Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31440
(622 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 266 8e-72
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 100 2e-21
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 98 5e-21
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 97 6e-21
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 94 6e-20
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 93 2e-19
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 92 3e-19
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 88 5e-18
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 87 9e-18
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 87 1e-17
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 87 1e-17
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 86 2e-17
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 85 4e-17
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 83 1e-16
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 83 1e-16
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 83 2e-16
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 82 3e-16
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 81 8e-16
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 80 1e-15
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 79 2e-15
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 78 4e-15
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 77 7e-15
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 77 9e-15
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 77 1e-14
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 76 2e-14
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 76 2e-14
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 75 3e-14
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 75 5e-14
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 74 7e-14
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 73 1e-13
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 73 1e-13
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 73 1e-13
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 73 1e-13
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 73 1e-13
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 73 1e-13
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 73 2e-13
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 73 2e-13
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 73 2e-13
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 73 2e-13
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 73 2e-13
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 73 2e-13
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 73 2e-13
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 73 2e-13
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 73 2e-13
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 73 2e-13
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 73 2e-13
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 72 3e-13
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 71 5e-13
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 71 5e-13
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 71 8e-13
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 69 2e-12
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 69 2e-12
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 69 2e-12
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 69 3e-12
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 69 3e-12
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 68 4e-12
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 67 1e-11
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 67 1e-11
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 67 1e-11
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 67 1e-11
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 67 1e-11
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 67 1e-11
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 67 1e-11
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 66 1e-11
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 66 1e-11
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 66 2e-11
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 66 2e-11
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 66 2e-11
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 65 3e-11
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 65 3e-11
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 65 3e-11
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 64 5e-11
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 64 5e-11
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 64 5e-11
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 64 5e-11
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 64 5e-11
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 64 7e-11
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 64 9e-11
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 64 9e-11
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 64 9e-11
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 63 1e-10
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 63 2e-10
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 63 2e-10
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 62 3e-10
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 62 3e-10
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 62 4e-10
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 62 4e-10
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 61 7e-10
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 61 7e-10
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 61 7e-10
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 61 7e-10
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 60 9e-10
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 60 9e-10
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 60 1e-09
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 60 1e-09
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 60 1e-09
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 60 2e-09
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 60 2e-09
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 60 2e-09
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 59 2e-09
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 59 2e-09
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 59 3e-09
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 59 3e-09
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 58 4e-09
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 58 4e-09
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 58 5e-09
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 58 6e-09
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 56 1e-08
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 56 1e-08
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 56 2e-08
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 56 2e-08
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 56 2e-08
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 56 2e-08
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 56 2e-08
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 56 3e-08
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 55 3e-08
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 55 3e-08
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 55 4e-08
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 55 4e-08
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 54 6e-08
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 54 8e-08
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 54 8e-08
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 54 1e-07
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 53 1e-07
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 53 1e-07
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 53 2e-07
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 52 2e-07
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 52 2e-07
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 52 3e-07
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 52 3e-07
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 52 3e-07
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 52 4e-07
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 52 4e-07
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 51 5e-07
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 51 5e-07
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 51 5e-07
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 51 5e-07
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 51 7e-07
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 51 7e-07
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 50 9e-07
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 50 9e-07
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 50 1e-06
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 50 1e-06
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 50 2e-06
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 48 4e-06
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 48 4e-06
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 48 4e-06
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 48 5e-06
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 48 7e-06
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 47 9e-06
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 47 9e-06
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 47 1e-05
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 46 2e-05
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 46 2e-05
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 46 2e-05
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 46 2e-05
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 46 2e-05
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 46 3e-05
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 46 3e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 45 4e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 45 4e-05
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 45 4e-05
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 45 4e-05
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 45 4e-05
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 45 4e-05
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 45 4e-05
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 45 4e-05
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 45 5e-05
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 45 5e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 44 6e-05
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 44 8e-05
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 44 8e-05
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 44 8e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 44 1e-04
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 44 1e-04
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 44 1e-04
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 44 1e-04
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 43 1e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 43 1e-04
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 43 1e-04
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 43 2e-04
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 42 2e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 42 2e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 42 2e-04
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 42 2e-04
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 42 4e-04
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 41 6e-04
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 41 6e-04
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 41 6e-04
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 41 6e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 41 8e-04
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 41 8e-04
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 40 0.001
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 40 0.001
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 40 0.001
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 40 0.001
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 40 0.001
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 40 0.002
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 40 0.002
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 39 0.002
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 39 0.002
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 39 0.002
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 39 0.002
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 39 0.003
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 38 0.004
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 38 0.004
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 38 0.004
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 38 0.004
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 38 0.005
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 38 0.005
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 38 0.005
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 38 0.007
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 38 0.007
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 38 0.007
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 38 0.007
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 37 0.009
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 37 0.009
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 37 0.012
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 37 0.012
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 36 0.016
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 36 0.022
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 36 0.029
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 35 0.038
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 35 0.050
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 35 0.050
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 34 0.066
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 34 0.066
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 34 0.087
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 34 0.087
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 34 0.087
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 34 0.087
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 34 0.087
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 34 0.087
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 33 0.12
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 33 0.12
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 33 0.12
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 33 0.15
At5g11560.1 68418.m01348 PQQ enzyme repeat-containing protein co... 32 0.35
At5g54730.1 68418.m06815 expressed protein 31 0.47
At5g51660.1 68418.m06405 cleavage and polyadenylation specificit... 31 0.47
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 0.81
At2g32160.2 68415.m03931 expressed protein 30 1.4
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 1.9
At1g15960.1 68414.m01915 NRAMP metal ion transporter 6, putative... 29 2.5
At1g03380.1 68414.m00317 expressed protein 29 2.5
At1g80830.1 68414.m09483 NRAMP metal ion transporter 1 (NRAMP1) ... 29 3.3
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 29 3.3
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 28 4.3
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 28 4.3
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 28 4.3
At3g56970.1 68416.m06340 basic helix-loop-helix (bHLH) family pr... 28 4.3
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 28 4.3
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 5.7
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 28 5.7
At4g33440.1 68417.m04751 glycoside hydrolase family 28 protein /... 28 5.7
At3g45070.1 68416.m04858 sulfotransferase family protein similar... 28 5.7
At3g17150.1 68416.m02188 invertase/pectin methylesterase inhibit... 28 5.7
At5g48040.1 68418.m05936 hypothetical protein 27 7.6
At3g52910.1 68416.m05831 expressed protein nearly identical to t... 27 7.6
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 27 7.6
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 266 bits (652), Expect = 8e-72
Identities = 109/206 (52%), Positives = 152/206 (73%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+I +W V+G C+N MV+KGH AI+ L ++ DGS + + + D TV WDV TG +IKK+
Sbjct: 76 EIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMA 135
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKI 362
H++FVNS RRGP L++S SDD T KLWD R+R + +F Y +T+V F+D A+KI
Sbjct: 136 EHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKI 195
Query: 363 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFA 542
+ GVDN +K+WD+R + ++ ++GH DT+TG+SLS DG+YLL+N MDN L +WD+RP+A
Sbjct: 196 FTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYA 255
Query: 543 PTERCVKLMSGHQHNFEKNLLRCAWS 620
P RCVK+ GHQHNFEKNLL+C+WS
Sbjct: 256 PQNRCVKIFEGHQHNFEKNLLKCSWS 281
Score = 71.3 bits (167), Expect = 5e-13
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 3/183 (1%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGA 218
+M++ GH A+ + F+P G+ + +G+ D + +W V + LKGH N + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIK 392
G + +VSAS D T++ WD + SS+ + I+S D K
Sbjct: 106 SDGSQ-IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 393 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMS 572
+WD+R +++ +T +S S + + +DN +++WD+R T +
Sbjct: 165 LWDMRQRG-AIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEAT----MTLE 219
Query: 573 GHQ 581
GHQ
Sbjct: 220 GHQ 222
Score = 57.6 bits (133), Expect = 6e-09
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 251
I + FS ++TG DN V VWD+ G L+GH + + +S + G LL +
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 252 DDNTIKLWDARKRNP----VASFDSSYP-----VTSVLFNDTAEKILSSGVDNVIKMWDI 404
D N + +WD R P V F+ + ++ K+ + D ++ +WD
Sbjct: 243 D-NKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Query: 405 RNNQISLKIKGHTDTV 452
+ + K+ GHT +V
Sbjct: 302 TSRRTIYKLPGHTGSV 317
Score = 55.2 bits (127), Expect = 3e-08
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 10/191 (5%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 212
+ + M H+ + C + G L +G+ D T +WD+ I+ + +VS
Sbjct: 129 KQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVS 187
Query: 213 GARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVI 389
+ ++ D N +K+WD RK + + +T + + +L++G+DN +
Sbjct: 188 FSDAADKIFTGGVD-NDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKL 246
Query: 390 KMWDIR----NNQISLKIKGHTDTVTG--LSLSW--DGAYLLSNSMDNTLRIWDVRPFAP 545
+WD+R N+ +GH L SW DG + + S D + IWD
Sbjct: 247 CVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD----TT 302
Query: 546 TERCVKLMSGH 578
+ R + + GH
Sbjct: 303 SRRTIYKLPGH 313
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 251
+++ +SPDG+ + G++D V +WD + I KL GH VN P ++ S S
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEP-IIGSCS 333
Query: 252 DDNTIKL 272
D I L
Sbjct: 334 SDKNIYL 340
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 99.5 bits (237), Expect = 2e-21
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
+N V++GH G + + F P TG+ D T+ +WDV TG L GH V ++
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 216 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIK 392
+ R + SA DD +K WD + + S+ V + + T + +L+ G D+V +
Sbjct: 227 SNR-HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 393 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+WDIR + GH +TV + +++ S D T++ WD+R
Sbjct: 286 VWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR 332
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 8/179 (4%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W++ + + + + GH + + P + TG+ D T+ WD+ G + L H
Sbjct: 286 VWDIRTKMQ-IFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHK 344
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 371
V +++ SAS DNT K + + + + + +++
Sbjct: 345 KSVRAMT-LHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTG 403
Query: 372 GVDNVIKMWDIRNN---QISLKI--KGHTDTVTGL-SLSWD--GAYLLSNSMDNTLRIW 524
G + I WD ++ Q S I G ++ G+ + +D G+ L++ D T+++W
Sbjct: 404 GDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 97.9 bits (233), Expect = 5e-21
Identities = 52/179 (29%), Positives = 101/179 (56%), Gaps = 5/179 (2%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
IW+ E + V++GHT + + F+P + + +G+ D T+ +W+V TG ++ +K H+
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKIL 365
++SV R G L+VSAS D + K+WDA++ + + D S V+ F+ + IL
Sbjct: 171 MPISSVHFNRDG-SLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFIL 229
Query: 366 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW---DGAYLLSNSMDNTLRIWDVR 533
+ +D+ +K+ + + GHT+ V ++ ++ +G Y++S S DN + +WD++
Sbjct: 230 VATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQ 288
Score = 92.7 bits (220), Expect = 2e-19
Identities = 47/173 (27%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Frame = +3
Query: 21 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFV 200
+Y ++ ++GHT AI + FS DG+ L + + D T+ +W + I + +GH++ +
Sbjct: 29 IYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI 88
Query: 201 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSG 374
+ ++ + SASDD T+++WDAR + V V FN + I+S
Sbjct: 89 SDLAWS-SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGS 147
Query: 375 VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
D I++W+++ + IK H+ ++ + + DG+ ++S S D + +IWD +
Sbjct: 148 FDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Score = 70.5 bits (165), Expect = 8e-13
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Frame = +3
Query: 6 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
I IW V G+C V ++K H+ I + F+ DGS + + + D + +WD GT +K L
Sbjct: 152 IRIWEVKTGKC--VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDT 350
+ S + + ++ A+ D+T+KL + + + + + +TS
Sbjct: 210 DDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTN 269
Query: 351 AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS--NSMDNTLRIW 524
+ I+S DN + +WD++ I +++GHTD V +S + S N +D T+RIW
Sbjct: 270 GKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/85 (34%), Positives = 48/85 (56%)
Frame = +3
Query: 324 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 503
++ V F++ + S+ VD + +W N + + +GH+ ++ L+ S D Y S S
Sbjct: 46 ISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASD 105
Query: 504 DNTLRIWDVRPFAPTERCVKLMSGH 578
D TLRIWD R +P E C+K++ GH
Sbjct: 106 DCTLRIWDAR--SPYE-CLKVLRGH 127
Score = 30.7 bits (66), Expect = 0.81
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 429 IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTER 554
++GHT ++ + S DG L S S+D T+ +W ++ R
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHR 80
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 97.5 bits (232), Expect = 6e-21
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
E V GH I + FS D + + + D T+ +WDV TG+ IK L GH N+ V+
Sbjct: 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF 121
Query: 216 ARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIK 392
+ ++VS S D T+++WD + + S PVT+V FN I+SS D + +
Sbjct: 122 NPQS-NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCR 180
Query: 393 MWDIRNNQ-ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLM 569
+WD + I V+ + S +G ++L ++DNTLR+W++ + + +K
Sbjct: 181 IWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI----SSAKFLKTY 236
Query: 570 SGH 578
+GH
Sbjct: 237 TGH 239
Score = 89.4 bits (212), Expect = 2e-18
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 7/180 (3%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-----PTGTRIKKLKGHANFVNSVSG 215
+ H A+ + FS DG L + + D T+ + + P +++ GH N ++ V+
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 216 ARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVI 389
+ +VSASDD T+KLWD + + + ++Y V FN + I+S D +
Sbjct: 80 SSDA-RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC-VNFNPQSNMIVSGSFDETV 137
Query: 390 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLM 569
++WD+ + + H+D VT + + DG+ ++S+S D RIWD + T CVK +
Sbjct: 138 RIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD----SGTGHCVKTL 193
Score = 85.0 bits (201), Expect = 4e-17
Identities = 50/179 (27%), Positives = 94/179 (52%), Gaps = 6/179 (3%)
Frame = +3
Query: 6 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ IW+V G+C + V+ H+ + + F+ DGS + + + D +WD TG +K L
Sbjct: 137 VRIWDVTTGKC--LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 183 GHANF-VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFND 347
N V+ V + G +LV D NT++LW+ + ++ ++ Y ++S
