Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31440
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   0.89 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   0.89 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.7  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 344 IEEYTCDWV*TVKRCNWIPFP 282
           IE  TCDW   V  C+ I  P
Sbjct: 82  IERQTCDWKTKVNNCDVIEKP 102


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 344 IEEYTCDWV*TVKRC 300
           I++ TCDW  +VK C
Sbjct: 83  IDKQTCDWKDSVKNC 97


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 344 IEEYTCDWV*TVKRCNWIPFP 282
           I++ TCDW   V  C+ +  P
Sbjct: 75  IDKQTCDWKGKVNNCDKLEKP 95


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 304 RLTVHTQSQVYSSMIQLRKFYPVVW 378
           + T   ++  Y S+ +L+K YP +W
Sbjct: 74  KCTEKQRTAAYRSIKRLKKEYPKIW 98


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 407 PYIPHFDDIVHTTG*NF 357
           P + HF+D+VH    NF
Sbjct: 296 PGVEHFEDVVHKKCSNF 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,776
Number of Sequences: 336
Number of extensions: 3707
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)