S P + S
Sbjct: 1621 SYSPTSPS 1628
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 557 PVGPGV--TASPLSPSQYRVGPASPGIAPQPYRPQPN-RWAPVPGPLFPQNP 703
P PG T+ SP+ GP SP PQ + P+ ++P L P +P
Sbjct: 1701 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP 1752
>At2g39050.1 68415.m04800 hydroxyproline-rich glycoprotein family
protein contains QXW lectin repeat domain, Pfam:PF00652
Length = 317
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 581 SPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLF 691
+P +P+ YR AP PYR +P P P P F
Sbjct: 52 TPQAPAPYRSETQFEPHAPPPYRSEPYFETPAPPPSF 88
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +2
Query: 566 PGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLF-----PQNPDRSRATRSR 730
P T P+S +Q P +P A P P + APV P PQ+P S T S
Sbjct: 54 PTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSP 113
Query: 731 FPLN 742
P++
Sbjct: 114 PPVS 117
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
P P +A +SP PA P P P P +P P P P
Sbjct: 101 PQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASP 146
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 560 VGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
V P + P +P+ PASP P P P P +P P P+ P
Sbjct: 111 VSPPPVSPPPAPTSPPPTPASPP--PAPASPPPAPASPPPAPVSP 153
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = +2
Query: 527 QEQTG-LSKLIPVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAP---VPGPLFP 694
Q+ TG P P P P+Q G P QP RPQ AP G P
Sbjct: 358 QQPTGRFDPQSPNQPPSAPRPQFPNQQPTGRFDPQFPSQPPRPQFPNQAPNQQSTGRFNP 417
Query: 695 QNPD-RSRATRSRFP 736
Q P+ R +SRFP
Sbjct: 418 QFPNQRPSPPQSRFP 432
>At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (DPB)
similar to Swiss-Prot:Q14186 transcription factor DP-1
[Homo sapiens]; contains Pfam profile PF02319:
Transcription factor E2F/dimerisation partner (TDP)
Length = 385
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Frame = +2
Query: 5 ITRTPPHKR*TNDLEMATGPKIVHKQFNS-PIGLYSQQNIKETLN-----KHLKNLDNGS 166
+ +T PH T ++E++ ++VH FNS P L+ + +T+ N N S
Sbjct: 249 LVQTRPHA--TVEVEISEDMQLVHFDFNSTPFELHDDNFVLKTMKFCDQPPQQPNGRNNS 306
Query: 167 --VGIDFNNPTTDKPANLANSAVLRMLEEEERNRKGYSQKKVVWPPVPETNGYHNPQQQS 340
V +F +K + + L M E ++++ ++ P+PETN + +
Sbjct: 307 QLVCHNFTPENPNKGPSTGPTPQLDMYETHLQSQQHQQHSQLQIIPMPETNNVTSSADTA 366
Query: 341 PV 346
PV
Sbjct: 367 PV 368
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Frame = +1
Query: 139 TPEKPRQRICRNRLQQPDNG*AS*LS*FRRPKNVRRGRA*PQRIQSEESGVASSTRNERI 318
TP R N L PD+ + +S R +N + + Q S S R
Sbjct: 31 TPPGSPSRNVTNHLNAPDDNLMTLIS---RLENYSKEESEHQTTSLHSSSSVSGIRRPSS 87
Query: 319 S*STTAESR----VRQQRATLPVCSASLSKATSISTRAPISSSAS 441
S S+ + SR R+ + S S+ATS +TRA ++SS++
Sbjct: 88 SSSSRSTSRPPTPTRKSKTPAKRPSTPTSRATSTTTRATLTSSST 132
>At4g28485.1 68417.m04075 hypothetical protein contains Pfam profile
PF05078: Protein of unknown function (DUF679)
Length = 165
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 524 RQEQTGLSKLIPVGPG-VTASPLSPSQYRVGPASPGIAPQPYRPQPNRW 667
R+ ++ + +++ V P V SP S S Y PAS P P Q R+
Sbjct: 17 RKPKSKVERVVSVPPSPVAGSPASSSPYAPSPASSSPLPTPLETQTARY 65
>At3g05470.1 68416.m00599 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 884
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +2
Query: 620 SPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSRATRSRFPLNLSTH 754
SP AP P P PN P+ P +P P R R PL TH
Sbjct: 95 SPWPAPSP-SPFPNG-GPIESPAYPPAPPRPIPPHLRRPLPQRTH 137
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 536 TGLSKLIPVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPL 688
T + P P ++P++P+ R P +P P P P+P P+
Sbjct: 101 TSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPV 151
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 536 TGLSKLIPVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPL 688
T + P P ++P++P+ R P +P P P P+P P+
Sbjct: 101 TSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPV 151