Sbjct: 195 DDENPPVSFVRFSPNGKFILVGTLD-NTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVT 253
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
++I+S DN + MW++ + ++ K++GHT+TV ++ + S S+D T+RIW
Sbjct: 254 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 94.3 bits (224), Expect = 6e-20
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
+N V++GH G + + F P TG+ D T+ +WDV TG L GH V ++
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 216 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEKILSSGVDNVIK 392
+ R + SA DD +K WD + + S+ + V + + T + +L+ G D+V +
Sbjct: 221 SNR-HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 393 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+WDIR + +D + L+ D +++ S D+T++ WD+R
Sbjct: 280 VWDIRTKMQIFVLPHDSDVFSVLARPTD-PQVITGSHDSTIKFWDLR 325
Score = 66.5 bits (155), Expect = 1e-11
Identities = 41/168 (24%), Positives = 75/168 (44%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
I IW+V + + GH G + L S +++++ D V WD+ I+ G
Sbjct: 194 IKIWDVATGVLK-LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHG 252
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL 365
H + V ++ +++++ D+ ++WD R + + V SVL T +++
Sbjct: 253 HLHGVYCLA-LHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVI 311
Query: 366 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
+ D+ IK WD+R + I H TV ++L +S S DN
Sbjct: 312 TGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADN 359
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 92.7 bits (220), Expect = 2e-19
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
++ +W + G+ ++M + GHT A+ + F + GA+ + +WDV ++
Sbjct: 39 KVNLWAI-GKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFT 97
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEK 359
GH + ++V G E L S S D +K+WD RK+ + ++ S ++++ F
Sbjct: 98 GHRSNCSAVEFHPFG-EFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRW 156
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
++S G+DNV+K+WD+ ++ + K H + L L + S D T++ WD+ F
Sbjct: 157 VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETF 216
Score = 77.4 bits (182), Expect = 7e-15
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
H+ + L S L+ TG D V +W + T + L GH + V+SV A E+
Sbjct: 14 HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSV--AFDSAEV 71
Query: 237 LVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
LV A + IKLWD + V +F ++V F+ E + S D +K+WDIR
Sbjct: 72 LVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Query: 411 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
KGH+ ++ + + DG +++S +DN +++WD+
Sbjct: 132 KGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171
Score = 68.5 bits (160), Expect = 3e-12
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Frame = +3
Query: 159 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSV 335
G ++++ H+ VN +S ++ L ++ DD + LW K + S + V SV
Sbjct: 5 GYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSV 64
Query: 336 LFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 515
F+ +L+ VIK+WD+ ++ GH + + G +L S S D L
Sbjct: 65 AFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANL 124
Query: 516 RIWDVRPFAPTERCVKLMSGH 578
+IWD+R + C++ GH
Sbjct: 125 KIWDIR----KKGCIQTYKGH 141
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
K H G I L F P L TG+ D TV WD+ T I + A V S+ G
Sbjct: 181 KFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRT 240
Query: 234 LLVSASDDNTIKLWD 278
L D + W+
Sbjct: 241 LFCGLDDSLKVYSWE 255
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 91.9 bits (218), Expect = 3e-19
Identities = 53/161 (32%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
+KGHTG + + S D + +G+ D +V VWD T +++LKGH + V+ V
Sbjct: 895 LKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVK--MLSG 950
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 407
E +++A+ D T+K+WD R VA+ S + S+ ++D+ + ++G D V +WDIR
Sbjct: 951 ERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIR 1010
Query: 408 NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ + K+KGHT + + + D L++ S D T R+W V
Sbjct: 1011 SGKQMHKLKGHTKWIRSIRMVED--TLITGSDDWTARVWSV 1049
Score = 68.9 bits (161), Expect = 3e-12
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQL--------CF----SPDGSHLYTGATDNTVAVWDVPT-GTRIKK- 176
NV V+KGH GA+ L C D +G+TD V +WD G+ ++
Sbjct: 835 NVRVLKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRAT 894
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 356
LKGH V ++S + RG +VS SDD ++ +WD + + S + + E
Sbjct: 895 LKGHTGTVRAIS-SDRGK--IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGE 951
Query: 357 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
++L++ D +KMWD+R + + + + L L + D IWD+R
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIR 1010
Score = 36.7 bits (81), Expect = 0.012
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
IW++ + + +KGHT I + D L TG+ D T VW V G+ L HA
Sbjct: 1006 IWDIRSG-KQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVLACHA 1062
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 371
V SV + + +++ S D ++ W+ + + + +S+L + E L
Sbjct: 1063 GPVQSVEYS-PFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSILSINAGENWLGI 1121
Query: 372 G-VDNVIKMWDIRNNQISLKIKG 437
G DN + ++ R + K+ G
Sbjct: 1122 GAADNSMSLFH-RPSNAGTKVSG 1143
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 87.8 bits (208), Expect = 5e-18
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
++ +W + G+ ++ + GH+ I + F + GA T+ +WD+ ++ L
Sbjct: 133 KVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLT 191
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEK 359
GH + SV+ G E S S D +K+WD RK+ + ++ +VL F
Sbjct: 192 GHRSNCVSVNFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 250
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
I+S G DNV+K+WD+ ++ + K H + L L + S D T++ WD+ F
Sbjct: 251 IVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETF 310
Score = 79.4 bits (187), Expect = 2e-15
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS-GARRGPE 233
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ A G
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG-- 165
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
L+ + + TIKLWD + V + SV F+ E S +D +K+WDIR
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Query: 411 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD------VRPFAPTERCVKLMS 572
KGHT V L + DG +++S DN +++WD + F E ++ +
Sbjct: 226 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD 285
Query: 573 GHQHNF 590
H H F
Sbjct: 286 FHPHEF 291
Score = 60.9 bits (141), Expect = 7e-10
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Frame = +3
Query: 12 IWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 188
IW++ + C + KGHT + L F+PDG + +G DN V VWD+ G + + K H
Sbjct: 220 IWDIRKKGC--IHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Query: 189 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKIL 365
+ S+ LL + S D T+K WD + S + + V + FN + +L
Sbjct: 278 EGKIQSLD-FHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL 336
Query: 366 SSGVDNVIKMW 398
G+ +K++
Sbjct: 337 -CGLQESLKIF 346
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 87.0 bits (206), Expect = 9e-18
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W G + +GH + ++ F P G +L T + D T +WD+ TG + +GH+
Sbjct: 324 LWKTDGTL--LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHS 381
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILS 368
V ++ + G L S D+ ++WD R + F PV SV F+ + S
Sbjct: 382 RSVYGIAFQQDGA-LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLAS 440
Query: 369 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRIWDVRPFAP 545
G DN ++WD+R + I H + V+ + +G +L + S D + IW R F+
Sbjct: 441 GGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFS- 499
Query: 546 TERCVKLMSGHQ 581
VK ++GH+
Sbjct: 500 ---LVKSLAGHE 508
Score = 81.0 bits (191), Expect = 6e-16
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W + + V+K H + FSP L T + D T +W GT ++ +GH
Sbjct: 281 LWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD-GTLLQTFEGHL 339
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILS 368
+ + V+ G + L + S D T +LWD + + S V + F S
Sbjct: 340 DRLARVAFHPSG-KYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAAS 398
Query: 369 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
G+D++ ++WD+R + L +GH V ++ S +G +L S DN RIWD+R
Sbjct: 399 CGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
Score = 75.4 bits (177), Expect = 3e-14
Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 2/173 (1%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W++ E +++ +GH+ ++ + F DG+ + D+ VWD+ TG I +GH
Sbjct: 365 LWDINTGAE-LLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHI 423
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK--IL 365
V SV+ + G L S +DN ++WD R R + + + S + + E +
Sbjct: 424 KPVFSVNFSPNGYHL-ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLA 482
Query: 366 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
++ D + +W R+ + + GH V L ++ D + + + S D T+++W
Sbjct: 483 TASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 67.7 bits (158), Expect = 6e-12
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRGPELLVSASDDNT 263
FS DG L T + +W++P T I LK H V + + L +AS D T
Sbjct: 263 FSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFS-PVDDCLATASADRT 321
Query: 264 IKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGH 440
KLW + +F+ + V F+ + + + ++ D ++WDI L +GH
Sbjct: 322 AKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGH 380
Query: 441 TDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
+ +V G++ DGA S +D+ R+WD+R T R + + GH
Sbjct: 381 SRSVYGIAFQQDGALAASCGLDSLARVWDLR----TGRSILVFQGH 422
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
+++V +GH + + FSP+G HL +G DN +WD+ + + HAN V+ V
Sbjct: 415 SILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYE 474
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKM 395
+ L +AS D + +W R + V S V S+ + I + D IK+
Sbjct: 475 PQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKL 534
Query: 396 WDIRNN 413
W N
Sbjct: 535 WTSSGN 540
Score = 31.1 bits (67), Expect = 0.62
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 300 ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR--NNQISLKIKGHTDTVTGLSLSW 473
++F P+T F+ + + + + V K+W++ N I++ +K H + T + S
Sbjct: 250 SNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAV-LKDHKERATDVVFSP 308
Query: 474 DGAYLLSNSMDNTLRIW 524
L + S D T ++W
Sbjct: 309 VDDCLATASADRTAKLW 325
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 86.6 bits (205), Expect = 1e-17
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
++ +W + G+ ++ + GH+ I + F + GA T+ +WD+ ++ L
Sbjct: 40 KVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT 98
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEK 359
GH + SV G E S S D +K+WD RK+ + ++ +VL F
Sbjct: 99 GHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 157
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
++S G DN++K+WD+ ++ + K H + L L + S D T++ WD+ F
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF 217
Score = 76.6 bits (180), Expect = 1e-14
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ E+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD--ASEV 72
Query: 237 LVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
LV+A + TIKLWD + V + SV F+ E S +D +K+WDIR
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 411 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD------VRPFAPTERCVKLMS 572
KGHT V L + DG +++S DN +++WD + F E ++ +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 192
Query: 573 GHQHNF 590
H H F
Sbjct: 193 FHPHEF 198
Score = 58.8 bits (136), Expect = 3e-09
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +3
Query: 12 IWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 188
IW++ + C + KGHT + L F+PDG + +G DN V VWD+ G + + K H
Sbjct: 127 IWDIRKKGC--IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Query: 189 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS-FDSSYPVTSVLFNDTAEKIL 365
+ S+ LL + S D T+K WD + S + V + FN + +L
Sbjct: 185 EGQIQSLD-FHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Query: 366 SSGVDNVIKMW 398
G+ +K++
Sbjct: 244 -CGLQESLKIF 253
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 86.6 bits (205), Expect = 1e-17
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
++ +W + G+ ++ + GH+ I + F + GA T+ +WD+ ++ L
Sbjct: 40 KVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT 98
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEK 359
GH + SV G E S S D +K+WD RK+ + ++ +VL F
Sbjct: 99 GHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 157
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
++S G DN++K+WD+ ++ + K H + L L + S D T++ WD+ F
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF 217
Score = 76.6 bits (180), Expect = 1e-14
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ E+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD--ASEV 72
Query: 237 LVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
LV+A + TIKLWD + V + SV F+ E S +D +K+WDIR
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 411 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD------VRPFAPTERCVKLMS 572
KGHT V L + DG +++S DN +++WD + F E ++ +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 192
Query: 573 GHQHNF 590
H H F
Sbjct: 193 FHPHEF 198
Score = 58.8 bits (136), Expect = 3e-09
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +3
Query: 12 IWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 188
IW++ + C + KGHT + L F+PDG + +G DN V VWD+ G + + K H
Sbjct: 127 IWDIRKKGC--IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Query: 189 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS-FDSSYPVTSVLFNDTAEKIL 365
+ S+ LL + S D T+K WD + S + V + FN + +L
Sbjct: 185 EGQIQSLD-FHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Query: 366 SSGVDNVIKMW 398
G+ +K++
Sbjct: 244 -CGLQESLKIF 253
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 224
M + GHT + + F+ + + GA+ + +WD+ ++ GH + ++V
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF 60
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
G E L S S D +++WD RK+ + ++ + ++++ F+ ++S G+DNV+K+WD
Sbjct: 61 G-EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWD 119
Query: 402 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
+ ++ + K H + L L + S D T++ WD+ F
Sbjct: 120 LTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETF 165
Score = 64.1 bits (149), Expect = 7e-11
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
I +W++ + + V GH + F P G L +G++D + VWD I+ KG
Sbjct: 31 IKLWDLE-ESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKG 89
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKI 362
H ++++ + G +VS DN +K+WD + F P+ S+ F+ +
Sbjct: 90 HTRGISTIEFSPDG-RWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLL 148
Query: 363 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRP 536
+ D +K WD+ ++ + V ++ DG L +D+ L+++ P
Sbjct: 149 ATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFC-GLDDGLKVYSWEP 205
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = +3
Query: 321 PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNS 500
PV SV FN +L+ VIK+WD+ +++ GH + + G +L S S
Sbjct: 9 PVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGS 68
Query: 501 MDNTLRIWDVRPFAPTERCVKLMSGH 578
D LR+WD R + C++ GH
Sbjct: 69 SDTNLRVWDTR----KKGCIQTYKGH 90
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 85.0 bits (201), Expect = 4e-17
Identities = 44/159 (27%), Positives = 80/159 (50%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
G G I+ + + D + + N + VWDV +G L GH + V +V ++
Sbjct: 271 GSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRH 330
Query: 237 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 416
+VSA+ D TIKLWD K + + ++ + + S +D +++WDI+ +
Sbjct: 331 VVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGK 390
Query: 417 ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ ++ GH+ VT +SLS +G +L++ DN ++D R
Sbjct: 391 LLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTR 429
Score = 71.3 bits (167), Expect = 5e-13
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H G + F + L+TG D V +WD +GT IK L G + ++ + +
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMA-VTHDNKSV 288
Query: 240 VSASDDNTIKLWD---ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
++A+ N + +WD R R+ + V ++ ++S+ D IK+WD+
Sbjct: 289 IAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDV-SKFSSRHVVSAAYDRTIKLWDLHK 347
Query: 411 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
+ + T + LS DG + S MD LR+WD++ T + + ++GH
Sbjct: 348 GYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQ----TGKLLSEVAGH 398
Score = 54.8 bits (126), Expect = 4e-08
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Frame = +3
Query: 6 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGS-HLYTGATDNTVAVWDVPTGTRIKKL 179
+ +W+V G+ + + GHT + + S S H+ + A D T+ +WD+ G +
Sbjct: 297 LFVWDVSSGRVRHTLT--GHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTV 354
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAE 356
+N N++ + G + D N ++LWD + ++ S VTSV +
Sbjct: 355 LFTSN-CNAICLSIDGLTVFSGHMDGN-LRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGN 412
Query: 357 KILSSGVDNVIKMWDIRNNQI--SLKIKGH--TDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+IL+SG DNV ++D R +I +L+ G+ + +S D Y+ + S D ++ +W
Sbjct: 413 RILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVW 472
Query: 525 DV 530
+
Sbjct: 473 SL 474
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 84 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 263
C SPD ++ G+ D +V VW + G + LK + + S + G + L SA +
Sbjct: 452 CISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIG-KPLASADKNGY 510
Query: 264 IKLW 275
+ W
Sbjct: 511 VCTW 514
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 83.0 bits (196), Expect = 1e-16
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 3/179 (1%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
Q+L+W+ + ++ +GH + + +SPD L TGA DN V VW+V +GT
Sbjct: 330 QLLVWDWRTETY-ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFT 388
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAE 356
H N V ++ LL SAS D T++ WD ++ ++ + P S+ + + +
Sbjct: 389 EHTNAVTALHFMADNHSLL-SASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGD 447
Query: 357 KILSSGVDNV-IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ + +D+ I +W + QI + GH V GL S L S+S D T+R+WDV
Sbjct: 448 VVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDV 506
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +3
Query: 222 RGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMW 398
RG L + + +WD R + Y V V ++ ++ + + DN +K+W
Sbjct: 317 RGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 376
Query: 399 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
++ + + HT+ VT L D LLS S+D T+R WD + +
Sbjct: 377 NVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRY 423
Score = 37.9 bits (84), Expect = 0.005
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +3
Query: 3 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 179
+I +W+ GQ ++++ GH + L FSP L + + D TV +WDV +
Sbjct: 458 EIFVWSKKTGQIKDIL--SGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVET 515
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWD 278
H + V +V+ G + L S++ D I WD
Sbjct: 516 FRHNHDVLTVAFRPDGKQ-LASSTLDGQINFWD 547
Score = 33.9 bits (74), Expect = 0.087
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ +W+V+ V + H ++ + F PDG L + D + WD G + ++G
Sbjct: 501 VRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 559
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--------LKGHANFVNSVSGARRGPEL 236
LC+S DG ++ T + ++D+ +++ L G +F++S GP
Sbjct: 587 LCYSADGGYILAAGTSRYICMYDIADQVLLRRFQISHNLSLDGVLDFLHSKKMTEAGPID 646
Query: 237 LVSASDDNT 263
L+ DDN+
Sbjct: 647 LI--DDDNS 653
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 83.0 bits (196), Expect = 1e-16
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 3/179 (1%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
Q+L+W+ + ++ +GH + + +SPD L TGA DN V VW+V +GT
Sbjct: 370 QLLVWDWRTETY-ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFT 428
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAE 356
H N V ++ LL SAS D T++ WD ++ ++ + P S+ + + +
Sbjct: 429 EHTNAVTALHFMADNHSLL-SASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGD 487
Query: 357 KILSSGVDNV-IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ + +D+ I +W + QI + GH V GL S L S+S D T+R+WDV
Sbjct: 488 VVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDV 546
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +3
Query: 222 RGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMW 398
RG L + + +WD R + Y V V ++ ++ + + DN +K+W
Sbjct: 357 RGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 416
Query: 399 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
++ + + HT+ VT L D LLS S+D T+R WD + +
Sbjct: 417 NVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRY 463
Score = 37.9 bits (84), Expect = 0.005
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +3
Query: 3 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 179
+I +W+ GQ ++++ GH + L FSP L + + D TV +WDV +
Sbjct: 498 EIFVWSKKTGQIKDIL--SGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVET 555
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWD 278
H + V +V+ G + L S++ D I WD
Sbjct: 556 FRHNHDVLTVAFRPDGKQ-LASSTLDGQINFWD 587
Score = 33.9 bits (74), Expect = 0.087
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ +W+V+ V + H ++ + F PDG L + D + WD G + ++G
Sbjct: 541 VRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 599
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--------LKGHANFVNSVSGARRGPEL 236
LC+S DG ++ T + ++D+ +++ L G +F++S GP
Sbjct: 627 LCYSADGGYILAAGTSRYICMYDIADQVLLRRFQISHNLSLDGVLDFLHSKKMTEAGPID 686
Query: 237 LVSASDDNT 263
L+ DDN+
Sbjct: 687 LI--DDDNS 693
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 82.6 bits (195), Expect = 2e-16
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
M GH+ + + S DG +G+ D + +WD+ TG ++ GH V SV+ +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 231 ELLVSASDDNTIKLWDA--RKRNPVASFDSSYP-VTSVLF--NDTAEKILSSGVDNVIKM 395
++ VSAS D TIKLW+ + ++ D V+ V F N I+S+ D +K+
Sbjct: 119 QI-VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 396 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
W+++N ++ + GH+ + +++S DG+ S D + +WD+
Sbjct: 178 WNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Score = 54.8 bits (126), Expect = 4e-08
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Frame = +3
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP---VAS---FDSSYPVTSVLFND 347
H + V +++ +++V++S D +I LW K + VA S+ V V+ +
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+ LS D +++WD+ + + + GHT V ++ S D ++S S D T+++W+
Sbjct: 74 DGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Score = 50.4 bits (115), Expect = 9e-07
Identities = 24/98 (24%), Positives = 52/98 (53%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ +WN+ C+ + GH+G + + SPDGS +G D + +WD+ G ++ L+
Sbjct: 175 VKVWNLQN-CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV 299
+ ++S+ + + A+ +N+I++WD ++ V
Sbjct: 234 -GSIIHSLCFSPN--RYWLCAATENSIRIWDLESKSVV 268
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 345 DTAEKILSSGVDNVIKMWDIRNNQISL-----KIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
D ++ I++S D I +W + S ++ GH+ V + LS DG + LS S D
Sbjct: 26 DNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDG 85
Query: 510 TLRIWDVRPFAPTERCV 560
LR+WD+ T R V
Sbjct: 86 ELRLWDLATGESTRRFV 102
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQ-LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
IL+W++ E + G+I+ LCFSP+ L AT+N++ +WD+ + + ++ LK
Sbjct: 217 ILLWDL---AEGKKLYSLEAGSIIHSLCFSPNRYWL-CAATENSIRIWDLESKSVVEDLK 272
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDV 152
L +S DG+ L++G TD + VW +
Sbjct: 300 LNWSADGNTLFSGYTDGVIRVWGI 323
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 82.2 bits (194), Expect = 3e-16
Identities = 44/177 (24%), Positives = 78/177 (44%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
++ GH+G + FSP G + + + D T+ +W + KGH V + G
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 228 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 407
S S D T ++W + P+ ++ V ++ I + D +++WD++
Sbjct: 473 -HYFASCSHDRTARIWSMDRIQPLRIMAGH--LSDVDWHPNCNYIATGSSDKTVRLWDVQ 529
Query: 408 NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
+ GH V L++S DG Y+ S D T+ +WD+ T RC+ + GH
Sbjct: 530 TGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL----STARCITPLMGH 582
Score = 77.0 bits (181), Expect = 9e-15
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 1/191 (0%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
N++ KGH + FSP G + + + D T +W + ++ + GH + V+
Sbjct: 452 NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDWHPNC 511
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKM 395
+ + S D T++LWD + V F V S+ + + S D I M
Sbjct: 512 N----YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 567
Query: 396 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSG 575
WD+ + + GH V LS S +G+ L S S D T+++WDV KL
Sbjct: 568 WDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV------TSSTKLTKA 621
Query: 576 HQHNFEKNLLR 608
+ N N LR
Sbjct: 622 EEKNGNSNRLR 632
Score = 69.7 bits (163), Expect = 1e-12
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 6 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W+V G+C + + GH ++ L SPDG ++ +G D T+ +WD+ T I L
Sbjct: 523 VRLWDVQTGECVRIFI--GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM 580
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWD 278
GH + V S+S + G LL S S D T+KLWD
Sbjct: 581 GHNSCVWSLSYSGEG-SLLASGSADCTVKLWD 611
Score = 64.9 bits (151), Expect = 4e-11
Identities = 38/137 (27%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
IW++ + + + +M GH + + + P+ +++ TG++D TV +WDV TG ++ GH
Sbjct: 486 IWSM-DRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHR 541
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWD---ARKRNPVASFDSSYPVTSVLFNDTAEKI 362
+ V S++ + G + S +D TI +WD AR P+ +S V S+ ++ +
Sbjct: 542 SMVLSLAMSPDG-RYMASGDEDGTIMMWDLSTARCITPLMGHNSC--VWSLSYSGEGSLL 598
Query: 363 LSSGVDNVIKMWDIRNN 413
S D +K+WD+ ++
Sbjct: 599 ASGSADCTVKLWDVTSS 615
Score = 55.2 bits (127), Expect = 3e-08
Identities = 46/163 (28%), Positives = 71/163 (43%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 269
S DGS + G +D+++ VWD+ A + SGA L + +D +
Sbjct: 361 SHDGSLVAGGFSDSSIKVWDM------------AKIGQAGSGA------LQAENDSSDQS 402
Query: 270 LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDT 449
+ +R+ S PV S F+ + +LSS D I++W + N + KGH
Sbjct: 403 IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYP 462
Query: 450 VTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
V S G Y S S D T RIW + P +++M+GH
Sbjct: 463 VWDAQFSPFGHYFASCSHDRTARIWSMDRIQP----LRIMAGH 501
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK- 182
I++W++ + + GH + L +S +GS L +G+ D TV +WDV + T++ K +
Sbjct: 565 IMMWDL-STARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEE 623
Query: 183 --GHANFVNSV 209
G++N + S+
Sbjct: 624 KNGNSNRLRSL 634
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 80.6 bits (190), Expect = 8e-16
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
GH A++ + FSPDG L +G+ D TV +WD+ T T + KGH N+V +V+ + G
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKH- 165
Query: 237 LVSASDDNTIKLWDARK----RNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 395
LVS S I W+ +K +P+ S V + + ++S D ++
Sbjct: 166 LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARI 225
Query: 396 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSG 575
WDI + + + GHT VT + DG + + S D T+++W+ + ++ + G
Sbjct: 226 WDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWE----TTQGKLIRELKG 280
Query: 576 HQH 584
H H
Sbjct: 281 HGH 283
Score = 74.5 bits (175), Expect = 5e-14
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Frame = +3
Query: 108 LYTGATDNTVAVWDVPTGTRIKK-LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 284
L +G+ D T+ +W+ + KK L GH VN V + G + + SAS D +++LW+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDG-KWIASASFDKSVRLWNGI 390
Query: 285 KRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 461
V F PV V ++ + +LS D+ +K+W+IR ++ + GH D V +
Sbjct: 391 TGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAV 450
Query: 462 SLSWDGAYLLSNSMDNTLRIW 524
S DG ++S D L++W
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLW 471
Score = 71.7 bits (168), Expect = 4e-13
Identities = 46/173 (26%), Positives = 92/173 (53%), Gaps = 1/173 (0%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
IW++ + ++++ + GHT A+ + + DG +YTG+ D T+ +W+ G I++LKGH
Sbjct: 225 IWDITLK-KSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHG 282
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 371
+++NS+ A +L + + D+T + + + A Y T D+ E+++S
Sbjct: 283 HWINSL--ALSTEYVLRTGAFDHTGRQYPPNEEKQKAL--ERYNKTK---GDSPERLVSG 335
Query: 372 GVDNVIKMWDIR-NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
D + +W+ + Q ++ GH V + S DG ++ S S D ++R+W+
Sbjct: 336 SDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 67.3 bits (157), Expect = 8e-12
Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
I +W Q + + +KGH I L S + L TGA D+T + P + K L+
Sbjct: 264 IKMWETT-QGKLIRELKGHGHWINSLALSTEYV-LRTGAFDHTGRQYP-PNEEKQKALER 320
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDAR-KRNPVASFDSSYP-VTSVLFNDTAEK 359
+ N G PE LVS SDD T+ LW+ + P V V F+ +
Sbjct: 321 Y----NKTKGD--SPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKW 374
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
I S+ D +++W+ Q +GH V +S S D LLS S D+TL+IW++R
Sbjct: 375 IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR 432
Score = 65.3 bits (152), Expect = 3e-11
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG-TRIKKLK 182
+ +W++Y + + KGH ++ + +SPDG HL +G+ + W+ G L
Sbjct: 133 VRLWDLYTETP-LFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLT 191
Query: 183 GHANFVNSVSGA---RRGP-ELLVSASDDNTIKLWD-ARKRNPVASFDSSYPVTSVLFND 347
GH ++ +S P V++S D ++WD K++ + + VT V +
Sbjct: 192 GHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGG 251
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 518
I + D IKMW+ ++ ++KGH + L+LS + L + + D+T R
Sbjct: 252 DG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE-YVLRTGAFDHTGR 306
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 6 ILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +WN + GQ V V +GH G + Q+ +S D L +G+ D+T+ +W++ T + L
Sbjct: 384 VRLWNGITGQF--VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLW 275
GHA+ V +V + G E +VS D +KLW
Sbjct: 442 GHADEVFAVDWSPDG-EKVVSGGKDRVLKLW 471
Score = 41.1 bits (92), Expect = 6e-04
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +3
Query: 411 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHNF 590
N+ S I GH + V +S S DG L S S D T+R+WD+ P C GH+ N+
Sbjct: 99 NRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTC----KGHK-NW 153
Query: 591 EKNLLRCAWS 620
+L AWS
Sbjct: 154 ---VLTVAWS 160
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 80.2 bits (189), Expect = 1e-15
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
+ GH+ + + S DG +G+ D + +WD+ TG ++ GH V SV+ +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 231 ELLVSASDDNTIKLWDA--RKRNPVASFDSSYP-VTSVLF--NDTAEKILSSGVDNVIKM 395
++ VSAS D TIKLW+ + ++ D V+ V F N I+S+ D +K+
Sbjct: 119 QI-VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 396 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
W+++N ++ + GH+ + +++S DG+ S D + +WD+
Sbjct: 178 WNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Score = 57.6 bits (133), Expect = 6e-09
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Frame = +3
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP---VAS---FDSSYPVTSVL 338
++ H + V +++ +++V+AS D +I LW K + VA S+ V V+
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV 70
Query: 339 FNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 518
+ + LS D +++WD+ + + + GHT V ++ S D ++S S D T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 519 IWD 527
+W+
Sbjct: 131 LWN 133
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/98 (24%), Positives = 52/98 (53%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ +WN+ C+ + GH+G + + SPDGS +G D + +WD+ G ++ L+
Sbjct: 175 VKVWNLQN-CKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV 299
+ ++S+ + + A+ +N+I++WD ++ V
Sbjct: 234 -GSIIHSLCFSPN--RYWLCAATENSIRIWDLESKSVV 268
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +3
Query: 345 DTAEKILSSGVDNVIKMWDIRNNQISL-----KIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
D ++ I+++ D I +W + + S ++ GH+ V + LS DG + LS S D
Sbjct: 26 DNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 85
Query: 510 TLRIWDVRPFAPTERCV 560
LR+WD+ T R V
Sbjct: 86 ELRLWDLATGETTRRFV 102
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQ-LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
IL+W++ E + G+I+ LCFSP+ L AT+N++ +WD+ + + ++ LK
Sbjct: 217 ILLWDL---AEGKKLYSLEAGSIIHSLCFSPNRYWL-CAATENSIRIWDLESKSVVEDLK 272
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDV 152
L +S DGS L++G TD V VW +
Sbjct: 300 LNWSADGSTLFSGYTDGVVRVWGI 323
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 79.0 bits (186), Expect = 2e-15
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
++KGH GA++ F+ DG++ T D T+ +W+ G IK K H V V
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 228 PELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
+ S D + WD + F V +V FND++ ++S+G D +++WD
Sbjct: 73 AK-FCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDC 131
Query: 405 RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
R++ + T T +S+ ++ S+D T+R +D+R
Sbjct: 132 RSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMR 174
Score = 69.7 bits (163), Expect = 1e-12
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 3/177 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
I +WN + + K H + + + D + + D V WDV TG I+K +G
Sbjct: 42 IRLWNPHRGIL-IKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRG 100
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN--PVASFDSSY-PVTSVLFNDTAE 356
H VN+V ++VSA D ++++WD R + PV D+ V SV+ T
Sbjct: 101 HDGEVNAVK-FNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKT-- 157
Query: 357 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+I+ VD ++ +D+R + G V +S+S DG +L+ +D+TLR+ D
Sbjct: 158 EIIGGSVDGTVRTFDMRIGREMSDNLG--QPVNCISISNDGNCVLAGCLDSTLRLLD 212
Score = 46.4 bits (105), Expect = 2e-05
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Frame = +3
Query: 117 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 296
G+ D TV +D+ G + G VN +S + G +L D +T++L D
Sbjct: 162 GSVDGTVRTFDMRIGREMSDNLGQP--VNCISISNDGNCVLAGCLD-STLRLLDRTTGEL 218
Query: 297 VASF----DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 464
+ + S+ L N A ++ D ++ WD+ + ++ K + H VT +S
Sbjct: 219 LQVYKGHISKSFKTDCCLTNSDAH-VIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVS 277
Query: 465 LSWDGAYLLSNSMDNTLRIW 524
+L++S+D T+R+W
Sbjct: 278 YHPKEDCMLTSSVDGTIRVW 297
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL-LVSASDD 257
+ S DG+ + G D+T+ + D TG ++ KGH + + ++ S+D
Sbjct: 190 ISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSED 249
Query: 258 NTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 398
+ WD ++ F + VTSV ++ + +L+S VD I++W
Sbjct: 250 GLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQL--CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 209
E + V KGH + C + +H+ G+ D V WD+ + K + H V SV
Sbjct: 217 ELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSV 276
Query: 210 SGARRGPELLVSASDDNTIKLW 275
S + + ++++S D TI++W
Sbjct: 277 SYHPK-EDCMLTSSVDGTIRVW 297
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 78.2 bits (184), Expect = 4e-15
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 6/166 (3%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
+ GH+ + + S DG +G+ D + +WD+ G ++ GH V SV+ +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 231 ELLVSASDDNTIKLWDA--RKRNPVASFDSSYP--VTSVLF--NDTAEKILSSGVDNVIK 392
++ VSAS D TIKLW+ + ++ + V+ V F N I+S+ D +K
Sbjct: 119 QI-VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 393 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+W++ N ++ + GHT V+ +++S DG+ S D + +WD+
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Frame = +3
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS------SYPVTSVL 338
++ H + V +++ +++VSAS D +I LW K + S+ V V+
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 70
Query: 339 FNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 518
+ + LS D +++WD+ + + GHT V ++ S D ++S S D T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 130
Query: 519 IWD 527
+W+
Sbjct: 131 LWN 133
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/98 (25%), Positives = 52/98 (53%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ +WN+ C+ + GHTG + + SPDGS +G D V +WD+ G ++ L+
Sbjct: 176 VKVWNL-SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA 234
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV 299
+ + ++++ + + A+ ++ IK+WD ++ V
Sbjct: 235 N-SVIHALCFSPN--RYWLCAATEHGIKIWDLESKSIV 269
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +3
Query: 345 DTAEKILSSGVDNVIKMWDIRNNQISL-----KIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
D A+ I+S+ D I +W + + + ++ GH+ V + LS DG + LS S D
Sbjct: 26 DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 85
Query: 510 TLRIWDVRPFAPTERCV 560
LR+WD+ T R V
Sbjct: 86 ELRLWDLAAGVSTRRFV 102
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDV 152
L +S DGS L++G TD + VW +
Sbjct: 301 LNWSADGSTLFSGYTDGVIRVWGI 324
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 77.4 bits (182), Expect = 7e-15
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Frame = +3
Query: 102 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
+H+ + + V VWDV T + + + H SV +R P +LVS SDD +K+W
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 282 RKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQISLKI-KGHTDTVT 455
R+ V + D + V +N + ++ G D+ I +D+RN L + GH V+
Sbjct: 494 RQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVS 553
Query: 456 GLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHNFEKNLL 605
+ + L S S D+TLR+WDV+ P V+ GH + EKN +
Sbjct: 554 YVKFLSNNE-LASASTDSTLRLWDVKDNLP----VRTFRGHTN--EKNFV 596
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/175 (21%), Positives = 76/175 (43%), Gaps = 2/175 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFS-PDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W+V + +++M + H + FS + S L +G+ D V VW + +
Sbjct: 445 VTVWDVTTR-QSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINID 503
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFNDTAEK 359
AN + V + S D+ I +D R P+ F S + + +
Sbjct: 504 MKAN-ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNE 562
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ S+ D+ +++WD+++N +GHT+ + L+ + YL S N + ++
Sbjct: 563 LASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVY 617
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 77.0 bits (181), Expect = 9e-15
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
++ IW+VY + + GH A+ +CFS DGS T D + WD TG I
Sbjct: 306 KVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFS 365
Query: 183 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAE 356
G +V ++ +L++ D I WD +D V ++ F D
Sbjct: 366 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNR 425
Query: 357 KILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ ++S D +++W+ + I + H ++ +S+ +G +L + S+DN + I+ R
Sbjct: 426 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTR 485
Score = 44.0 bits (99), Expect = 8e-05
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +3
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV--ASFDSSYPVTSVLFNDTAE 356
GH V+++ + LL+SA D +K+WD + V + F++
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 357 KILSSGVDNVIKMWDIRNNQ-ISLKIKGHTDTVTGLSLSWDGA-YLLSNSMDNTLRIWDV 530
K L++G D IK WD Q IS G V L+ D LL+ D + WD+
Sbjct: 340 KFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDI 399
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = +3
Query: 57 GH--TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
GH G Q+ FSPDG + +G + WD + + LK H
Sbjct: 498 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQ 557
Query: 231 ELLVSASDDNTIKLWD 278
+ + D IK WD
Sbjct: 558 SKVATCGWDGLIKYWD 573
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 76.6 bits (180), Expect = 1e-14
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN--FVNSVSGA-----RRGPELLVS 245
FSPDG L + + D + VWD +G K L+ A+ F+ R E+L S
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLAS 280
Query: 246 ASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIS 422
S D IK+W R + FD+ S VTS+ F+ ++LS+ D ++ +++ ++
Sbjct: 281 GSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLL 340
Query: 423 LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+ +GHT V + DG+ +++ S D T+++WD
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 179
+I IW + G C + H+ + L FS DGS L + + D T + + +G +K+
Sbjct: 286 KIKIWRIRTGVC--IRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEF 343
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPV 326
+GH ++VN G +++AS D T+K+WD++ + + +F P+
Sbjct: 344 RGHTSYVNHAIFTSDGSR-IITASSDCTVKVWDSKTTDCLQTFKPPPPL 391
Score = 36.3 bits (80), Expect = 0.016
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = +3
Query: 339 FNDTAEKILSSGVDNVIKMWDIRNNQISLKIKG--------HTDTVTGLSLSWDGAYLLS 494
F+ + + SS VD I++WD + ++ ++ H D V + S D L S
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLAS 280
Query: 495 NSMDNTLRIWDVRPFAPTERCVKLMSGH 578
S D ++IW +R T C++ H
Sbjct: 281 GSQDGKIKIWRIR----TGVCIRRFDAH 304
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 75.8 bits (178), Expect = 2e-14
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Frame = +3
Query: 126 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 305
+ V VWDV + ++K H V S+ + P LL S SDD ++KLW + + +
Sbjct: 555 EGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGT 614
Query: 306 FDSSYPVTSVLF-NDTAEKILSSGVDNVIKMWDIRNNQISL-KIKGHTDTVTGLSLSWDG 479
+ + V F ++T + D+ + +D+RN ++ L + GH TV+ + D
Sbjct: 615 IKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DS 673
Query: 480 AYLLSNSMDNTLRIWDV 530
+ L+S+S DNTL++WD+
Sbjct: 674 STLVSSSTDNTLKLWDL 690
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 294 PVASFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL- 467
PV S ++ + +N + ++ SS + V+++WD+ NQ+ ++K H V +
Sbjct: 526 PVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYS 585
Query: 468 SWDGAYLLSNSMDNTLRIWDV 530
S D L S S D ++++W +
Sbjct: 586 SADPTLLASGSDDGSVKLWSI 606
Score = 35.9 bits (79), Expect = 0.022
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG------TRIKKLKGHANFVNSVS 212
M GH + + F D S L + +TDNT+ +WD+ T + GH N N V
Sbjct: 658 MIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV- 715
Query: 213 GARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEKILS 368
G + + S+ N + ++ PV S F + PV+ + +D ++ I S
Sbjct: 716 GLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISS 769
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 75.8 bits (178), Expect = 2e-14
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Frame = +3
Query: 126 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 305
+ V VWDV + ++K H V S+ + P LL S SDD ++KLW + + +
Sbjct: 555 EGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGT 614
Query: 306 FDSSYPVTSVLF-NDTAEKILSSGVDNVIKMWDIRNNQISL-KIKGHTDTVTGLSLSWDG 479
+ + V F ++T + D+ + +D+RN ++ L + GH TV+ + D
Sbjct: 615 IKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DS 673
Query: 480 AYLLSNSMDNTLRIWDV 530
+ L+S+S DNTL++WD+
Sbjct: 674 STLVSSSTDNTLKLWDL 690
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 294 PVASFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL- 467
PV S ++ + +N + ++ SS + V+++WD+ NQ+ ++K H V +
Sbjct: 526 PVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYS 585
Query: 468 SWDGAYLLSNSMDNTLRIWDV 530
S D L S S D ++++W +
Sbjct: 586 SADPTLLASGSDDGSVKLWSI 606
Score = 35.9 bits (79), Expect = 0.022
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG------TRIKKLKGHANFVNSVS 212
M GH + + F D S L + +TDNT+ +WD+ T + GH N N V
Sbjct: 658 MIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV- 715
Query: 213 GARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEKILS 368
G + + S+ N + ++ PV S F + PV+ + +D ++ I S
Sbjct: 716 GLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISS 769
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 75.4 bits (177), Expect = 3e-14
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Frame = +3
Query: 96 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 275
D HL +G D V WDV T I L GH ++V + +LV+ S D+T+K+W
Sbjct: 147 DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
Query: 276 DAR--KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD-IRNNQISLKIKGHTD 446
DAR N +A + PV V++ + I ++G N +K+WD I ++ ++ H
Sbjct: 207 DARVHTSNWIAEINHGLPVEDVVYLPSGGLIATAG-GNSVKVWDLIGGGKMVCSMESHNK 265
Query: 447 TVTGLSLS-WDGA--YLLSNSMDNTLRIWD 527
TVT L ++ + A L+S ++D ++++D
Sbjct: 266 TVTSLRVARMESAESRLVSVALDGYMKVFD 295
Score = 47.6 bits (108), Expect = 7e-06
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 248
++ L FSP H A TV+++ + + ++ + V+SV G L +
Sbjct: 54 SVAALAFSPVHPHSLAVAHSATVSLFSSQSLSSSRRFS-FRDVVSSVCFRSDGA-LFAAC 111
Query: 249 SDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQIS 422
++++D ++R + + S S P V + + ++S G D V+K WD+ +
Sbjct: 112 DLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVI 171
Query: 423 LKIKGHTDTVT-GLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ GH D V G + + L++ S D+T+++WD R
Sbjct: 172 SDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDAR 209
Score = 38.7 bits (86), Expect = 0.003
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Frame = +3
Query: 84 CFSPDGSHLYTGATDNTVAVWD--VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 257
C + S L TG+ D+TV VWD V T I ++ H V V G L++ +
Sbjct: 186 CSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEI-NHGLPVEDVVYLPSGG--LIATAGG 242
Query: 258 NTIKLWD-ARKRNPVASFDS-SYPVTS--VLFNDTAE-KILSSGVDNVIKMWDIRNNQIS 422
N++K+WD V S +S + VTS V ++AE +++S +D +K++D +++
Sbjct: 243 NSVKVWDLIGGGKMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAKVT 302
Query: 423 LKIKGHTDTVTGLSLSWDGA 482
++ + L LS DG+
Sbjct: 303 YSMR-FPAPLMSLGLSPDGS 321
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 74.5 bits (175), Expect = 5e-14
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 4/190 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
IL ++ Q + V + GH + L +S D L +G DN + VW+ + I KL
Sbjct: 279 ILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTE 338
Query: 186 HANFVNSVSGARRGPELLVS--ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK 359
H V +++ + LL S + D I+ W+ N + S D+ V ++ ++ +
Sbjct: 339 HTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNLAWSKNVNE 398
Query: 360 ILSSG--VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
I+S+ N I +W + + GH+ V L+ S DG +++ + D TLR W+V
Sbjct: 399 IVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVF 458
Query: 534 PFAPTERCVK 563
P + VK
Sbjct: 459 PSVKMQTPVK 468
Score = 51.6 bits (118), Expect = 4e-07
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 5/179 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ +W + G ++ + ++ +GS++ G + V VWD R++ + G
Sbjct: 196 VYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGG 255
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEK 359
H ++ R +L S S D I D R ++ S V + ++ +
Sbjct: 256 HQTRTGVLAWNSR---ILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRE 312
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSN---SMDNTLRIWD 527
+ S G DN + +W+ + Q LK+ HT V ++ S + LL++ + D +R W+
Sbjct: 313 LASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWN 371
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
QI++W Y V + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 409 QIMLWK-YPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 74.1 bits (174), Expect = 7e-14
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN----FVNSVSGARRGPELLVSA 248
+ + G ++ A + V +W V G K L ++ + S A L+
Sbjct: 24 IAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVG 82
Query: 249 SDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 425
D +I++WD K +F+S VT++ +N + S DN I +WD+
Sbjct: 83 YADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLF 142
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
+++GH D VT L G L+S+S D LR+WD+ T+ C++++SGH
Sbjct: 143 RLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLE----TQHCMQIVSGH 189
Score = 69.3 bits (162), Expect = 2e-12
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Frame = +3
Query: 12 IWNV-YGQCENVMVMKGHTG----AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 176
IW+V G C + G A+ + S S + G D ++ +WD GT
Sbjct: 43 IWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSAS-SLVAVGYADGSIRIWDTEKGTCEVN 101
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTA 353
H V ++ + G +L S S DN I LWD + + VT ++F D
Sbjct: 102 FNSHKGAVTALRYNKVG-SMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGG 160
Query: 354 EKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+K++SS D +++WD+ + GH V + + Y+++ S D LR + V+
Sbjct: 161 KKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVK 220
Query: 534 PFA 542
++
Sbjct: 221 EYS 223
Score = 66.9 bits (156), Expect = 1e-11
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
NV MK + ++ + SPD H+ D+TV V+ + + L GH V + +
Sbjct: 533 NVKSMKMNDD-VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDIS 591
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVAS-FDSSYPVTSVLFNDTAEKILSSGVDNVIKM 395
G EL+V+ S D +K+W + S F V V F + S G D ++K
Sbjct: 592 SDG-ELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKY 650
Query: 396 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
WD + L ++GH + L++S G +L++ S D ++R WD
Sbjct: 651 WDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 46.8 bits (106), Expect = 1e-05
Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 12/183 (6%)
Frame = +3