>At1g54450.1 68414.m06211 calcium-binding EF-hand family protein
contains Pfam profile: PF00036 EF hand
Length = 535
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 571 SDCVALVSLAVPCGSGVPGHRTATLQATAKSLGPRTGPPL 690
+D A V+L V CG G G + + A R GPPL
Sbjct: 50 NDAKAGVALNVMCGGGSSGTNSGSNSPLASMFPARNGPPL 89
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 551 LIPV-GPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
L PV G+T +P S + P + G+ P P P + PVP PLFP
Sbjct: 188 LFPVQNMGMTPTPTSAPAIQPSPVT-GVTP-PGIPTSSPAMPVPQPLFP 234
>At5g59110.1 68418.m07407 subtilisin-like serine protease-related
similar to prepro-cucumisin GI:807698 from [Cucumis
melo], subtilisin-like protease C1 [Glycine max]
GI:13325079
Length = 172
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 288 CGLQYPKRTDIIIHNSRVPCTTTTRNTPRLLSLPIKS 398
CGL Y T +I + CT + PR L+ P S
Sbjct: 36 CGLNYTADTLALIAGETITCTKENKTLPRNLNYPSMS 72
>At4g33660.1 68417.m04781 expressed protein
Length = 76
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 590 SPSQYRVGPASP-GIAPQPYRPQPNRWAPVPGP 685
+P Y GP P G+ PQ Y P P P P P
Sbjct: 12 APGNYPQGPPPPVGVPPQYYPPPPPPPPPPPPP 44
>At2g26410.1 68415.m03169 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 516
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +2
Query: 518 GRRQEQTGLSKLIPVGPGVTASPLSPSQ-YRVGPASPGIAPQPYRPQPNRWAPVPGPLFP 694
G+++ + + P V SP S + Y P P APQP P P+ P P P +
Sbjct: 24 GKQKSRESFDFPLEETPPVDPSPSSVHRPYPPPPPLPDFAPQPLLPPPS--PPPPPPAYT 81
Query: 695 QNP---DRSRATRSRFPLNLST 751
N S+ +++R L L++
Sbjct: 82 INTRIYGESKESKNRQALALAS 103
>At4g38080.1 68417.m05378 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member: At2g22510
[Arabidopsis thaliana]
Length = 128
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 635 PQPYRPQPNRWAPVPGPLFPQNPDRSRATRSRFP 736
PQP PQP P+P P P++ + T P
Sbjct: 70 PQPTLPQPTGLPPMPSTQIPSLPNQVQPTIPNIP 103
>At1g66500.1 68414.m07554 zinc finger (C2H2-type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type,
domain; similar to S-locus protein 4 (GI:6069478)
[Brassica rapa]; similar to Pre-mRNA cleavage complex II
protein Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo
sapiens]
Length = 416
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +2
Query: 62 PKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSAVLRML 241
P ++ K+ + L + + K+TL N D+ VG+ F+NP++ N+ + +V++ L
Sbjct: 194 PIVLSKELTDLLSLLNNEKEKKTLEA--SNSDSLPVGLSFDNPSS---LNVRHESVIKSL 248
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/61 (29%), Positives = 22/61 (36%)
Frame = +2
Query: 557 PVGPGVTASPLSPSQYRVGPASPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSRATRSRFP 736
P P P SP P P + P P P P P P P P P S + +P
Sbjct: 73 PPSPPPCPPPPSPPP---SPPPPQLPPPPQLPPPAPPKPQPSPPTPDLPFASSLLKKVYP 129
Query: 737 L 739
+
Sbjct: 130 V 130
>At5g59090.1 68418.m07403 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]
Length = 736
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 288 CGLQYPKRTDIIIHNSRVPCTTTTRNTPRLLSLPIKS 398
CG+ Y +T II V C+ + PR L+ P S
Sbjct: 598 CGMNYTSKTLKIISGDTVKCSKKNKILPRNLNYPSMS 634
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = +2
Query: 575 TASPLSPSQYR--VGPASPGIAPQPYRPQPNRWAPVPGPLFPQNPDRSRATRSRFP 736
T+ P SPS V SP P P P PV P PQ P R P
Sbjct: 66 TSPPTSPSSSPPVVANPSPQTPENPSPPAPEGSTPVTPPAPPQTPSNQSPERPTPP 121
>At1g79890.1 68414.m09334 helicase-related similar to CHL1 potential
helicase protein (GI:2632247) [Homo sapiens]; similar to
helicase GB:AAB06962 [Homo sapiens]
Length = 882
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 146 KNLDNGSVGIDFNNPTTDKPANLANSAVLRML 241
+NL + +VG+D NP+ KP + A+ L
Sbjct: 419 RNLSSVNVGLDTENPSKSKPCGACSMAIYDFL 450
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,369,764
Number of Sequences: 28952
Number of extensions: 333657
Number of successful extensions: 1493
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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