Query: 27 GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS 206
G V +K H G I + P+ S T + D+ V W+ + K N
Sbjct: 475 GSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNV 534
Query: 207 VSGARRGPELLVSASDD----------NTIKLW--DARKRNPVASFDSSYPVTSVLFNDT 350
S L V+ S D +T+K++ D+ K ++ + PV + +
Sbjct: 535 KSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFY-LSLYGHKLPVMCIDISSD 593
Query: 351 AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
E I++ D +K+W + I H D+V G+ + YL S D ++ WD
Sbjct: 594 GELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDA 653
Query: 531 RPF 539
F
Sbjct: 654 DKF 656
Score = 30.7 bits (66), Expect = 0.81
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 149
E+++ ++GH I L S G L TG+ D ++ WD
Sbjct: 657 EHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 73.3 bits (172), Expect = 1e-13
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
F P + GA D + V++ T ++K + H++++ V+ P +L S+SDD I
Sbjct: 65 FIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVL-SSSDDMLI 123
Query: 267 KLWDARKRNPVAS-FDS-SYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRNNQISLKIKG 437
KLWD F+ S+ V V+FN S+ +D IK+W++ + + +
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
Query: 438 HTDTVTGLSL--SWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
H V + D YL++ S D+T ++WD + T+ CV+ + GH HN
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ----TKSCVQTLDGHTHN 231
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 182
I ++N Y + V V + H+ I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE 139
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK 359
GH+++V V + SAS D TIK+W+ +P + D+ V V + +K
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 360 --ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+++ D+ K+WD + + GHT V+ + + +++ S D T+RIW
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKL 179
I IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L
Sbjct: 167 IKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
GH + V++V P ++++ S+D T+++W A
Sbjct: 226 DGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/102 (30%), Positives = 47/102 (46%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W+ Y V + GHT + +CF P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS 317
V ++ G + +V D+ TI + R+ PVAS DSS
Sbjct: 272 ERVWAI-GYIKSSRRVVIGYDEGTIMVKLGRE-IPVASMDSS 311
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 347
+K + V SV P +L S T+ +W+ + + SF+ + PV S F
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYS-GTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ +++ D I++++ N +K+ + H+D + +++ Y+LS+S D +++W
Sbjct: 68 RKQWVVAGADDMYIRVYNY-NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 525 DVRPFAPTERCVKLMSGHQH 584
D + C ++ GH H
Sbjct: 127 D---WENGWACTQIFEGHSH 143
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 73.3 bits (172), Expect = 1e-13
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
F P + GA D + V++ T ++K + H++++ V+ P +L S+SDD I
Sbjct: 65 FIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVL-SSSDDMLI 123
Query: 267 KLWDARKRNPVAS-FDS-SYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRNNQISLKIKG 437
KLWD F+ S+ V V+FN S+ +D IK+W++ + + +
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
Query: 438 HTDTVTGLSL--SWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
H V + D YL++ S D+T ++WD + T+ CV+ + GH HN
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ----TKSCVQTLDGHTHN 231
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 182
I ++N Y + V V + H+ I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE 139
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK 359
GH+++V V + SAS D TIK+W+ +P + D+ V V + +K
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 360 --ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+++ D+ K+WD + + GHT V+ + + +++ S D T+RIW
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKL 179
I IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L
Sbjct: 167 IKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
GH + V++V P ++++ S+D T+++W A
Sbjct: 226 DGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/102 (30%), Positives = 47/102 (46%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W+ Y V + GHT + +CF P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS 317
V ++ G + +V D+ TI + R+ PVAS DSS
Sbjct: 272 ERVWAI-GYIKSSRRVVIGYDEGTIMVKLGRE-IPVASMDSS 311
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 347
+K + V SV P +L S T+ +W+ + + SF+ + PV S F
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYS-GTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ +++ D I++++ N +K+ + H+D + +++ Y+LS+S D +++W
Sbjct: 68 RKQWVVAGADDMYIRVYNY-NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 525 DVRPFAPTERCVKLMSGHQH 584
D + C ++ GH H
Sbjct: 127 D---WENGWACTQIFEGHSH 143
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 73.3 bits (172), Expect = 1e-13
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
F P + GA D + V++ T ++K + H++++ V+ P +L S+SDD I
Sbjct: 65 FIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVL-SSSDDMLI 123
Query: 267 KLWDARKRNPVAS-FDS-SYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRNNQISLKIKG 437
KLWD F+ S+ V V+FN S+ +D IK+W++ + + +
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
Query: 438 HTDTVTGLSL--SWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
H V + D YL++ S D+T ++WD + T+ CV+ + GH HN
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ----TKSCVQTLDGHTHN 231
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 182
I ++N Y + V V + H+ I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE 139
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK 359
GH+++V V + SAS D TIK+W+ +P + D+ V V + +K
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 360 --ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+++ D+ K+WD + + GHT V+ + + +++ S D T+RIW
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKL 179
I IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L
Sbjct: 167 IKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
GH + V++V P ++++ S+D T+++W A
Sbjct: 226 DGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/102 (30%), Positives = 47/102 (46%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W+ Y V + GHT + +CF P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS 317
V ++ G + +V D+ TI + R+ PVAS DSS
Sbjct: 272 ERVWAI-GYIKSSRRVVIGYDEGTIMVKLGRE-IPVASMDSS 311
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 347
+K + V SV P +L S T+ +W+ + + SF+ + PV S F
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYS-GTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ +++ D I++++ N +K+ + H+D + +++ Y+LS+S D +++W
Sbjct: 68 RKQWVVAGADDMYIRVYNY-NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 525 DVRPFAPTERCVKLMSGHQH 584
D + C ++ GH H
Sbjct: 127 D---WENGWACTQIFEGHSH 143
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Frame = +3
Query: 114 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 293
+G V +WD+ AN +S +GA L + N I + +
Sbjct: 144 SGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHG 203
Query: 294 --PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL 467
P + V ++ NDT ++S G + V+++WD R S+K++GHTD V L L
Sbjct: 204 YTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLL 263
Query: 468 SWDGAYLLSNSMDNTLRIWDV 530
G + LS S D+ +R+WD+
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDL 284
Score = 58.4 bits (135), Expect = 4e-09
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
+ KGH ++ L + G+ L +G T+ + VWD TG++ KL+GH + V + G
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 228 PELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
+S S D+ I+LWD ++ + ++ + V ++ N + + S G D + + D+
Sbjct: 268 -RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
Query: 405 RNNQ-ISLKIKGH 440
+ + L K H
Sbjct: 327 ATRESVLLCTKEH 339
Score = 48.4 bits (110), Expect = 4e-06
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 108 LYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 284
L T + N ++V P+ G KGH V +++ G +LVS + +++WD R
Sbjct: 185 LRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGT-MLVSGGTEKVLRVWDPR 243
Query: 285 KRNPVASFDSSYPVTSVLFNDTAEKI-LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 461
+ VL D+ + LS D++I++WD+ + HTD+V L
Sbjct: 244 TGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWAL 303
Query: 462 SLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVK 563
+ + +++ S D L + D+ C K
Sbjct: 304 ACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTK 337
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 245
+++ S D S+L+TG+ D T+ W D + H ++VN + A G LVS
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA--GESTLVS 100
Query: 246 ASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
S D T+K WD S Y + + S G+ + +WDI
Sbjct: 101 CSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 35.5 bits (78), Expect = 0.029
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 224
M ++GHT + L G +G++D+ + +WD+ G + + L +A +SV
Sbjct: 249 MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL--GQQ-RCLHTYAVHTDSVWALAC 305
Query: 225 GPEL--LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
P + S D + L D R V +P+ + D + I + D+ ++ W
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNS--IWVATTDSSVERW 363
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Frame = +3
Query: 114 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 293
+G V +WD+ AN +S +GA L + N I + +
Sbjct: 144 SGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHG 203
Query: 294 --PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL 467
P + V ++ NDT ++S G + V+++WD R S+K++GHTD V L L
Sbjct: 204 YTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLL 263
Query: 468 SWDGAYLLSNSMDNTLRIWDV 530
G + LS S D+ +R+WD+
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDL 284
Score = 58.4 bits (135), Expect = 4e-09
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
+ KGH ++ L + G+ L +G T+ + VWD TG++ KL+GH + V + G
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 228 PELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
+S S D+ I+LWD ++ + ++ + V ++ N + + S G D + + D+
Sbjct: 268 -RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
Query: 405 RNNQ-ISLKIKGH 440
+ + L K H
Sbjct: 327 ATRESVLLCTKEH 339
Score = 48.4 bits (110), Expect = 4e-06
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 108 LYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 284
L T + N ++V P+ G KGH V +++ G +LVS + +++WD R
Sbjct: 185 LRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGT-MLVSGGTEKVLRVWDPR 243
Query: 285 KRNPVASFDSSYPVTSVLFNDTAEKI-LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 461
+ VL D+ + LS D++I++WD+ + HTD+V L
Sbjct: 244 TGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWAL 303
Query: 462 SLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVK 563
+ + +++ S D L + D+ C K
Sbjct: 304 ACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTK 337
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 245
+++ S D S+L+TG+ D T+ W D + H ++VN + A G LVS
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA--GESTLVS 100
Query: 246 ASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
S D T+K WD S Y + + S G+ + +WDI
Sbjct: 101 CSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 35.5 bits (78), Expect = 0.029
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 224
M ++GHT + L G +G++D+ + +WD+ G + + L +A +SV
Sbjct: 249 MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL--GQQ-RCLHTYAVHTDSVWALAC 305
Query: 225 GPEL--LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
P + S D + L D R V +P+ + D + I + D+ ++ W
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNS--IWVATTDSSVERW 363
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 73.3 bits (172), Expect = 1e-13
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Frame = +3
Query: 117 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 296
GA D + V++ T +IK + HA+++ V+ P +L S+SDD IKLWD K
Sbjct: 75 GADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVL-SSSDDMLIKLWDWEKGWL 133
Query: 297 VAS-FDS-SYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL 467
F+ S+ V V FN S+ +D IK+W++ + + + H V +
Sbjct: 134 CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDY 193
Query: 468 --SWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
D YL++ S D+T ++WD + T+ CV+ + GH HN
Sbjct: 194 FTGGDKPYLITGSDDHTAKVWDYQ----TKSCVQTLEGHTHN 231
Score = 71.3 bits (167), Expect = 5e-13
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 182
I ++N Y + + V + H I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFE 139
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK 359
GH+++V V+ + SAS D TIK+W+ +P + D+ V V + +K
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDK 199
Query: 360 --ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+++ D+ K+WD + ++GHT V+ +S + +++ S D T+RIW
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKL 179
I IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L
Sbjct: 167 IKIWNL-GSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
+GH + V++VS P ++++ S+D T+++W A
Sbjct: 226 EGHTHNVSAVSFHPELP-IIITGSEDGTVRIWHA 258
Score = 44.4 bits (100), Expect = 6e-05
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 347
+K + V SV P +L S T+ +W+ + + V SFD + PV S F
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYS-GTLCIWNYQTQTMVKSFDVTELPVRSAKFIA 67
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ +++ D I++++ N +K+ + H D + +++ Y+LS+S D +++W
Sbjct: 68 RKQWVVAGADDMFIRVYNY-NTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 525 DVRPFAPTERCVKLMSGHQH 584
D + C ++ GH H
Sbjct: 127 D---WEKGWLCTQIFEGHSH 143
Score = 41.5 bits (93), Expect = 4e-04
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W+ Y V ++GHT + + F P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDT-AEKILS 368
V ++ G +G +V D+ +I + R+ PVAS D+S + N+ I S
Sbjct: 272 ERVWAI-GHIKGSRRVVIGYDEGSIMVKLGRE-IPVASMDNSGKIIWAKHNEIHTVNIKS 329
Query: 369 SGVDNV 386
G D V
Sbjct: 330 VGADEV 335
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
QI +W++ + + KGH G +M + G L T D V VWDV G +
Sbjct: 83 QIRVWDLE-TLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFR 141
Query: 183 GHANFVNSV-SGARRGPELLVSASDDNTIKLWDARKRNP----VASFDSSY-PVTSVLFN 344
GH V+S+ +L+S SDD T+++WD +N +A + + VTS+ +
Sbjct: 142 GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS 201
Query: 345 DTAEKILSSGVDNVIKMWDIRN 410
+ + S+G D V+ +WD+ +
Sbjct: 202 EDGLTLFSAGRDKVVNLWDLHD 223
Score = 71.7 bits (168), Expect = 4e-13
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
++G + + L SPD L++ + VWD+ T I+ KGH V ++ G
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASG- 114
Query: 231 ELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFN-DTAEKILSSGVDN-VIKMWD 401
LL +A D + +WD F V+S+LF+ D+ + IL SG D+ +++WD
Sbjct: 115 GLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
Query: 402 IRNNQISLK----IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFA 542
+ K ++ H VT ++LS DG L S D + +WD+ ++
Sbjct: 175 LNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYS 225
Score = 66.5 bits (155), Expect = 1e-11
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 12/204 (5%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDV---------P 155
+ +WN + + V GH G I+ + F+ S +G+ D T+ VW + P
Sbjct: 428 VRLWNATSK-SCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEP 486
Query: 156 TGTRIKKL-KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVT 329
+ + + H +NSV+ AR L+ + S+D T +W V + +
Sbjct: 487 INLKTRSVVAAHDKDINSVAVARND-SLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIF 545
Query: 330 SVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
SV F+ + ++++ D +K+W I + +GHT +V S DG +S D
Sbjct: 546 SVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADG 605
Query: 510 TLRIWDVRPFAPTERCVKLMSGHQ 581
L++W+V T C+ H+
Sbjct: 606 LLKLWNVN----TSECIATYDQHE 625
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
V+ H I + + + S + TG+ D T ++W +P + LKGH + SV +
Sbjct: 494 VVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVD 553
Query: 228 PELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
+ +++AS D T+K+W + + +F+ + V F + +S G D ++K+W++
Sbjct: 554 -QCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNV 612
Query: 405 RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
++ H D V L++ + + D + +W
Sbjct: 613 NTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 62.5 bits (145), Expect = 2e-10
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Frame = +3
Query: 48 VMKGHTGAIMQL--CFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
V+ GH ++ L C S G+ L TG+ D TV +W+ + + I GH + +V+ A
Sbjct: 396 VLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Query: 219 RRGPELLVSASDDNTIKLW-------------DARKRNPVASFDSSYPVTSVLFNDTAEK 359
++ VS S D T+K+W + + R+ VA+ D +V ND+
Sbjct: 456 KKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSL-- 513
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
+ + D +W + + + +KGH + + S +++ S D T++IW +
Sbjct: 514 VCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDG 573
Query: 540 APTERCVKLMSGH 578
+ C+K GH
Sbjct: 574 S----CLKTFEGH 582
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 269
S DGS + D + + D + ++G ++ + +++ +LL SA I+
Sbjct: 28 SSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDTLTALA-LSPDDKLLFSAGHSRQIR 85
Query: 270 LWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTD 446
+WD + S+ PV + + + + ++G D + +WD+ + +GH
Sbjct: 86 VWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKG 145
Query: 447 TVTGLSLSWDGA--YLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
V+ + D L+S S D T+R+WD+ ++C+ +M H
Sbjct: 146 VVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKH 191
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +3
Query: 381 NVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCV 560
+VI + D ++ + I+G +DT+T L+LS D L S +R+WD+ T +C+
Sbjct: 40 DVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLE----TLKCI 95
Query: 561 KLMSGHQ 581
+ GH+
Sbjct: 96 RSWKGHE 102
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 6 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ IW + G C + +GHT ++++ F DG+ + D + +W+V T I
Sbjct: 565 VKIWAISDGSC--LKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYD 622
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLW 275
H + V +++ ++ E++ + D I LW
Sbjct: 623 QHEDKVWALAVGKK-TEMIATGGGDAVINLW 652
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND 347
+K+ G F+ S G+ ++ + + I + D+ + ++ + + L
Sbjct: 16 LKQFYGGGPFIVSSDGS------FIACACGDVINIVDSTDSSVKSTIEGESDTLTALALS 69
Query: 348 TAEKIL-SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+K+L S+G I++WD+ + KGH V G++ G L + D + +W
Sbjct: 70 PDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVW 129
Query: 525 DV 530
DV
Sbjct: 130 DV 131
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 72.9 bits (171), Expect = 2e-13
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Frame = +3
Query: 3 QILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKK 176
++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 531 KVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 588
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 356
+ GHA V S+ + ELL S +N I+ WD A +S T V F
Sbjct: 589 ISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTG 645
Query: 357 KILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ L++ +N + ++DI NN + I KGH+ V + S +G + S S D +++W +
Sbjct: 646 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSL 703
Score = 71.3 bits (167), Expect = 5e-13
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLK 182
I W++ C V +KG A Q+ F P A++NTV+++D+ R+ K
Sbjct: 618 IRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK 672
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEK 359
GH++ V+SV + G EL+ S S+D +KLW + + +S SV+F+ +
Sbjct: 673 GHSSNVHSVCWSPNG-ELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 730
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+L G I++W+ N+ + + GH ++ L+ S + S S D +++IW
Sbjct: 731 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
Score = 53.2 bits (122), Expect = 1e-07
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 574
Query: 267 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 437
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 575 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 633
Query: 438 HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
+ V + G +L + S +NT+ I+D+ + V + GH N
Sbjct: 634 ASTQVRFQPRT--GQFLAAAS-ENTVSIFDIE---NNNKRVNIFKGHSSN 677
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 72.9 bits (171), Expect = 2e-13
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Frame = +3
Query: 3 QILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKK 176
++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 533 KVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 590
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 356
+ GHA V S+ + ELL S +N I+ WD A +S T V F
Sbjct: 591 ISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTG 647
Query: 357 KILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ L++ +N + ++DI NN + I KGH+ V + S +G + S S D +++W +
Sbjct: 648 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSL 705
Score = 71.3 bits (167), Expect = 5e-13
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLK 182
I W++ C V +KG A Q+ F P A++NTV+++D+ R+ K
Sbjct: 620 IRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK 674
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEK 359
GH++ V+SV + G EL+ S S+D +KLW + + +S SV+F+ +
Sbjct: 675 GHSSNVHSVCWSPNG-ELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 732
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+L G I++W+ N+ + + GH ++ L+ S + S S D +++IW
Sbjct: 733 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 53.2 bits (122), Expect = 1e-07
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 576
Query: 267 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 437
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 438 HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
+ V + G +L + S +NT+ I+D+ + V + GH N
Sbjct: 636 ASTQVRFQPRT--GQFLAAAS-ENTVSIFDIE---NNNKRVNIFKGHSSN 679
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 72.9 bits (171), Expect = 2e-13
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Frame = +3
Query: 3 QILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKK 176
++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 533 KVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 590
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 356
+ GHA V S+ + ELL S +N I+ WD A +S T V F
Sbjct: 591 ISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTG 647
Query: 357 KILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ L++ +N + ++DI NN + I KGH+ V + S +G + S S D +++W +
Sbjct: 648 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSL 705
Score = 71.3 bits (167), Expect = 5e-13
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLK 182
I W++ C V +KG A Q+ F P A++NTV+++D+ R+ K
Sbjct: 620 IRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK 674
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEK 359
GH++ V+SV + G EL+ S S+D +KLW + + +S SV+F+ +
Sbjct: 675 GHSSNVHSVCWSPNG-ELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 732
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+L G I++W+ N+ + + GH ++ L+ S + S S D +++IW
Sbjct: 733 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 53.2 bits (122), Expect = 1e-07
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 576
Query: 267 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 437
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 438 HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
+ V + G +L + S +NT+ I+D+ + V + GH N
Sbjct: 636 ASTQVRFQPRT--GQFLAAAS-ENTVSIFDIE---NNNKRVNIFKGHSSN 679
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 72.9 bits (171), Expect = 2e-13
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Frame = +3
Query: 3 QILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKK 176
++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 533 KVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 590
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 356
+ GHA V S+ + ELL S +N I+ WD A +S T V F
Sbjct: 591 ISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTG 647
Query: 357 KILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ L++ +N + ++DI NN + I KGH+ V + S +G + S S D +++W +
Sbjct: 648 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSL 705
Score = 71.3 bits (167), Expect = 5e-13
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLK 182
I W++ C V +KG A Q+ F P A++NTV+++D+ R+ K
Sbjct: 620 IRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK 674
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEK 359
GH++ V+SV + G EL+ S S+D +KLW + + +S SV+F+ +
Sbjct: 675 GHSSNVHSVCWSPNG-ELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 732
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+L G I++W+ N+ + + GH ++ L+ S + S S D +++IW
Sbjct: 733 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 53.2 bits (122), Expect = 1e-07
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 576
Query: 267 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 437
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 438 HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
+ V + G +L + S +NT+ I+D+ + V + GH N
Sbjct: 636 ASTQVRFQPRT--GQFLAAAS-ENTVSIFDIE---NNNKRVNIFKGHSSN 679
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 72.9 bits (171), Expect = 2e-13
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Frame = +3
Query: 3 QILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKK 176
++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 533 KVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 590
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 356
+ GHA V S+ + ELL S +N I+ WD A +S T V F
Sbjct: 591 ISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTG 647
Query: 357 KILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ L++ +N + ++DI NN + I KGH+ V + S +G + S S D +++W +
Sbjct: 648 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSL 705
Score = 71.3 bits (167), Expect = 5e-13
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLK 182
I W++ C V +KG A Q+ F P A++NTV+++D+ R+ K
Sbjct: 620 IRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK 674
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEK 359
GH++ V+SV + G EL+ S S+D +KLW + + +S SV+F+ +
Sbjct: 675 GHSSNVHSVCWSPNG-ELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 732
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+L G I++W+ N+ + + GH ++ L+ S + S S D +++IW
Sbjct: 733 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 53.2 bits (122), Expect = 1e-07
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 576
Query: 267 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 437
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 438 HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
+ V + G +L + S +NT+ I+D+ + V + GH N
Sbjct: 636 ASTQVRFQPRT--GQFLAAAS-ENTVSIFDIE---NNNKRVNIFKGHSSN 679
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/99 (32%), Positives = 60/99 (60%)
Frame = +3
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 413
L++SA +K+WD +KR + +D + ++++ + + D VI+++D+
Sbjct: 488 LMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTL 547
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
++ + +GHTD +T L S DG +++S+SMD +LRIWDV
Sbjct: 548 KMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDV 586
Score = 49.2 bits (112), Expect = 2e-06
Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Frame = +3
Query: 117 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 296
G+ + + +W++ T + + KG + V S + + + +D I + + +
Sbjct: 157 GSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGK-IHVHNIKLDEE 215
Query: 297 VASFD--SSYPVTSVLFNDTAEKILSSGVD-NVIKMWDIRNNQISLKIK-GHTDTVTGLS 464
+ +F+ S VT++ F+ +L+SG VI +W++ ++ I+ H ++ L+
Sbjct: 216 IVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLN 275
Query: 465 LSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
+ L+S S DN+L++W R ++ SGH
Sbjct: 276 FLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGH 313
Score = 44.0 bits (99), Expect = 8e-05
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGA 218
V +GHT I LCFS DG + + + D ++ +WDV +I + H + + ++S +
Sbjct: 550 VREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGV--HVDVPITALSLS 607
Query: 219 RRGPELLVSASDDNTIKLW 275
L + SD N + LW
Sbjct: 608 PNMDVLATAHSDQNGVYLW 626
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/98 (20%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +3
Query: 108 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 287
L T A D + ++DV T +++ +GH + + + + G + ++S+S D ++++WD
Sbjct: 530 LATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDG-KWVISSSMDGSLRIWDVIL 588
Query: 288 RNPVASFDSSYPVTSVLFNDTAEKILSSGVD-NVIKMW 398
+ P+T++ + + + ++ D N + +W
Sbjct: 589 AKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVYLW 626
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-- 179
I IWN+ + ++ H +I+ L F + L + + DN++ +W T +L
Sbjct: 249 ISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLR 308
Query: 180 --KGHANFVNSVSGARRGPELLVSASDDNTIKLW 275
GH+ + G +L SA D +L+
Sbjct: 309 FRSGHSAPPLCIRFYSNGRHIL-SAGQDRAFRLF 341
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 72.5 bits (170), Expect = 2e-13
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSH-----LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 212
++ GHT + L + P L +G+ D V VW++ G I+ LKGH V+
Sbjct: 61 ILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQ---MQVT 117
Query: 213 GARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVI 389
G E +VS+S D T+K W R V S+D+ P+ +V+ + E ++S D +
Sbjct: 118 GVAIDNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSGE-LVSGSSDASL 174
Query: 390 KMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
K+W + SL+ + GHTDTV GL++ D + LS S D ++R+W
Sbjct: 175 KLW---KGKTSLQTLSGHTDTVRGLAVMPDLGF-LSASHDGSIRLW 216
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
++ + GHT + L PD L + + D ++ +W + +G + ++ GH + V SV
Sbjct: 182 SLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLWAL-SGEVLLEMVGHTSLVYSVDAH 239
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
G L+VSAS+D K+W + V S + + F +T + I+++ D V+++W
Sbjct: 240 SSG--LIVSASEDRHAKIW--KDGVCVQSLEHPGCIWDAKFLETGD-IVTACSDGVVRVW 294
Query: 399 DIRNNQIS--LKIKGHTDTVTGLSLS 470
+R++ I+ ++I + ++ LS
Sbjct: 295 TVRHDAIADQMEIDAYDSQISQYKLS 320
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 399 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTE-RCVKLMSG 575
D ++ ++ GH D V G+ + D + ++S D T+R+W + P + K++ G
Sbjct: 6 DFNEYKLRCELHGHDDDVRGICVCND-ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLG 64
Query: 576 H 578
H
Sbjct: 65 H 65
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 72.5 bits (170), Expect = 2e-13
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSH-----LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 212
++ GHT + L + P L +G+ D V VW++ G I+ LKGH V+
Sbjct: 61 ILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQ---MQVT 117
Query: 213 GARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVI 389
G E +VS+S D T+K W R V S+D+ P+ +V+ + E ++S D +
Sbjct: 118 GVAIDNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSGE-LVSGSSDASL 174
Query: 390 KMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
K+W + SL+ + GHTDTV GL++ D + LS S D ++R+W
Sbjct: 175 KLW---KGKTSLQTLSGHTDTVRGLAVMPDLGF-LSASHDGSIRLW 216
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
++ + GHT + L PD L + + D ++ +W + +G + ++ GH + V SV
Sbjct: 182 SLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLWAL-SGEVLLEMVGHTSLVYSVDAH 239
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
G L+VSAS+D K+W + V S + + F +T + I+++ D V+++W
Sbjct: 240 SSG--LIVSASEDRHAKIW--KDGVCVQSLEHPGCIWDAKFLETGD-IVTACSDGVVRVW 294
Query: 399 DIRNNQIS--LKIKGHTDTVTGLSLS 470
+R++ I+ ++I + ++ LS
Sbjct: 295 TVRHDAIADQMEIDAYDSQISQYKLS 320
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 399 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTE-RCVKLMSG 575
D ++ ++ GH D V G+ + D + ++S D T+R+W + P + K++ G
Sbjct: 6 DFNEYKLRCELHGHDDDVRGICVCND-ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLG 64
Query: 576 H 578
H
Sbjct: 65 H 65
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGH---TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 176
+++WN CE++ ++KGH T + L + + S +G+ D +V + ++ TG +
Sbjct: 221 LIVWNPK-TCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSS 279
Query: 177 LKGHANFVNSVSGARRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDT 350
L H + V V + + ++A+ D + +WD + P + VTS+ + T
Sbjct: 280 LNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGT 339
Query: 351 AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
++ + + + + +WD GH D V +S+S + +++S S+DNT R+++
Sbjct: 340 SKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFES 399
Query: 531 RPF 539
F
Sbjct: 400 SEF 402
Score = 59.3 bits (137), Expect = 2e-09
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 212
++V GH G + L SP D + + TG D+ +W + G +L GH + V+ ++
Sbjct: 61 DSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLA 120
Query: 213 GARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVI 389
+ G +LL S D ++++DA D + V ++ +L+ D +
Sbjct: 121 FSYDG-QLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSL 179
Query: 390 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLM 569
MW+ GH VT + DG + + S D +L +W+ + T + ++
Sbjct: 180 WMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPK----TCESIHIV 235
Query: 570 SGHQHNFE 593
GH ++ E
Sbjct: 236 KGHPYHTE 243
Score = 57.6 bits (133), Expect = 6e-09
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W + G + + GH ++ L FS DG L +G D V ++D +GT L G
Sbjct: 97 LWKI-GNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPG 155
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILS 368
+ V RG ++++ S+D ++ +W+A K + F + VT F + I +
Sbjct: 156 AGIEWVRWHPRG-HIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICT 214
Query: 369 SGVDNVIKMWDIRNNQISLKIKG---HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
D + +W+ + + +KG HT+ +T L ++ + + +S S D ++ I ++
Sbjct: 215 GSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNI--- 271
Query: 540 APTERCVKLMSGHQHNFE 593
T + V ++ H + E
Sbjct: 272 -VTGKVVSSLNSHTDSVE 288
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/93 (24%), Positives = 46/93 (49%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+++IW++ Q + H + L + +L TG + TV++WD G +
Sbjct: 310 KLIIWDL--QHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYH 367
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
GH + V ++S + +VS S DNT +++++
Sbjct: 368 GHQDAVQAIS-VSTNTDFIVSVSVDNTARVFES 399
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 72.5 bits (170), Expect = 2e-13
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Frame = +3
Query: 117 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 296
GA D + V++ T ++K + H++++ V+ P +L S+SDD IKLWD K
Sbjct: 75 GADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVL-SSSDDMLIKLWDWEKGWA 133
Query: 297 VAS-FDS-SYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL 467
F+ S+ V V FN S+ +D IK+W++ + + + H V +
Sbjct: 134 CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
Query: 468 --SWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHN 587
D YL++ S D+T ++WD + T+ CV+ + GH HN
Sbjct: 194 FTGGDKPYLITGSDDHTAKVWDYQ----TKSCVQTLEGHTHN 231
Score = 70.5 bits (165), Expect = 8e-13
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 182
I ++N Y + V V + H+ I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFE 139
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK 359
GH+++V V+ + SAS D TIK+W+ +P + D+ V V + +K
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 360 --ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+++ D+ K+WD + ++GHT V+ + + +++ S D T+RIW
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKL 179
I IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L
Sbjct: 167 IKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
+GH + V++V P ++++ S+D T+++W A
Sbjct: 226 EGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W+ Y V ++GHT + +CF P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND-TAEKILS 368
V ++ G + +V D+ TI + R+ PVAS D++ + N+ I S
Sbjct: 272 ERVWAI-GYIKSSRRVVIGYDEGTIMVKLGRE-IPVASMDNTGKIIWAKHNEIQTANIKS 329
Query: 369 SGVD 380
G D
Sbjct: 330 IGAD 333
Score = 41.9 bits (94), Expect = 3e-04
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 347
+KL + V SV P +L S T+ +W+ + + SF+ + PV S F
Sbjct: 9 RKLAQRSERVKSVDLHPTEPWILASLYS-GTLCIWNYQTQVMAKSFEVTELPVRSAKFVA 67
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ +++ D I++++ N +K+ + H+D + +++ Y+LS+S D +++W
Sbjct: 68 RKQWVVAGADDMYIRVYNY-NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 525 DVRPFAPTERCVKLMSGHQH 584
D + C ++ GH H
Sbjct: 127 D---WEKGWACTQIFEGHSH 143
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 72.1 bits (169), Expect = 3e-13
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRG 227
++ HT I + FSP L T + D TV VWD G ++ GH++ V S+
Sbjct: 689 LEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIK 748
Query: 228 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 407
+L+ S +DN I+ W + + T + F K L++ N++ + D+
Sbjct: 749 DDLICSCDNDNEIRYWSINNGSCTRVYKGG--STQIRFQPRVGKYLAASSANLVNVLDVE 806
Query: 408 NNQISLKIKGHTDTVTGLSLSWD--GAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQ 581
I ++GH + + S+ WD G +L S S D +++W + + E CV +S +
Sbjct: 807 TQAIRHSLQGHANPIN--SVCWDPSGDFLASVSED-MVKVWTLGTGSEGE-CVHELSCNG 862
Query: 582 HNFEKNLLRCAW 617
+ F+ + A+
Sbjct: 863 NKFQSCVFHPAY 874
Score = 53.2 bits (122), Expect = 1e-07
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Frame = +3
Query: 3 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 179
+I W++ G C V + G Q+ F P ++ N V V DV T L
Sbjct: 760 EIRYWSINNGSCTRV-----YKGGSTQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSL 814
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLW---DARKRNPVASFD-SSYPVTSVLFND 347
+GHAN +NSV G + L S S+D +K+W + V + S +F+
Sbjct: 815 QGHANPINSVCWDPSG-DFLASVSED-MVKVWTLGTGSEGECVHELSCNGNKFQSCVFHP 872
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+L G +++W++ N+ ++ + H +T L++S + S S D +++W
Sbjct: 873 AYPSLLVIGCYQSLELWNMSENK-TMTLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
Score = 44.4 bits (100), Expect = 6e-05
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE--LLVSASDDN 260
FS DG L + D +W T L+ H + + R P L ++S D
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDI---RFSPSQLRLATSSFDK 715
Query: 261 TIKLWDA-RKRNPVASF-DSSYPVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKI 431
T+++WDA K + +F S VTS+ F+ + ++ S DN I+ W I N +
Sbjct: 716 TVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVY 775
Query: 432 KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
KG + + G YL ++S N + + DV
Sbjct: 776 KGGSTQIRFQPRV--GKYLAASSA-NLVNVLDV 805
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 71.3 bits (167), Expect = 5e-13
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR------IKKLKGHANFVN 203
V +GHT + L +S G L +G DN V +WD + + +L+ H + V
Sbjct: 259 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 318
Query: 204 SVSGARRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG- 374
+++ LL + D TIK W+ + S D+ V S+L++ ++LSS
Sbjct: 319 ALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHG 378
Query: 375 -VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
N + +W + ++ GHT V ++ S DG + S + D TLR W+V
Sbjct: 379 FTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 57.6 bits (133), Expect = 6e-09
Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 13/187 (6%)
Frame = +3
Query: 6 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W+ G ++ + G + + ++PDG H+ G ++ V +WD + +++ LK
Sbjct: 162 VYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLK 221
Query: 183 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTA 353
GH + V S++ +L + D I D R R+P+ + V + ++ +
Sbjct: 222 GGHQSRVGSLAW---NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSG 278
Query: 354 EKILSSGVDNVIKMWD---IRNNQISL---KIKGHTDTVTGLSLSWDGAYLLS---NSMD 506
+++ S G DNV+ +WD +N + +++ HT V L+ A LL+ D
Sbjct: 279 QQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGD 338
Query: 507 NTLRIWD 527
T++ W+
Sbjct: 339 RTIKFWN 345
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Frame = +3
Query: 120 ATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 293
A D+TV +WD TG + + + V S++ A G + V +++ ++LWD+
Sbjct: 157 ALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGL-NNSEVQLWDSASNR 215
Query: 294 PVASFDSSYP--VTSVLFNDTAEKILSSGVDNVIKMWDIR-NNQISLKIKGHTDTVTGLS 464
+ + + V S+ +N+ + + G+D +I D+R + I +GHT V GL
Sbjct: 216 QLRTLKGGHQSRVGSLAWNN--HILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLK 273
Query: 465 LSWDGAYLLSNSMDNTLRIWD 527
S G L S DN + IWD
Sbjct: 274 WSGSGQQLASGGNDNVVHIWD 294
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +3
Query: 255 DNTIKLWDAR--KRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 425
D+T+ LWDA + + + D PVTS+ + + ++ +++WD +N+
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAP 545
+KG + G SL+W+ L + MD + DVR +P
Sbjct: 219 TLKGGHQSRVG-SLAWNNHILTTGGMDGLIINNDVRIRSP 257
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 71.3 bits (167), Expect = 5e-13
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR------IKKLKGHANFVN 203
V +GHT + L +S G L +G DN V +WD + + +L+ H + V
Sbjct: 249 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 308
Query: 204 SVSGARRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG- 374
+++ LL + D TIK W+ + S D+ V S+L++ ++LSS
Sbjct: 309 ALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHG 368
Query: 375 -VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
N + +W + ++ GHT V ++ S DG + S + D TLR W+V
Sbjct: 369 FTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 57.6 bits (133), Expect = 6e-09
Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 13/187 (6%)
Frame = +3
Query: 6 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W+ G ++ + G + + ++PDG H+ G ++ V +WD + +++ LK
Sbjct: 152 VYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLK 211
Query: 183 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTA 353
GH + V S++ +L + D I D R R+P+ + V + ++ +
Sbjct: 212 GGHQSRVGSLAW---NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSG 268
Query: 354 EKILSSGVDNVIKMWD---IRNNQISL---KIKGHTDTVTGLSLSWDGAYLLS---NSMD 506
+++ S G DNV+ +WD +N + +++ HT V L+ A LL+ D
Sbjct: 269 QQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGD 328
Query: 507 NTLRIWD 527
T++ W+
Sbjct: 329 RTIKFWN 335
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Frame = +3
Query: 120 ATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 293
A D+TV +WD TG + + + V S++ A G + V +++ ++LWD+
Sbjct: 147 ALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGL-NNSEVQLWDSASNR 205
Query: 294 PVASFDSSYP--VTSVLFNDTAEKILSSGVDNVIKMWDIR-NNQISLKIKGHTDTVTGLS 464
+ + + V S+ +N+ + + G+D +I D+R + I +GHT V GL
Sbjct: 206 QLRTLKGGHQSRVGSLAWNN--HILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLK 263
Query: 465 LSWDGAYLLSNSMDNTLRIWD 527
S G L S DN + IWD
Sbjct: 264 WSGSGQQLASGGNDNVVHIWD 284
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +3
Query: 255 DNTIKLWDAR--KRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 425
D+T+ LWDA + + + D PVTS+ + + ++ +++WD +N+
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAP 545
+KG + G SL+W+ L + MD + DVR +P
Sbjct: 209 TLKGGHQSRVG-SLAWNNHILTTGGMDGLIINNDVRIRSP 247
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 70.5 bits (165), Expect = 8e-13
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
GH + + + P S L +G D V +WD +G + L GH N V SV + G
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNG-NW 324
Query: 237 LVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRN 410
L++AS D IKL+D R + SF + VTS+ ++ E+ SG D I W + +
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGH 384
Query: 411 NQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
++I H ++V L+ G L S S D+T + W
Sbjct: 385 ENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 62.5 bits (145), Expect = 2e-10
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Frame = +3
Query: 3 QILIWNVYGQCENV-MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 179
+ +WN GQ N M+++ H I + +S + +++ +G T+ W
Sbjct: 146 EFTLWN--GQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANK 203
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS--------------- 314
H + +S + + S SDD T+K+WD K +S
Sbjct: 204 TAHKESIRDLSFCKTDLKFC-SCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMP 262
Query: 315 -----SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDG 479
+ V SV ++ T ++S G D ++K+WD R+ + + GH + V + + +G
Sbjct: 263 CNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNG 322
Query: 480 AYLLSNSMDNTLRIWDVR 533
+LL+ S D ++++D+R
Sbjct: 323 NWLLTASKDQIIKLYDIR 340
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
+ GH ++ + ++ +G+ L T + D + ++D+ T ++ +GH V S++
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHE 365
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKILSSGVDNVIKMW 398
E VS S D +I W NP +++ V + ++ + S D+ K W
Sbjct: 366 EYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 248
+I ++ ++P G L TG+ +W+ + L+ H + S+ + +VS
Sbjct: 125 SINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWS-HNENYMVSG 183
Query: 249 SDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
D T+K W N A+ + + + F T K S D +K+WD
Sbjct: 184 DDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 69.3 bits (162), Expect = 2e-12
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Frame = +3
Query: 102 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
++L + D V +WDV TG I H SV + P L S SDD ++KLW+
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNI 826
Query: 282 RKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQISLKI-KGHTDTVT 455
+RN + + + V V F+ + +L+ G D +D+RN + I GH V+
Sbjct: 827 NERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVS 886
Query: 456 GLSLSWDGAYLLSNSMDNTLRIWDVRPFA----PTERCVKLMSGHQHNFEKNLL 605
+ D L++ S DNTL++WD++ T C GH + EKN +
Sbjct: 887 -YAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTN--EKNFV 937
Score = 30.7 bits (66), Expect = 0.81
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 164
++ GH A+ F D L T +TDNT+ +WD+ T
Sbjct: 877 ILSGHNKAVSYAKFL-DNETLVTASTDNTLKLWDLKKTT 914
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 69.3 bits (162), Expect = 2e-12
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Frame = +3
Query: 36 ENVMV--MKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDV-----PTGTRIKKLKGHA 191
EN +V + H G + L F+ S+L +GA D + +WD+ P+ + K G A
Sbjct: 111 ENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSA 170
Query: 192 NF--VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLF---NDTA 353
++ +S R+ ++L S S + T +WD RK+ P+ +F DS SVL N T
Sbjct: 171 TQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTT 230
Query: 354 EKILSSGVDN--VIKMWDIRNNQISLK-IKGHTDTVTGLSLSW---DGAYLLSNSMDNTL 515
+ +++S D+ +K+WD+RN ++ GH V +++ W D +YLL+ + DN
Sbjct: 231 QIMVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGV--IAMEWCPSDSSYLLTCAKDNRT 288
Query: 516 RIWDVRPFAPTERCVKLMSGHQHNFE 593
WD E +L +G+ NF+
Sbjct: 289 ICWDTN---TAEIVAELPAGNNWNFD 311
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 69.3 bits (162), Expect = 2e-12
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Frame = +3
Query: 36 ENVMV--MKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDV-----PTGTRIKKLKGHA 191
EN +V + H G + L F+ S+L +GA D + +WD+ P+ + K G A
Sbjct: 111 ENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSA 170
Query: 192 NF--VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLF---NDTA 353
++ +S R+ ++L S S + T +WD RK+ P+ +F DS SVL N T
Sbjct: 171 TQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTT 230
Query: 354 EKILSSGVDN--VIKMWDIRNNQISLK-IKGHTDTVTGLSLSW---DGAYLLSNSMDNTL 515
+ +++S D+ +K+WD+RN ++ GH V +++ W D +YLL+ + DN
Sbjct: 231 QIMVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGV--IAMEWCPSDSSYLLTCAKDNRT 288
Query: 516 RIWDVRPFAPTERCVKLMSGHQHNFE 593
WD E +L +G+ NF+
Sbjct: 289 ICWDTN---TAEIVAELPAGNNWNFD 311
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 68.5 bits (160), Expect = 3e-12
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 4/181 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
IL ++ Q ++V + GH + L +S D L +G DN + VW+ + + K
Sbjct: 316 ILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSE 375
Query: 186 HANFVNSVSGARRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK 359
H V +++ + LL S D I+ W+ ++S D+ V ++ ++ +
Sbjct: 376 HTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNE 435
Query: 360 ILSSG--VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
++S+ N I +W + GHT V L++S DG +++ + D TLR W+V
Sbjct: 436 LVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 495
Query: 534 P 536
P
Sbjct: 496 P 496
Score = 51.2 bits (117), Expect = 5e-07
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ +WN + G ++ + ++ G+HL G + V +WD R + ++G
Sbjct: 233 VYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEG 292
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEK 359
H V +++ G +L S S D +I D R + S + + V + ++ +
Sbjct: 293 HRLRVGALAW---GSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRE 349
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSN---SMDNTLRIWD 527
+ S G DN + +W+ + Q LK HT V ++ S LL++ + D +R W+
Sbjct: 350 LASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWN 408
Score = 48.8 bits (111), Expect = 3e-06
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Frame = +3
Query: 129 NTVAVWDVPTGTRIKKL--KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVA 302
N V +W+ +++ KL G + V SV A RG L V S +++WDA +
Sbjct: 231 NCVYLWNA-CSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGK-VQIWDASRCKRTR 288
Query: 303 SFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISL-KIKGHTDTVTGLSLSWD 476
+ + L +LSSG D I DIR + + K+ GH V GL S+D
Sbjct: 289 TMEGHRLRVGALA--WGSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYD 346
Query: 477 GAYLLSNSMDNTLRIWDVRPFAP 545
L S DN L +W+ P
Sbjct: 347 NRELASGGNDNRLFVWNQHSTQP 369
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
QI++W Y + + GHT ++ L SPDG + TGA D T+ W+V
Sbjct: 446 QIIVWK-YPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 68.5 bits (160), Expect = 3e-12
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 344
+ K + +N V +S + P +L S I+LWD R + FD PV V F+
Sbjct: 2 LTKFETKSNRVKGLSFHPKRPWILASLHS-GVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 345 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
++ +S G D IK+W+ +N++ + GH D + + + +++S S D T+RIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 525 DVRPFAPTERCVKLMSGHQH 584
+ + + CV +++GH H
Sbjct: 121 NWQ----SRTCVSVLTGHNH 136
Score = 58.4 bits (135), Expect = 4e-09
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 260
L F P + + +WD GT I + H V V P L VS DD
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP-LFVSGGDDY 73
Query: 261 TIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKG 437
IK+W+ + + + + +V F+ I+S+ D I++W+ ++ + G
Sbjct: 74 KIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTG 133
Query: 438 HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
H V S ++S S+D T+R+WD+
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H G + + F +G D + VW+ + L GH +++ +V P +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP-WI 108
Query: 240 VSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
VSASDD TI++W+ + R V+ ++ V F+ + ++S+ +D +++WDI
Sbjct: 109 VSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 55.6 bits (128), Expect = 3e-08
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+I +WN Y + + GH I + F + + + + D T+ +W+ + T + L
Sbjct: 74 KIKVWN-YKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLT 132
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSYPVTSV------- 335
GH ++V S + +L+VSAS D T+++WD A ++ V+ D +T +
Sbjct: 133 GHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGG 191
Query: 336 -------------------LFNDTAEKILSSGVDNVIKMWDIRNNQI--SLKIKGHTDTV 452
F+ T I+S D +K+W + + ++GH + V
Sbjct: 192 VDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNV 251
Query: 453 TGLSLSWDGAYLLSNSMDNTLRIWD 527
+ + ++SNS D ++R+WD
Sbjct: 252 SSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGAR 221
V++GH + F P + +GA D V +W + + L+GH N V+SV
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 222 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
+ +++VS S+D +I++WDA KR + +F + +L +L++G D+ + ++
Sbjct: 259 K-QDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAGHDSGMIVFK 317
Query: 402 IRNNQISLKIKG 437
+ + + + G
Sbjct: 318 LERERPAFALSG 329
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 68.1 bits (159), Expect = 4e-12
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
IL ++ Q ++V +KGH I L +S D L +G DN + VW+ + + +
Sbjct: 273 ILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCE 332
Query: 186 HANFVNSVSGARRGPELLVS--ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK 359
HA V +++ + LL S + D I+ W+ + D++ V +++++ +
Sbjct: 333 HAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNE 392
Query: 360 ILSSG--VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
++S+ N I +W + GH+ V L++S DG +++ + D TLR W+V
Sbjct: 393 LVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 452
Query: 534 P 536
P
Sbjct: 453 P 453
Score = 51.6 bits (118), Expect = 4e-07
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Frame = +3
Query: 129 NTVAVWDVPTGTRIKKL--KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVA 302
N V +W+ +++ KL G V SV A RG L + S T+++WD + +
Sbjct: 188 NCVYLWNA-CSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSS-GTVQIWDVLRCKNIR 245
Query: 303 SFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISL-KIKGHTDTVTGLSLSWD 476
+ + L + +LSSG D I DIR + + K+KGH + GL S D
Sbjct: 246 TMEGHRLRVGALA--WSSSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSD 303
Query: 477 GAYLLSNSMDNTLRIWDVRPFAPTER 554
L S DN L +W+ P R
Sbjct: 304 NRELASGGNDNKLFVWNQHSTQPVLR 329
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ +WN + G + + ++ G+HL G + TV +WDV I+ ++G
Sbjct: 190 VYLWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEG 249
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEK 359
H V +++ + +L S S D +I D R + S + + + ++ +
Sbjct: 250 HRLRVGALAWS---SSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRE 306
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSN---SMDNTLRIWD 527
+ S G DN + +W+ + Q L+ H V ++ S LL++ + D +R W+
Sbjct: 307 LASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWN 365
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
QI++W Y + + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 403 QIIVWK-YPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 66.9 bits (156), Expect = 1e-11
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-------PTGTRIKKLKGHANFVNSVSG 215
GHT + L +S G L +G DN V +WD PT + + + H V +++
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 216 ARRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDN 383
LL + D IK W+ + S ++ V S+L++ + ++LSS N
Sbjct: 276 CPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQN 335
Query: 384 VIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ +W + ++ GHT V ++ S DG + S + D TLR+W+V
Sbjct: 336 QLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
Score = 56.0 bits (129), Expect = 2e-08
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Frame = +3
Query: 102 SHLYTGATDNTVAVWDVPTGTRIK--KLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 275
S++ A +TV +WD +G+ K + V S++ + G +L + D++ ++LW
Sbjct: 103 SNVLAIALGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGL-DNSEVQLW 161
Query: 276 DARKRNPVASFDSSYP--VTSVLFNDTAEKILSSGVDNVIKMWDIR-NNQISLKIKGHTD 446
D V + + V S+ +N+ + + G+D I D+R + I GHT+
Sbjct: 162 DCVSNRQVRTLRGGHESRVGSLAWNNHI--LTTGGMDGKIVNNDVRIRSSIVETYLGHTE 219
Query: 447 TVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFA 542
V GL S G L S DN + IWD R A
Sbjct: 220 EVCGLKWSESGKKLASGGNDNVVHIWDHRSVA 251
Score = 48.4 bits (110), Expect = 4e-06
Identities = 31/139 (22%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Frame = +3
Query: 6 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W+ G ++ + G + + ++ DG L G ++ V +WD + +++ L+
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 183 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTA 353
GH + V S++ +L + D I D R R+ + + V + ++++
Sbjct: 174 GGHESRVGSLAW---NNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESG 230
Query: 354 EKILSSGVDNVIKMWDIRN 410
+K+ S G DNV+ +WD R+
Sbjct: 231 KKLASGGNDNVVHIWDHRS 249
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
Q+ +W Y + + GHT ++ + SPDG + + A D T+ +W+V
Sbjct: 336 QLTLWK-YPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 66.9 bits (156), Expect = 1e-11
Identities = 46/180 (25%), Positives = 90/180 (50%), Gaps = 4/180 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ IW++ + + +KGHT I + ++ HL + + + V ++ +G R +LK
Sbjct: 117 VKIWDLQRKL-CIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKD 175
Query: 186 -HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAE 356
+ + + +R LLV+A DD T+ LWD R+P S+ S P V F+ + E
Sbjct: 176 PNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNE 235
Query: 357 KILSS-GVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
KI++S G+D + +D + + S I + + L+ +G L++ + + + +D+R
Sbjct: 236 KIIASVGMDKKLYTYDSGSRRSSSCI-AYEAPFSSLAFGDNGYILVAGTSNGRVVFYDIR 294
Score = 45.6 bits (103), Expect = 3e-05
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 11/186 (5%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGA------IMQLCFSPDGS-HLYTGATDNTVAVWDVPTG 161
+I +W GQ + + G G + + FS GS ++ +G T V +WD+
Sbjct: 66 KISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQRK 125
Query: 162 TRIKKLKGHANFVNSVSGARRGPELL-VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 338
IKKLKGH + + V + L VS D + + R + + +
Sbjct: 126 LCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLD 185
Query: 339 FNDTAEKIL-SSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSN-SMDN 509
++ ++ +L ++G D + +WD + +K H+ G+ S ++++ MD
Sbjct: 186 YSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDK 245
Query: 510 TLRIWD 527
L +D
Sbjct: 246 KLYTYD 251
Score = 44.4 bits (100), Expect = 6e-05
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Frame = +3
Query: 234 LLVSASDDNTIKLWDARKRN----PVASFDSSYP----VTSVLFNDTAEK-ILSSGVDNV 386
++ S +D I LW ++ PV D ++++ F+ + I S G +
Sbjct: 57 VVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQI 116
Query: 387 IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 515
+K+WD++ K+KGHT T+TG+ + +L S S+ L
Sbjct: 117 VKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDL 159
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 66.9 bits (156), Expect = 1e-11
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 6/179 (3%)
Frame = +3
Query: 6 ILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ IW+ GQC V+ + G G C +G L G N V W++ + L
Sbjct: 168 VRIWDCASGQCTGVLNLGGEVG-----CIISEGPWLLVGMP-NLVKAWNIQNNADLS-LN 220
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-----YPVTSVLFND 347
G V S+ G +LL + + D +I +W R + + FD + + + V
Sbjct: 221 GPVGQVYSLVV---GTDLLFAGTQDGSILVW--RYNSTTSCFDPAASLLGHTLAVVSLYV 275
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
A ++ S +DN IK+W + N Q + HT V L + WD +LLS S+DNT++IW
Sbjct: 276 GANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSL-ICWD-QFLLSCSLDNTVKIW 332
Score = 50.4 bits (115), Expect = 9e-07
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 7/183 (3%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARR 224
+ GH + + LYT + D TV +WD +G T + L G + S
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCIIS-----E 194
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMWD 401
GP LLV N +K W+ + A + PV V +L +G D I +W
Sbjct: 195 GPWLLVGM--PNLVKAWNIQNN---ADLSLNGPVGQVYSLVVGTDLLFAGTQDGSILVWR 249
Query: 402 IRNN----QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLM 569
+ + + GHT V L + + Y S +MDN++++W + +C++ +
Sbjct: 250 YNSTTSCFDPAASLLGHTLAVVSLYVGANRLY--SGAMDNSIKVWSL----DNLQCIQTL 303
Query: 570 SGH 578
+ H
Sbjct: 304 TEH 306
Score = 47.2 bits (107), Expect = 9e-06
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +3
Query: 6 ILIW--NVYGQC-ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 176
IL+W N C + + GHT A++ L + LY+GA DN++ VW + I+
Sbjct: 245 ILVWRYNSTTSCFDPAASLLGHTLAVVSLYVG--ANRLYSGAMDNSIKVWSLDNLQCIQT 302
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
L H + V S+ + L+S S DNT+K+W A
Sbjct: 303 LTEHTSVVMSLIC---WDQFLLSCSLDNTVKIWAA 334
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
++ GH VTG++L L + S D T+RIWD
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWD 172
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 66.9 bits (156), Expect = 1e-11
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
E + +GH GA+ S D S L TG+ D T +WDV +G + K +A SV
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDF 101
Query: 216 ARRGPELLVSASD---DNTIKLW-----------DARKRNPVASFDSSYPVTSVLFNDTA 353
A G L V +D D T + DA + D + ++
Sbjct: 102 AV-GDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLN 160
Query: 354 EKILSSGVDNVIKMWDIRNNQI---SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ I+S G D VI++WD ++ S + GH +T L + D ++ L+ S+D T ++W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 525 DVR 533
D+R
Sbjct: 221 DMR 223
Score = 54.0 bits (124), Expect = 8e-08
Identities = 30/99 (30%), Positives = 48/99 (48%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 224
++MKGH + L ++ +G L++ A D+T +W G R+ +GH N R
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGH-NGAVWCCDVSR 62
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 341
L++ S D T KLWD + + +F + P SV F
Sbjct: 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDF 101
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 294 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW 473
P+ P+T + +N + + S D+ +W N + +GH V +S
Sbjct: 3 PILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSR 62
Query: 474 DGAYLLSNSMDNTLRIWDVR 533
D + L++ S D T ++WDV+
Sbjct: 63 DSSRLITGSADQTAKLWDVK 82
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 173
GH I LC + D SH TG+ D T +WD+ T T +K
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLK 229
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 66.9 bits (156), Expect = 1e-11
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
E + +GH GA+ S D S L TG+ D T +WDV +G + K +A SV
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDF 101
Query: 216 ARRGPELLVSASD---DNTIKLW-----------DARKRNPVASFDSSYPVTSVLFNDTA 353
A G L V +D D T + DA + D + ++
Sbjct: 102 AV-GDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLN 160
Query: 354 EKILSSGVDNVIKMWDIRNNQI---SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ I+S G D VI++WD ++ S + GH +T L + D ++ L+ S+D T ++W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 525 DVR 533
D+R
Sbjct: 221 DMR 223
Score = 54.0 bits (124), Expect = 8e-08
Identities = 30/99 (30%), Positives = 48/99 (48%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 224
++MKGH + L ++ +G L++ A D+T +W G R+ +GH N R
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGH-NGAVWCCDVSR 62
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 341
L++ S D T KLWD + + +F + P SV F
Sbjct: 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDF 101
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 294 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW 473
P+ P+T + +N + + S D+ +W N + +GH V +S
Sbjct: 3 PILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSR 62
Query: 474 DGAYLLSNSMDNTLRIWDVR 533
D + L++ S D T ++WDV+
Sbjct: 63 DSSRLITGSADQTAKLWDVK 82
Score = 40.7 bits (91), Expect = 8e-04
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 14/139 (10%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
GH I LC + D SH TG+ D T +WD+ T T +K VN+VS + +
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHV 249
Query: 237 LVSASDDNT-------------IKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 374
++ D + K +D + + + P+ ++ FN + S G
Sbjct: 250 VLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGG 309
Query: 375 VDNVIKMWDIRNNQISLKI 431
D +++ ++ ++KI
Sbjct: 310 EDGYVRLHHFDSDYFNIKI 328
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 137
E + +KGH G I L F+PDG +G D V
Sbjct: 281 EEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYV 314
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 66.9 bits (156), Expect = 1e-11
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
E + +GH GA+ S D S L TG+ D T +WDV +G + K +A SV
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDF 101
Query: 216 ARRGPELLVSASD---DNTIKLW-----------DARKRNPVASFDSSYPVTSVLFNDTA 353
A G L V +D D T + DA + D + ++
Sbjct: 102 AV-GDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLN 160
Query: 354 EKILSSGVDNVIKMWDIRNNQI---SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ I+S G D VI++WD ++ S + GH +T L + D ++ L+ S+D T ++W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 525 DVR 533
D+R
Sbjct: 221 DMR 223
Score = 54.0 bits (124), Expect = 8e-08
Identities = 30/99 (30%), Positives = 48/99 (48%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 224
++MKGH + L ++ +G L++ A D+T +W G R+ +GH N R
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGH-NGAVWCCDVSR 62
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 341
L++ S D T KLWD + + +F + P SV F
Sbjct: 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDF 101
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 294 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW 473
P+ P+T + +N + + S D+ +W N + +GH V +S
Sbjct: 3 PILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSR 62
Query: 474 DGAYLLSNSMDNTLRIWDVR 533
D + L++ S D T ++WDV+
Sbjct: 63 DSSRLITGSADQTAKLWDVK 82
Score = 40.7 bits (91), Expect = 8e-04
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 14/139 (10%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
GH I LC + D SH TG+ D T +WD+ T T +K VN+VS + +
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHV 249
Query: 237 LVSASDDNT-------------IKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 374
++ D + K +D + + + P+ ++ FN + S G
Sbjct: 250 VLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGG 309
Query: 375 VDNVIKMWDIRNNQISLKI 431
D +++ ++ ++KI
Sbjct: 310 EDGYVRLHHFDSDYFNIKI 328
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 137
E + +KGH G I L F+PDG +G D V
Sbjct: 281 EEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYV 314
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 66.9 bits (156), Expect = 1e-11
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 344
+ K + +N V +S + P +L S I+LWD R + FD PV V F+
Sbjct: 2 LTKFETKSNRVKGLSFHPKRPWILASLHS-GVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 345 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
++ +S G D IK+W+ + ++ + GH D + + + +++S S D T+RIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 120
Query: 525 DVRPFAPTERCVKLMSGHQH 584
+ + + C+ +++GH H
Sbjct: 121 NWQ----SRTCISVLTGHNH 136
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H G + + F +G D + VW+ T + L GH +++ +V P +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENP-WI 108
Query: 240 VSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
VSASDD TI++W+ + R ++ ++ V F+ + ++S+ +D +++WDI
Sbjct: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 58.0 bits (134), Expect = 5e-09
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 260
L F P + + +WD GT I + H V V P L VS DD
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP-LFVSGGDDY 73
Query: 261 TIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKG 437
IK+W+ + + + + +V F+ I+S+ D I++W+ ++ + G
Sbjct: 74 KIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTG 133
Query: 438 HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
H V S ++S S+D T+R+WD+
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 57.2 bits (132), Expect = 8e-09
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGAR 221
V++GH + F P + +GA D V +W + + L+GH N V+SV
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 222 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
+ +++VS S+D +I++WDA KR + +F + +L +L++G DN + ++
Sbjct: 259 K-QDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNGMIVFK 317
Query: 402 IRNNQISLKIKG 437
+ + + + G
Sbjct: 318 LERERPAFALSG 329
Score = 53.2 bits (122), Expect = 1e-07
Identities = 46/195 (23%), Positives = 83/195 (42%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+I +WN Y + + GH I + F + + + + D T+ +W+ + T I L
Sbjct: 74 KIKVWN-YKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLT 132
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKI 362
GH ++V S + +L+VSAS D T+++WD S+ P ++
Sbjct: 133 GHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI----GALKKKSASPADDLMRFSQMNSD 187
Query: 363 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFA 542
L GVD ++K ++GH V S ++S + D +++W +
Sbjct: 188 LFGGVDAIVK----------YVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETK 237
Query: 543 PTERCVKLMSGHQHN 587
E V + GH +N
Sbjct: 238 AWE--VDTLRGHMNN 250
Score = 44.4 bits (100), Expect = 6e-05
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
I IWN + + V+ GH +M F P + + + D TV VWD+ G KK
Sbjct: 117 IRIWNWQSRT-CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALKKKSAS 173
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL 365
A+ + S + +L DA + + D V F+ T I+
Sbjct: 174 PADDLMRFS--QMNSDLFGGV---------DAIVKYVLEGHDRG--VNWASFHPTLPLIV 220
Query: 366 SSGVDNVIKMWDIRNNQISL--KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
S D +K+W + + ++GH + V+ + ++SNS D ++R+WD
Sbjct: 221 SGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +3
Query: 3 QILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 179
Q+ +W + + V ++GH + + F + + + D ++ VWD T I+
Sbjct: 227 QVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTF 286
Query: 180 -KGHANF-VNSVSGARRGPEL-LVSASDDNTIKLWDARKRNP 296
+ H F + +V PE+ L++A DN + ++ + P
Sbjct: 287 RREHDRFWILAVH-----PEINLLAAGHDNGMIVFKLERERP 323
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 66.5 bits (155), Expect = 1e-11
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Frame = +3
Query: 9 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 188
++W+V + E + H+G + + + + S T +TD+ + + + K GH
Sbjct: 390 VVWDVKAE-EWKQQFEFHSGPTLDVDWRNNVSFA-TSSTDSMIYLCKIGETRPAKTFTGH 447
Query: 189 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAE--- 356
VN V G LL S SDD+T K+W+ ++ V + + + ++ ++ T
Sbjct: 448 QGEVNCVKWDPTG-SLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTN 506
Query: 357 ------KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 518
+ S+ D+ +K+WD ++ GH + V L+ S +G Y+ S S+D ++
Sbjct: 507 NPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIH 566
Query: 519 IWDVR 533
IW ++
Sbjct: 567 IWSIK 571
Score = 60.9 bits (141), Expect = 7e-10
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 10/185 (5%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
Q IW + G E + + H G I L ++ G +L TG+ D T VWDV ++ +
Sbjct: 347 QARIWTLNG--ELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFE 404
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEK 359
H+ V R ++S D+ I L + P +F V V ++ T
Sbjct: 405 FHSGPTLDVDW--RNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSL 462
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDG---------AYLLSNSMDNT 512
+ S D+ K+W+I+ + ++ HT + + S G L S S D+T
Sbjct: 463 LASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDST 522
Query: 513 LRIWD 527
+++WD
Sbjct: 523 VKLWD 527
Score = 52.4 bits (120), Expect = 2e-07
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH---------LYTGATDNTVAVWDVPTGT 164
IWN+ Q V ++ HT I + +SP G L + + D+TV +WD G
Sbjct: 474 IWNIK-QSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Query: 165 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN 344
+ GH V S++ + G E + S S D +I +W ++ V ++ + + V +N
Sbjct: 533 MLCSFNGHREPVYSLAFSPNG-EYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWN 591
Query: 345 DTAEKILSSGVDNVIKMWDIR 407
KI + DN + + D R
Sbjct: 592 KEGNKIAACFADNSVCVLDFR 612
Score = 51.6 bits (118), Expect = 4e-07
Identities = 41/165 (24%), Positives = 70/165 (42%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
+V +++GHT + +SP S L +G+ D T +W +P G S
Sbjct: 257 DVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEG--------------SFKAV 302
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
G + N + L A+ + S + S VT++ +N + + D ++W
Sbjct: 303 HTGRNI-------NALILKHAKGK----SNEKSKDVTTLDWNGEGTLLATGSCDGQARIW 351
Query: 399 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ IS K H + L + G YLL+ S+D T +WDV+
Sbjct: 352 TLNGELISTLSK-HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVK 395
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 402 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
I N+ + + ++GHT V + S + L S S D T RIW +
Sbjct: 253 IPNSDVRI-LEGHTSEVCACAWSPSASLLASGSGDATARIWSI 294
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 66.5 bits (155), Expect = 1e-11
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR--IKKLKGHANFVNSVSGARRGPELLVS 245
+ +L +PD H A + + ++DV + + + H N V +V G + + + S
Sbjct: 38 VNRLEITPD-KHYLAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAV-GFQCDAKWMYS 95
Query: 246 ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 425
S+D T+K+WD R ++S V +V+ + +++S + I++WD+R N S
Sbjct: 96 GSEDGTVKIWDLRAPGCQKEYESVAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSC 155
Query: 426 KIKGHTDT-VTGLSLSWDGAYLLSNSMDNTLRIW 524
++ DT V L++ WDG +++ + T +W
Sbjct: 156 ELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVW 189
Score = 59.3 bits (137), Expect = 2e-09
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 221
VM HT +M + F D +Y+G+ D TV +WD+ K+ + A VN+V
Sbjct: 71 VMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVA-AVNTVVLHP 129
Query: 222 RGPELLVSASDDNTIKLWDARKRN----PVASFDSSYPVTSVLFNDTAEKILSSGVDNVI 389
E L+S + I++WD R + V D++ +V+++ T ++++
Sbjct: 130 NQTE-LISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGT--MVVAANNRGTC 186
Query: 390 KMWDIRNNQISL-------KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPT 548
+W + + ++ K++ H + LS YL + S D T++IW+V F
Sbjct: 187 YVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGF--- 243
Query: 549 ERCVKLMSGHQ 581
+ K+++GHQ
Sbjct: 244 -KLEKVLTGHQ 253
Score = 50.4 bits (115), Expect = 9e-07
Identities = 29/93 (31%), Positives = 44/93 (47%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
++ H G I++ SP +L T ++D TV +W+V K L GH +V + G
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDG- 265
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVT 329
E LV+AS D T +LW V + + T
Sbjct: 266 EFLVTASSDMTARLWSMPAGKEVKVYQGHHKAT 298
Score = 48.4 bits (110), Expect = 4e-06
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 9/179 (5%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVS 245
A+ + P+ + L +G + + VWD+ + +L + V S++ G ++V+
Sbjct: 121 AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGT-MVVA 179
Query: 246 ASDDNTIKLWDA-RKRNPVASFDSSYP-------VTSVLFNDTAEKILSSGVDNVIKMWD 401
A++ T +W R + + F+ + + L + + + ++ D +K+W+
Sbjct: 180 ANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWN 239
Query: 402 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
+ ++ + GH V S DG +L++ S D T R+W + P + VK+ GH
Sbjct: 240 VDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSM----PAGKEVKVYQGH 294
Score = 47.6 bits (108), Expect = 7e-06
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Frame = +3
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEK-ILSSGVDNVIKMWDIR 407
+L +AS D+TI+ W+A + YP + V T +K L++ + I+++D+
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTI--QYPDSHVNRLEITPDKHYLAAACNPHIRLFDVN 64
Query: 408 NN--QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+N Q + HT+ V + D ++ S S D T++IWD+R
Sbjct: 65 SNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
Score = 47.6 bits (108), Expect = 7e-06
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Frame = +3
Query: 108 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 287
L T + D+T+ W+ TG + ++ + VN + L +A + + I+L+D
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLE-ITPDKHYLAAACNPH-IRLFDVNS 65
Query: 288 RN--PVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTG 458
+ PV ++DS + V +V F A+ + S D +K+WD+R + + V
Sbjct: 66 NSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNT 124
Query: 459 LSLSWDGAYLLSNSMDNTLRIWDVR 533
+ L + L+S + +R+WD+R
Sbjct: 125 VVLHPNQTELISGDQNGNIRVWDLR 149
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ IWNV G + V+ GH + FS DG L T ++D T +W +P G +K +G
Sbjct: 235 VKIWNVDG-FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQG 293
Query: 186 H 188
H
Sbjct: 294 H 294
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGA--IMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIK 173
+I +W++ G+ + + GH + +++ CF D S + +G+ D+ V +W++ ++
Sbjct: 420 EIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLE 479
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 293
L GH+ VN VS + P +L SASDD TI++W K N
Sbjct: 480 VLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGKPN 519
Score = 49.2 bits (112), Expect = 2e-06
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Frame = +3
Query: 9 LIWNVY--GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+IW V + E ++ H + + +SPD + L T + +WDV TG ++
Sbjct: 249 IIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGV-LRHTF 307
Query: 183 GHANFVNSVSGARRGPE---LLVSASD-DNTIKLWDARKRNPVASFDSSYP-VTSVLFND 347
G+ N +VS P+ L+ +SD + I +WD A + P V +
Sbjct: 308 GNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTP 367
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
E +++ D I++ ++ ++ +T LS+S DG + + N + +WD
Sbjct: 368 DGESMITVFSDKEIRILNLETK--VERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWD 425
Query: 528 V 530
+
Sbjct: 426 L 426
Score = 48.4 bits (110), Expect = 4e-06
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKG-HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
I++W+ G + +G ++ L +PDG + T +D + + ++ T +++++
Sbjct: 339 IVMWDTDGN--EIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLET--KVERVI 394
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPV---ASFDSSYPVTSVLFND 347
+ S+S + G +V+ S I LWD + P+ S Y + S
Sbjct: 395 SEEQPITSLSISGDGKFFIVNLSCQE-IHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGL 453
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLL-SNSMDNTLRIW 524
+ I S D+ + +W+++N + + GH+ TV +S + +L S S D T+RIW
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 66.1 bits (154), Expect = 2e-11
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
HT +++ L ++ + ++ A+ D V VWDV TGT ++ H V +V+ PE+
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 237 LVSASDDNTIKLWDARKRNPVA-SFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRN 410
L+S S D T+ L D R+ + + V S+ ++ +E + S D +K +D+R
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQ 351
Query: 411 NQI-------SLKIKGHTDTVTGLSLSWDGAYLL-SNSMDNTLRIWDVRPFAPT 548
I S I GH + T +S + LL + S D T+++WD+ P+
Sbjct: 352 ASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPS 405
Score = 30.3 bits (65), Expect = 1.1
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Frame = +3
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD-ARKRNPVASFDSSYPVTSVLFNDT 350
K H V ++ + +L SAS D +K+WD A + + V +V +N
Sbjct: 228 KQGSHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHY 287
Query: 351 AEKILSSG-VDNVIKMWDIRN-NQISLKIKGHTDTVTGLSLSWD----GAYLLSNSMDNT 512
A ++L SG D + + D R + K +D SL+WD ++++S D T
Sbjct: 288 APEVLLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVE---SLAWDPHSEHSFVVSLE-DGT 343
Query: 513 LRIWDVR 533
++ +DVR
Sbjct: 344 VKGFDVR 350
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 221
VM ++GHT ++ L +SPD S L +G+ DNTV +W++ TG L+GH + V V+
Sbjct: 111 VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDP 170
Query: 222 RGPELLVSASDDNTIKLW 275
G + S SDD T+ +W
Sbjct: 171 IG-SFIASQSDDKTVIIW 187
Score = 49.2 bits (112), Expect = 2e-06
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Frame = +3
Query: 60 HTGA-IMQLCFSPDGSHLYTGATDNTVAVWD---VPTGTRI-KKLKGHANFVNSVSGARR 224
H G I + P+G TG D+ D + T R+ L+ H VN V A+
Sbjct: 11 HEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKN 70
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDS-------SYPVTSVLFNDTAEKI------- 362
+ S SDD I++ + + + F S ++ L TA+ +
Sbjct: 71 S-RYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPD 129
Query: 363 ---LSSG-VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
L+SG +DN + +W++R + ++GH V G++ G+++ S S D T+ IW
Sbjct: 130 DSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIW 187
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +3
Query: 399 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
D+ N + + ++GHT V L+ S D + L S S+DNT+ IW++R T C ++ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMR----TGMCTTVLRGH 159
Score = 33.9 bits (74), Expect = 0.087
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 12 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 188
IWN+ G C V+ +GH + + + P GS + + + D TV +W + GH
Sbjct: 144 IWNMRTGMCTTVL--RGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTG-AIMQLCFSPDGSHLYTGATDNTVAV 143
I +W G + V K G +++ L +SPDG L+ + D TVA+
Sbjct: 309 ITVWTT-GSARPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVAM 354
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +3
Query: 147 DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP- 323
DV + L+GH V ++ + +L S S DNT+ +W+ R
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSP-DDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSL 162
Query: 324 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGH 440
V V ++ I S D + +W + ++ + GH
Sbjct: 163 VKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 65.3 bits (152), Expect = 3e-11
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRGP 230
GHT ++ + S + + +G+ D+T +WD +R ++ GH VN+V G
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 199
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFD-----SSYPVTSVLFNDTAEKILSSGV--DNVI 389
+ SDD T +L+D R + + + + PVTS+ F+ + ++L +G +N
Sbjct: 200 RF-GTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS-VSGRLLFAGYASNNTC 257
Query: 390 KMWDIRNNQISLKI----KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+WD ++ L + H + ++ L LS DG+ L + S D+ L+IW
Sbjct: 258 YVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 306
Score = 63.7 bits (148), Expect = 9e-11
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSV 209
++ GH G + + P + +HL T + D T +WDV TG + GH V SV
Sbjct: 89 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 148
Query: 210 SGARRGPELLVSASDDNTIKLWDARKRN-PVASFDS-SYPVTSVLFNDTAEKILSSGVDN 383
S + P +S S D+T +LWD R + V +F V +V F + + D
Sbjct: 149 SISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDG 208
Query: 384 VIKMWDIRNNQISLKIKGHTD----TVTGLSLSWDGAYLLSN-SMDNTLRIWD 527
+++DIR + H D VT ++ S G L + + +NT +WD
Sbjct: 209 TCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 261
Score = 51.2 bits (117), Expect = 5e-07
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 15/192 (7%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-----GTR 167
++++WN + +K +M FSP+G + G D+ +++ + + GT
Sbjct: 26 RLIVWNALTS-QKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTV 84
Query: 168 --IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY------P 323
+ L GH +V+ L+++S D T LWD + F +
Sbjct: 85 PVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTAD 144
Query: 324 VTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSN 497
V SV + +S D+ ++WD R +++ GH V + DG +
Sbjct: 145 VLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTG 204
Query: 498 SMDNTLRIWDVR 533
S D T R++D+R
Sbjct: 205 SDDGTCRLYDIR 216
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W+ V GH G + + F PDG TG+ D T ++D+ TG +++ + H
Sbjct: 169 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHG 228
Query: 192 NF----VNSVSGARRGPELLVSASDDNTIKLWD 278
+ V S++ + G L + +NT +WD
Sbjct: 229 DGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 261
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 65.3 bits (152), Expect = 3e-11
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRGP 230
GHT ++ + S + + +G+ D+T +WD +R ++ GH VN+V G
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFD-----SSYPVTSVLFNDTAEKILSSGV--DNVI 389
+ SDD T +L+D R + + + + PVTS+ F+ + ++L +G +N
Sbjct: 262 RF-GTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS-VSGRLLFAGYASNNTC 319
Query: 390 KMWDIRNNQISLKI----KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+WD ++ L + H + ++ L LS DG+ L + S D+ L+IW
Sbjct: 320 YVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 368
Score = 63.7 bits (148), Expect = 9e-11
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSV 209
++ GH G + + P + +HL T + D T +WDV TG + GH V SV
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 210 SGARRGPELLVSASDDNTIKLWDARKRN-PVASFDS-SYPVTSVLFNDTAEKILSSGVDN 383
S + P +S S D+T +LWD R + V +F V +V F + + D
Sbjct: 211 SISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDG 270
Query: 384 VIKMWDIRNNQISLKIKGHTD----TVTGLSLSWDGAYLLSN-SMDNTLRIWD 527
+++DIR + H D VT ++ S G L + + +NT +WD
Sbjct: 271 TCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 323
Score = 52.0 bits (119), Expect = 3e-07
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
++GHTG + L ++P+ + + + + D + VW+ T + +K +V + + + G
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF-------------NDTAEKILSS 371
+ D + + A D + PV+ +L N+ A I SS
Sbjct: 121 SVACGGLD----SVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSS 176
Query: 372 GVDNVIKMWDIRNNQISLKI-----KGHTDTVTGLSLSWDGA-YLLSNSMDNTLRIWDVR 533
G D +WD+ + GHT V +S+S + +S S D+T R+WD R
Sbjct: 177 G-DQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTR 235
Query: 534 PFAPTERCVKLMSGHQ 581
R V+ GH+
Sbjct: 236 ---AASRAVRTFHGHE 248
Score = 51.2 bits (117), Expect = 5e-07
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 15/192 (7%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-----GTR 167
++++WN + +K +M FSP+G + G D+ +++ + + GT
Sbjct: 88 RLIVWNALTS-QKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTV 146
Query: 168 --IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY------P 323
+ L GH +V+ L+++S D T LWD + F +
Sbjct: 147 PVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTAD 206
Query: 324 VTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSN 497
V SV + +S D+ ++WD R +++ GH V + DG +
Sbjct: 207 VLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTG 266
Query: 498 SMDNTLRIWDVR 533
S D T R++D+R
Sbjct: 267 SDDGTCRLYDIR 278
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W+ V GH G + + F PDG TG+ D T ++D+ TG +++ + H
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHG 290
Query: 192 NF----VNSVSGARRGPELLVSASDDNTIKLWD 278
+ V S++ + G L + +NT +WD
Sbjct: 291 DGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 323
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 65.3 bits (152), Expect = 3e-11
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Frame = +3
Query: 69 AIMQLCFSPD-GSHLYTGATDNTVAVWDV---PTGTRIKKLKGHANFVNSVSGARRGPEL 236
A+ +C+S S L D +V ++D P I+ + HA V SV +
Sbjct: 62 AVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDS 121
Query: 237 LVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGV-DNVIKMWDIRN 410
+++S D+T+KLW + V +F + +Y V ++N + +S D +++WD+R
Sbjct: 122 FLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 181
Query: 411 NQISLKIKGHTDTVTGLSLSW---DGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQ 581
++ I H + LS W D L ++S+D T+++WDVR + + +++GH
Sbjct: 182 PGSTMIIPAHDFEI--LSCDWNKYDDCILATSSVDKTVKVWDVRSYRVP---LAVLNGHG 236
Query: 582 HNFEK 596
+ K
Sbjct: 237 YAVRK 241
Score = 61.3 bits (142), Expect = 5e-10
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
H + + ++P + T + D+TV +W + ++ K HA V + ++
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDV 164
Query: 237 LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKIL-SSGVDNVIKMWDIRN 410
SAS D T+++WD R+ + + + S +N + IL +S VD +K+WD+R+
Sbjct: 165 FASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRS 224
Query: 411 NQISLKI-KGHTDTVTGLSLSWDGAYLLSN-SMDNTLRIWD 527
++ L + GH V + S L+++ S D ++ +WD
Sbjct: 225 YRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWD-VPTGTRIKKL 179
+ +W+V + V+ GH A+ ++ FSP L + D +V +WD + + +
Sbjct: 217 VKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVEDALVGRY 276
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLW 275
H F + + L+ S D + +W
Sbjct: 277 DHHTEFAVGIDMSVLVEGLMASTGWDELVYVW 308
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 64.5 bits (150), Expect = 5e-11
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV------PTGTRIKKLKGHANFVNSVSGA 218
GHT + L +S G L +G DN V +WD PT + + + H V +++
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 219 RRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDNV 386
LL + D I W+ + S ++ V S+L++ + ++LS+ N
Sbjct: 294 PFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQ 353
Query: 387 IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ +W + ++ GHT V ++ S DG + S + D TLR+W+V
Sbjct: 354 LTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = +3
Query: 6 ILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W+ ++ + G + + ++ DG L G ++ V VWD + ++ L+
Sbjct: 132 VYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLR 191
Query: 183 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTA 353
GH + V S++ +L + D I D R R+ + + V + ++++
Sbjct: 192 GGHESRVGSLAW---NNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESG 248
Query: 354 EKILSSGVDNVIKMWD 401
+K+ S G DNV+ +WD
Sbjct: 249 KKLASGGNDNVVHIWD 264
Score = 40.7 bits (91), Expect = 8e-04
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Frame = +3
Query: 231 ELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVLFNDTAEKI-LSSGVDN-VIKM 395
E +V +T+ LWDA V D + PVTS+ N T + + L+ G+DN +++
Sbjct: 121 EYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSI--NWTQDGLDLAVGLDNSEVQV 178
Query: 396 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
WD +N+ ++G ++ G SL+W+ L + MD + DVR
Sbjct: 179 WDCVSNRHVRTLRGGHESRVG-SLAWNNHILTTGGMDGKIVNNDVR 223
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
Q+ +W Y + + GHT ++ + SPDG + + A D T+ +W+V
Sbjct: 353 QLTLWK-YPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 64.5 bits (150), Expect = 5e-11
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGA--IMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIK 173
+I +WN+ G + V KGH + I++ CF + + +G+ D+ V +W TG I
Sbjct: 466 EIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIV 525
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 293
+L GHA VN VS + +L SASDD TI++W + N
Sbjct: 526 ELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRIN 565
Score = 57.2 bits (132), Expect = 8e-09
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Frame = +3
Query: 9 LIWNVY--GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL- 179
+IW + G + GH ++ + +SPD + T + + WDV +G +
Sbjct: 299 IIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYE 358
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVA-SFDSSYPVTSVLFNDTAE 356
KG + ++ G + +++ D +I +WD R + V+ + D +
Sbjct: 359 KGGISPISC--GWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGK 416
Query: 357 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
++S D+VI ++D R + I+ D +T SLS D Y+L N ++ +R+W++
Sbjct: 417 WLVSVCKDSVISLFD-REATVERLIE-EEDMITSFSLSNDNKYILVNLLNQEIRLWNI 472
Score = 55.2 bits (127), Expect = 3e-08
Identities = 36/169 (21%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNS 206
+ +++ HT + L FS +G +L + + D T +W++ I L GH V +
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 207 VSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS--YPVTSVLFNDTAEKILSSGVD 380
+ + ++L +++ I+ WD + V ++ P++ + D + I++ D
Sbjct: 325 ILWSPDDRQVLTCGAEE-VIRRWDVDSGDCVHMYEKGGISPISCGWYPD-GQGIIAGMTD 382
Query: 381 NVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
I MWD+ + T V+ ++++ DG +L+S D+ + ++D
Sbjct: 383 RSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD 431
Score = 44.4 bits (100), Expect = 6e-05
Identities = 39/200 (19%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
I +W++ G+ E T + + + DG L + D+ ++++D +++L
Sbjct: 385 ICMWDLDGR-EKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD--REATVERLIE 441
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL----FNDTA 353
+ + S S + +LV+ + I+LW+ + S + + + F
Sbjct: 442 EEDMITSFSLSNDNKYILVNLLNQE-IRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYK 500
Query: 354 EKILSSGV-DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN-TLRIWD 527
+ ++SG D+ + +W ++ +++ GH V +S S ++L+++ D+ T+RIW
Sbjct: 501 QAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWG 560
Query: 528 VRPFAPTERCVKLMSGHQHN 587
+ + KL+ G N
Sbjct: 561 LDRINQQNQKKKLVQGSSSN 580
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 330 SVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
S +F++T + LS D+ I + + ++ HTD V L S +G YL S+S D
Sbjct: 238 SCVFHNTLDSDLSLYSDHQCGKHQIPSQTAQI-LESHTDEVWFLQFSHNGKYLASSSKDQ 296
Query: 510 TLRIWDV 530
T IW++
Sbjct: 297 TAIIWEI 303
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 64.5 bits (150), Expect = 5e-11
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 5/193 (2%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
G++ I + FS DG + G++D+++ V+D+ + H + VN+V A L
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 237 LVSASDDNTIKLWDAR----KRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWD 401
++S SDDN K+WD R + P VT + +S+G D IK+WD
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Query: 402 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQ 581
IR ++S + + + WD + MD D++ P ++ V G
Sbjct: 347 IR--KMSSSAPARHEVLR--NYEWDYRW-----MDYPTEARDLK--HPLDQSVSTYKG-- 393
Query: 582 HNFEKNLLRCAWS 620
H+ + L+RC +S
Sbjct: 394 HSVLRTLIRCYFS 406
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 64.5 bits (150), Expect = 5e-11
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 9/182 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H AI L S D LY+G+ D T VW V ++ + H + VN+V G L+
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG--LV 267
Query: 240 VSASDDNTIKLW-------DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
+ S D T+K+W D + VT++ + +A + D + W
Sbjct: 268 FTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFW 327
Query: 399 DIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTER-CVKLMS 572
+ NN + + KGH V L L G + S S D +R+W RP E C+ +++
Sbjct: 328 ERENNMKNGGVLKGHKLAV--LCLVAAGNLMFSGSADLGIRVWR-RPEGGGEHVCLSVLT 384
Query: 573 GH 578
GH
Sbjct: 385 GH 386
Score = 41.5 bits (93), Expect = 4e-04
Identities = 39/161 (24%), Positives = 67/161 (41%)
Frame = +3
Query: 99 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 278
G LYTG+ + VW K ++ V ++ A + + + D I++W
Sbjct: 108 GDLLYTGSDSKNIRVW--KNHVEFSSFKSNSGLVKAIVLA---GDKIFTGHQDGKIRVWK 162
Query: 279 ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTG 458
A AS +S+ + + I +S V + + RN + H D ++
Sbjct: 163 A------ASKESNVHRRVGTMPNLLDYIRNSIVPSSYFNFTRRNRSSAALGFRHLDAISC 216
Query: 459 LSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQ 581
L+LS D L S S D T ++W V RCV+ ++ H+
Sbjct: 217 LALSEDKRLLYSGSWDKTFKVWRVSDL----RCVESVNAHE 253
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 64.5 bits (150), Expect = 5e-11
Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGT-RIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
S DG L T + +W+VP T +I LKGH V V + E L +AS D T
Sbjct: 72 SRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTE 131
Query: 267 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTD 446
K+W D + T F SSG D++ ++WD+R + L +GH
Sbjct: 132 KIWKT---------DGTLLQT---FK------ASSGFDSLARVWDLRTARNILIFQGHIK 173
Query: 447 TVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
V + S +G +L S DN RIWD+R
Sbjct: 174 QVLSVDFSPNGYHLASGGEDNQCRIWDLR 202
Score = 61.3 bits (142), Expect = 5e-10
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 3/193 (1%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 188
+W V ++V+KGH + + FS D L T +TD T +W GT ++ K
Sbjct: 89 LWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTD-GTLLQTFKAS 147
Query: 189 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKIL 365
+ F D+ ++WD R + F V SV F+ +
Sbjct: 148 SGF-------------------DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLA 188
Query: 366 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSN-SMDNTLRIWDVRPFA 542
S G DN ++WD+R ++ I H + V+ + Y L+ S D + IW R F+
Sbjct: 189 SGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFS 248
Query: 543 PTERCVKLMSGHQ 581
VK + GH+
Sbjct: 249 ----LVKSLVGHE 257
Score = 47.6 bits (108), Expect = 7e-06
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +3
Query: 126 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 305
D+ VWD+ T I +GH V SV + G L S +DN ++WD R R +
Sbjct: 151 DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYH-LASGGEDNQCRIWDLRMRKLLYI 209
Query: 306 FDSSYPVTSVLFNDTAEK--ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDG 479
+ + S + + E+ + ++ D + +W R+ + + GH V L ++ D
Sbjct: 210 IPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDIAVDS 269
Query: 480 A 482
+
Sbjct: 270 S 270
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 435 GHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQH 584
G +TG SLS DG L++ S+ ++W+V T + V L +H
Sbjct: 61 GDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQV--TNKIVVLKGHKEH 108
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKL 179
Q IW++ + + + ++ H + Q+ + P + L T + D V +W + +K L
Sbjct: 195 QCRIWDLRMR-KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSL 253
Query: 180 KGHANFVNSV 209
GH + V S+
Sbjct: 254 VGHESKVASL 263
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 64.1 bits (149), Expect = 7e-11
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV---SGARRGPELLV 242
+ Q+ D + + + NTV ++ TG + KGH++ VN + S + P +L
Sbjct: 44 VFQIVPKIDWTAIAVSLSTNTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLH 103
Query: 243 SASDDNTIKLWDARKRNPVASFD--SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN- 413
S S D TI+ WD R V+ D + + S + A+ +L+ G + +WD RN+
Sbjct: 104 SCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK 163
Query: 414 QISLKIKGHTDTVT 455
Q++ + H D VT
Sbjct: 164 QVACLEESHMDDVT 177
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 381 NVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGA----YLLSNSMDNTLRIWDVRPFAPT 548
N +K++ Q + KGH+DTV ++ S D A L S S D T+R WD R F
Sbjct: 63 NTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQV 122
Query: 549 ER 554
R
Sbjct: 123 SR 124
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 63.7 bits (148), Expect = 9e-11
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSV 209
++ GH G + + P + +HL T + D T +WDV TG + GH V SV
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 210 SGARRGPELLVSASDDNTIKLWDARKRN-PVASFDS-SYPVTSVLFNDTAEKILSSGVDN 383
S + P +S S D+T +LWD R + V +F V +V F + + D
Sbjct: 211 SISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDG 270
Query: 384 VIKMWDIRNNQISLKIKGHTD----TVTGLSLSWDGAYLLSN-SMDNTLRIWD 527
+++DIR + H D VT ++ S G L + + +NT +WD
Sbjct: 271 TCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 323
Score = 52.0 bits (119), Expect = 3e-07
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
++GHTG + L ++P+ + + + + D + VW+ T + +K +V + + + G
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF-------------NDTAEKILSS 371
+ D + + A D + PV+ +L N+ A I SS
Sbjct: 121 SVACGGLD----SVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSS 176
Query: 372 GVDNVIKMWDIRNNQISLKI-----KGHTDTVTGLSLSWDGA-YLLSNSMDNTLRIWDVR 533
G D +WD+ + GHT V +S+S + +S S D+T R+WD R
Sbjct: 177 G-DQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTR 235
Query: 534 PFAPTERCVKLMSGHQ 581
R V+ GH+
Sbjct: 236 ---AASRAVRTFHGHE 248
Score = 51.2 bits (117), Expect = 5e-07
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 15/192 (7%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-----GTR 167
++++WN + +K +M FSP+G + G D+ +++ + + GT
Sbjct: 88 RLIVWNALTS-QKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTV 146
Query: 168 --IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY------P 323
+ L GH +V+ L+++S D T LWD + F +
Sbjct: 147 PVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTAD 206
Query: 324 VTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSN 497
V SV + +S D+ ++WD R +++ GH V + DG +
Sbjct: 207 VLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTG 266
Query: 498 SMDNTLRIWDVR 533
S D T R++D+R
Sbjct: 267 SDDGTCRLYDIR 278
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W+ V GH G + + F PDG TG+ D T ++D+ TG +++ + H
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHG 290
Query: 192 NF----VNSVSGARRGPELLVSASDDNTIKLWD 278
+ V S++ + G L + +NT +WD
Sbjct: 291 DGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 323
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 63.7 bits (148), Expect = 9e-11
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGAR 221
+ GH+ + + F D + T + D TV +W P L H+ V +V+
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVT-VH 318
Query: 222 RGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPV--TSVLFNDTAEKILSSGVD-NVI 389
+ VSAS D T +D + +A D S V T+ F+ IL +G +V+
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDG-LILGTGTSQSVV 377
Query: 390 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
K+WD+++ K GHT VT +S S +G Y L+ + ++ +R+WD+R
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFSENG-YFLATAAEDGVRLWDLR 424
Score = 54.8 bits (126), Expect = 4e-08
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Frame = +3
Query: 114 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW----DA 281
TG D T ++D P+G + L GH+ V SV +L+++AS D T+++W D
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFV-GDSDLVLTASADKTVRIWRNPGDG 297
Query: 282 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTV--T 455
D S V +V + T + +S+ +D +D+ + ++ + V T
Sbjct: 298 NYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYT 357
Query: 456 GLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ DG L + + + ++IWDV+
Sbjct: 358 AAAFHPDGLILGTGTSQSVVKIWDVK 383
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
F PDG L TG + + V +WDV + + K GH V ++S + G L +A D +
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG--V 418
Query: 267 KLWDARKRNPVASFDSS 317
+LWD RK SF S+
Sbjct: 419 RLWDLRKLRNFKSFLSA 435
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
I + GVD ++D + QI + GH+ VT + D +L+ S D T+RIW
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 63.7 bits (148), Expect = 9e-11
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGAR 221
+ GH+ + + F D + T + D TV +W P L H+ V +V+
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVT-VH 318
Query: 222 RGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPV--TSVLFNDTAEKILSSGVD-NVI 389
+ VSAS D T +D + +A D S V T+ F+ IL +G +V+
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDG-LILGTGTSQSVV 377
Query: 390 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
K+WD+++ K GHT VT +S S +G Y L+ + ++ +R+WD+R
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFSENG-YFLATAAEDGVRLWDLR 424
Score = 54.8 bits (126), Expect = 4e-08
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Frame = +3
Query: 114 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW----DA 281
TG D T ++D P+G + L GH+ V SV +L+++AS D T+++W D
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFV-GDSDLVLTASADKTVRIWRNPGDG 297
Query: 282 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTV--T 455
D S V +V + T + +S+ +D +D+ + ++ + V T
Sbjct: 298 NYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYT 357
Query: 456 GLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ DG L + + + ++IWDV+
Sbjct: 358 AAAFHPDGLILGTGTSQSVVKIWDVK 383
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
F PDG L TG + + V +WDV + + K GH V ++S + G L +A D +
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG--V 418
Query: 267 KLWDARKRNPVASFDSS 317
+LWD RK SF S+
Sbjct: 419 RLWDLRKLRNFKSFLSA 435
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
I + GVD ++D + QI + GH+ VT + D +L+ S D T+RIW
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 63.3 bits (147), Expect = 1e-10
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
+V GH+ ++ + +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 5 LVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSL 64
Query: 216 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKM 395
+ SAS D T K+W+A + + SF+ + V + F++ ++L+ G++ ++++
Sbjct: 65 DKNAIRA-ASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRI 123
Query: 396 WDIRNNQISLKIKGHT--DTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+D+ K G++ T L D L S + +R+WD+R
Sbjct: 124 FDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIR 171
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA-NFVNSVSGARRGPEL 236
H + FS D L TG + + ++D+ K G++ + +V +
Sbjct: 96 HKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTI 155
Query: 237 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
L S +D I+LWD R V + ++ PVTS + I ++ +V K WD +N
Sbjct: 156 LSSCTDTGDIRLWDIRSDKIVHTLETKSPVTSAEVSQDGRYITTADGSSV-KFWDAKN 212
Score = 42.3 bits (95), Expect = 2e-04
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
Frame = +3
Query: 66 GAIMQLCFSPDGSHLYTGATDN-TVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 242
G+I + + + + + TD + +WD+ + + L+ + V S ++ G +
Sbjct: 141 GSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLETKSP-VTSAEVSQDGR--YI 197
Query: 243 SASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRNNQI 419
+ +D +++K WDA+ + S+D V S ++ G D + +D + +
Sbjct: 198 TTADGSSVKFWDAKNFGLLKSYDMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQTGEE 257
Query: 420 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHNFEKN 599
KGH V + + G S S D T+RIW V E +SGH +
Sbjct: 258 IGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEE--SNLSGHVKLVAEE 315
Query: 600 LLRCAWS 620
++R A S
Sbjct: 316 VVRKAES 322
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--LKGHANFV 200
E + KGH G + + ++P G +G+ D TV +W V + ++ L GH V
Sbjct: 256 EEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLV 312
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 62.9 bits (146), Expect = 2e-10
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Frame = +3
Query: 12 IWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 188
+W+ GQC V+ + G G ++ +G L G N V W++ T + L G
Sbjct: 177 VWDCASGQCTGVLKLGGEIGCVLS-----EGPWLLVGMP-NLVKAWNIETNAD-QSLSGP 229
Query: 189 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN----PVASFDSSYPVTSVLFNDTAE 356
V S+ G +LL + + D +I W P AS + + + V A
Sbjct: 230 VGQVYSLVV---GTDLLFAGTQDGSILAWRYNAATNCFEPSASL-TGHTLAVVTLYVGAN 285
Query: 357 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
++ S +D IK+W + N Q + H+ V L + WD +LLS S+DNT++IW
Sbjct: 286 RLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSL-ICWD-QFLLSCSLDNTVKIW 339
Score = 53.6 bits (123), Expect = 1e-07
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 7/183 (3%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARR 224
+ GH + + LYTG+ D T+ VWD +G T + KL G V S
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLS-----E 201
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMW- 398
GP LLV N +K W+ A S PV V +L +G D I W
Sbjct: 202 GPWLLVGM--PNLVKAWNIETN---ADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWR 256
Query: 399 -DIRNN--QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLM 569
+ N + S + GHT V L + + Y S SMD T+++W + +C++ +
Sbjct: 257 YNAATNCFEPSASLTGHTLAVVTLYVGANRLY--SGSMDKTIKVWSL----DNLQCIQTL 310
Query: 570 SGH 578
+ H
Sbjct: 311 TDH 313
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +3
Query: 6 ILIW--NVYGQC-ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 176
IL W N C E + GHT A++ L + LY+G+ D T+ VW + I+
Sbjct: 252 ILAWRYNAATNCFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIKVWSLDNLQCIQT 309
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
L H++ V S+ + L+S S DNT+K+W A
Sbjct: 310 LTDHSSVVMSLI---CWDQFLLSCSLDNTVKIWAA 341
Score = 31.9 bits (69), Expect = 0.35
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
++ GH V+G++L L + S D TLR+WD
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWD 179
Score = 31.5 bits (68), Expect = 0.47
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +3
Query: 6 ILIWNVYG-QCENVMVMKGHTGAIMQL-CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 179
I +W++ QC + + H+ +M L C+ L + + DNTV +W G ++
Sbjct: 296 IKVWSLDNLQC--IQTLTDHSSVVMSLICWD---QFLLSCSLDNTVKIWAAIEGGNLEVT 350
Query: 180 KGHA--NFVNSVSGAR--RGPELLVSASDDNTIKLWD 278
H + V ++ G +L+ A +DNT++L+D
Sbjct: 351 YTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYD 387
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 344
IKKL+GH N V R G +++ SDD +K+W +AS +T + +
Sbjct: 298 IKKLRGHRNAVYCAIFDRSG-RYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVS 356
Query: 345 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGA---YLLSNSMDNTL 515
+ S+ D VI++W + + ++GHT VT ++ S A LLS+S D T
Sbjct: 357 SNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTC 416
Query: 516 RIWDVR 533
RIWD R
Sbjct: 417 RIWDAR 422
Score = 61.3 bits (142), Expect = 5e-10
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
+N+ ++GH A+ F G ++ TG+ D V +W + T + +GH + ++
Sbjct: 296 QNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAV 355
Query: 216 ARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFND---TAEKILSSGVDN 383
+ L+ SAS+D I++W P++ + VT++ F+ + ++LSS D
Sbjct: 356 SSNN-ALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDG 414
Query: 384 VIKMWDIRNNQ 416
++WD R +Q
Sbjct: 415 TCRIWDARYSQ 425
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/85 (22%), Positives = 41/85 (48%)
Frame = +3
Query: 324 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 503
V +F+ + +++ D ++K+W + +GH +T L++S + A + S S
Sbjct: 308 VYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASN 367
Query: 504 DNTLRIWDVRPFAPTERCVKLMSGH 578
D +R+W + P + ++ GH
Sbjct: 368 DFVIRVWRL----PDGMPISVLRGH 388
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/80 (20%), Positives = 33/80 (41%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 251
+ + +S D + D + VW+ G+ + L GH+ + P + +SA
Sbjct: 600 VNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAG 659
Query: 252 DDNTIKLWDARKRNPVASFD 311
D +WD + P+ ++
Sbjct: 660 YDGKTIIWDIWEGIPIKVYE 679
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 62.1 bits (144), Expect = 3e-10
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H A+ L + LY+ + D T+ VW + ++ + H + +NSV +L+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSG--FDDLV 291
Query: 240 VSASDDNTIKLWDAR-----KRNPVAS--FDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
+ S D T+K+W ++ +A VT++ + + D ++ W
Sbjct: 292 FTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYW 351
Query: 399 DIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSG 575
+ + I KGH V L ++ G LLS S D + +W P + +C+ +++G
Sbjct: 352 ERSKRSFTGGILKGHKSAVLCLGIA--GNLLLSGSADKNICVWRRDPSDKSHQCLSVLTG 409
Query: 576 H 578
H
Sbjct: 410 H 410
Score = 55.6 bits (128), Expect = 3e-08
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Frame = +3
Query: 15 WNVYGQCENVMVMKGHTGAIMQ-----LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 179
W +NV+ G G+I++ + G LYTG+ + VW K L
Sbjct: 102 WGADFNEDNVLETNGLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVW--------KNL 153
Query: 180 KGHANFVNSVSGARRG----PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND 347
K HA F +S SG + + + + D I++W KR P + L
Sbjct: 154 KEHAGFKSS-SGLIKAIVIFGDRIFTGHQDGKIRIWKVSKRKP-----GKHKRVGTL--P 205
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
T + ++ S V N ++R N+ S+K K H D V+ LSL + L S+S D T+++W
Sbjct: 206 TFKSMVKSSV-NPKHFMEVRRNRNSVKTK-HNDAVSSLSLDVELGLLYSSSWDTTIKVWR 263
Query: 528 V 530
+
Sbjct: 264 I 264
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/142 (22%), Positives = 62/142 (43%)
Frame = +3
Query: 99 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 278
G ++TG D + +W V K+ G V ++ + +V +S + +
Sbjct: 173 GDRIFTGHQDGKIRIWKVS-----KRKPGKHKRVGTLPTFKS----MVKSSVNPKHFMEV 223
Query: 279 ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTG 458
R RN V + + V+S+ + + SS D IK+W I +++ I H D +
Sbjct: 224 RRNRNSVKTKHND-AVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINS 282
Query: 459 LSLSWDGAYLLSNSMDNTLRIW 524
+ +D + + S D T+++W
Sbjct: 283 VMSGFDD-LVFTGSADGTVKVW 303
Score = 28.7 bits (61), Expect = 3.3
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK-LKGHANFVNSVSGARR 224
V+ A+ L S +Y G++D V W+ + LKGH + V + A
Sbjct: 319 VLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIA-- 376
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 338
LL+S S D I +W +R+P D S+ SVL
Sbjct: 377 -GNLLLSGSADKNICVW---RRDP---SDKSHQCLSVL 407
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 62.1 bits (144), Expect = 3e-10
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Frame = +3
Query: 102 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
S + + D V +WDV + ++K H V S+ + P LL S SDD T
Sbjct: 597 SQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT------ 650
Query: 282 RKRNPVASFDSSYPVTSVLF-NDTAEKILSSGVDNVIKMWDIRNNQISL-KIKGHTDTVT 455
+ + + V V F +D+ + D+ + +D+RN +I L + GH+ TV+
Sbjct: 651 --GVSIGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVS 708
Query: 456 GLSLSWDGAYLLSNSMDNTLRIWDV 530
+ D + L+S+S DNTL++WD+
Sbjct: 709 YVKFV-DSSTLVSSSTDNTLKLWDL 732
Score = 33.5 bits (73), Expect = 0.12
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG------TRIKKLKGHANFVNSVS 212
M GH+ + + F D S L + +TDNT+ +WD+ + + GH N N V
Sbjct: 700 MIGHSKTVSYVKFV-DSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFV- 757
Query: 213 GARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEKILS 368
G + + S+ N + ++ PV S F+++ ++ + +D ++ I S
Sbjct: 758 GLSVSDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDASQFISS 811
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 61.7 bits (143), Expect = 4e-10
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 251
++ + +SP+G L G+ D T+ V+DV + +L+GH V S+ + P +L S S
Sbjct: 161 VLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS 220
Query: 252 DDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLK 428
DD + + DA + + S V SV + I + D +++WD++
Sbjct: 221 DDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQT 280
Query: 429 IKGHTDTV 452
+ H D V
Sbjct: 281 MSNHNDQV 288
Score = 56.8 bits (131), Expect = 1e-08
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHL-YTGATDNTVAVWDVPTGTRIKKLK------------ 182
+ V++ + + F P G+ L G + +V +WD + I L
Sbjct: 95 IAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDK 154
Query: 183 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAE 356
FV SV+ + G L S D TI ++D + + + + PV S++F+
Sbjct: 155 TSSKKFVLSVAWSPNGKRL-ACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDP 213
Query: 357 KILSSGVDNV-IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
++L SG D+ + M D + + GHT V + S DG + + S D T+R+WD++
Sbjct: 214 RVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK 273
Query: 534 PFAPTERCVKLMSGH 578
A ++ MS H
Sbjct: 274 MRA----AIQTMSNH 284
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV------- 209
M GHT ++ + SPDG + TG++D TV +WD+ I+ + H + V SV
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGG 298
Query: 210 SGARRGPELLVSASDDNTIKLWD 278
+G R G L S SDD ++ L+D
Sbjct: 299 TGVRAG--RLASVSDDKSVSLYD 319
Score = 47.2 bits (107), Expect = 9e-06
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
GH+ + L P G + + D+ V V+DV T I L+ + V + +G L
Sbjct: 58 GHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTIL 117
Query: 237 LVSASDDNTIKLWDARKRNPVASFDSSYP--------------VTSVLFNDTAEKILSSG 374
V+ ++KLWD +++ P V SV ++ +++
Sbjct: 118 AVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGS 177
Query: 375 VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRIWDVRPFAPTE 551
+D I ++D+ +++ +++GH V L S D L S S D + + D A +
Sbjct: 178 MDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD----AEGK 233
Query: 552 RCVKLMSGH 578
+ MSGH
Sbjct: 234 TLLGSMSGH 242
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +3
Query: 228 PELLVSASDDNTIKLWDARKRNPV-ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
P LL++ S D T+KLW + + V + S V ++ + + SS +D+ ++++D+
Sbjct: 30 PALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDV 89
Query: 405 RNNQISLKIKGHTDTVTGLSLSWDGAYL-LSNSMDNTLRIWD 527
N ++ V G+ G L ++ ++++WD
Sbjct: 90 DTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWD 131
Score = 31.5 bits (68), Expect = 0.47
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Frame = +3
Query: 108 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 287
L TG+ D TV +W ++ GH+ V +++ G + S+S D+ ++++D
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSG-IIAASSSIDSFVRVFDVDT 91
Query: 288 RNPVASFDS-SYPVTSVLFNDTAEKI-LSSGVDNVIKMWDIRNNQI--SLKI-----KGH 440
+A ++ V + F + ++ G +K+WD + ++ +L I
Sbjct: 92 NATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKP 151
Query: 441 TDTVTG----LSLSW--DGAYLLSNSMDNTLRIWDV 530
+D + LS++W +G L SMD T+ ++DV
Sbjct: 152 SDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDV 187
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 61.7 bits (143), Expect = 4e-10
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK--GHANFVNSV 209
E + +GH+GA+ S D S L TG+ D T +WDV +G + K A V+
Sbjct: 70 ERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFS 129
Query: 210 SGARRG---PELLVSASDDNTIKLWDARKRNPVA-------SFDSSYPVTSVLFNDTAEK 359
G + V S +K + V S D + ++ +
Sbjct: 130 VGDHLAVITTDHFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQT 189
Query: 360 ILSSGVDNVIKMWDIRNNQI---SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
I+S G D I++WD ++ S + GH + +T L + D ++ L+ S D T ++WD+
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Query: 531 R 533
R
Sbjct: 250 R 250
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/100 (31%), Positives = 49/100 (49%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 224
++MKGH + L ++ +G L++ A D+T VW G R+ +GH+ V R
Sbjct: 31 ILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAV-WCCDISR 89
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN 344
L++ S D T KLWD + + +F P SV F+
Sbjct: 90 DSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFS 129
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +3
Query: 285 KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 464
+ P+ P+T + +N + + S D+ +W N + +GH+ V
Sbjct: 27 RMRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCD 86
Query: 465 LSWDGAYLLSNSMDNTLRIWDVR 533
+S D + L++ S D T ++WDV+
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVK 109
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
GH AI LC + D SH TG+ D T +WD+ T T IK VN+V+ + +
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVP-VNAVAMSPLLNHV 276
Query: 237 LVSASDDNT-------------IKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 374
++ D + K +D + + + P+ ++ F+ + S G
Sbjct: 277 VLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGKSFSSGG 336
Query: 375 VDNVIKMWDIRNNQISLKI 431
D +++ +N ++KI
Sbjct: 337 EDGYVRLHHFDSNYFNIKI 355
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 137
E + +KGH G I L FSPDG +G D V
Sbjct: 308 EEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYV 341
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 60.9 bits (141), Expect = 7e-10
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLKGHANFVNSVS 212
E V + GHT + + + P+ +Y+ + D++V WDV TG + G A +N+V
Sbjct: 263 EAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKA--LNTVD 319
Query: 213 GARRGPELLVSASDDNTIKLWDARKRN---PVASFDS-SYPVTSVLFNDTAE-KILSSGV 377
L+ + D +++WD RK PV F S S +++ ++ ++ +LS+
Sbjct: 320 VGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 378 DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 521
D I +WD+R I H D V W G ++S D+ LRI
Sbjct: 380 DGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRI 426
Score = 46.8 bits (106), Expect = 1e-05
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCF--SPDGSHLY--TGATDNTVAVW------DVPTG 161
+W+ G C +++ +GH+GAI + S D + T + D T+ ++ V +
Sbjct: 135 VWSSAGSCSHIL--EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDST 192
Query: 162 TRI---KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 332
T++ K L+GH V SVS + G ++ S+S D TI LW+ N S S V
Sbjct: 193 TKVRAYKILRGHKASVQSVSAQKSG-NMVCSSSWDCTINLWNT---NESTSEGESVSVKK 248
Query: 333 VLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW-DGAYLLSNSMDN 509
N+ AE+ S G + + GHT V+ S+ W + + S+S D+
Sbjct: 249 RKGNNQAEESQSEG-------------EAVTSLVGHTQCVS--SVVWPEHDVIYSSSWDH 293
Query: 510 TLRIWDV 530
++R WDV
Sbjct: 294 SVRRWDV 300
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Frame = +3
Query: 159 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV- 335
G + L GH V+SV +++ S+S D++++ WD + + +V
Sbjct: 262 GEAVTSLVGHTQCVSSVVWPEH--DVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVD 319
Query: 336 LFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL-SWDGA---YLLSNSM 503
+ +++ I + G D ++++WD R S + + + +S W + +LLS S
Sbjct: 320 VGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 504 DNTLRIWDVRPFAP 545
D + +WD+R P
Sbjct: 380 DGKIMLWDLRTAWP 393
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 60.9 bits (141), Expect = 7e-10
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Frame = +3
Query: 33 CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR---IKKLKGHANFVN 203
C+ V+ + HT + +SP G L T + D T +W G+ I L+GH N V
Sbjct: 65 CKTVLE-ETHTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTLEGHENEVK 122
Query: 204 SVSGARRGPELLVSASDDNTIKLWDARKRN----PVASFDSSYPVTSVLFNDTAEKILSS 371
SVS G L + S D ++ +W+ + N + V V ++ T + + S
Sbjct: 123 SVSWNASG-SCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSC 181
Query: 372 GVDNVIKMWDIRNNQ--------ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
DN IK+W ++ + GH+ TV +S + G +++ S D TL+IW
Sbjct: 182 SYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 52.4 bits (120), Expect = 2e-07
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Frame = +3
Query: 12 IWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR---IKKL 179
IW YG + E + ++GH + + ++ GS L T + D +V +W+V G L
Sbjct: 100 IWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVL 159
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLW----DARKRNPVASFDS-----SYPVTS 332
GH V V ++L S S DNTIK+W D + V + S V S
Sbjct: 160 TGHTQDVKMVQW-HPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWS 218
Query: 333 VLFNDTAEKILSSGVDNVIKMW 398
+ FN +K+++ D +K+W
Sbjct: 219 ISFNAAGDKMVTCSDDLTLKIW 240
Score = 47.6 bits (108), Expect = 7e-06
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSH-------LYTGATDNTVAVWDVPTGTRIKKLK-----G 185
+ ++GHT + + ++P SH L + + DNTV +W+ + +R K
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDS-SYPVTSVLFNDTAE 356
H V S + + G +LL +AS D T +W + +++ + V SV +N +
Sbjct: 73 HTRTVRSCAWSPSG-QLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGS 131
Query: 357 KILSSGVDNVIKMWDI-RNNQ--ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+ + D + +W++ N+ + + GHT V + L S S DNT+++W
Sbjct: 132 CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
Query: 528 VRPFAPTERCVKLMSGHQHN 587
+CV+ + G +N
Sbjct: 192 SEDDDGEYQCVQTL-GESNN 210
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGAR-RGPELLVSASDDNTIKLW 275
+KK K H N VNSV + G LL SASDD +K+W
Sbjct: 310 LKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIW 346
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 60.9 bits (141), Expect = 7e-10
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR-------NPVASFDSSYPV 326
+K KGH + R E ++++S+D ++++WD P + PV
Sbjct: 271 LKNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPV 330
Query: 327 TSVLFNDTAEKILSSGVDNVIKMWDIR---NNQISLKI-KGHTDTVTGLSLSWDGAYLLS 494
T+ ++ ++I D I++W ++ ++ + + K HTD +T + S DG LLS
Sbjct: 331 TTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLS 390
Query: 495 NSMDNTLRIWDVR 533
S D +L++WD+R
Sbjct: 391 RSFDGSLKVWDLR 403
Score = 41.1 bits (92), Expect = 6e-04
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +3
Query: 12 IWNVYGQCENVMVMK---GHTGAI-MQLC-FSPDGSHLYTGATDNTVAVWDVPTG----T 164
IW+V V+K G + + C + DG + G D ++ +W + G
Sbjct: 305 IWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRP 364
Query: 165 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFD---SSYPVTS 332
I K H + + SV + G +L+S S D ++K+WD R+ + + F+ + YP T+
Sbjct: 365 DIYVGKAHTDDITSVKFSSDG-RILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTN 423
Query: 333 VLFNDTAEKILS 368
V F+ + IL+
Sbjct: 424 VAFSPDEQIILT 435
Score = 38.7 bits (86), Expect = 0.003
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Frame = +3
Query: 126 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP-VA 302
DN + +P I+ LKGH V+S++ G +L S S D T++++D + N +
Sbjct: 157 DNEENRYQIPLSNEIQ-LKGHTKIVSSLAVDSAGARVL-SGSYDYTVRMYDFQGMNSRLQ 214
Query: 303 SFDSSYP-----VTSVLFNDTAEKILSSGVDNVIKMWD---------IRNNQISLKIKGH 440
SF P V SV ++ T+ + L K++D ++ + +K
Sbjct: 215 SFRQIEPSEGHQVRSVSWSPTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNT 274
Query: 441 TDTVTGLSLS-WDGAY---LLSNSMDNTLRIWDVRPFAPTERCVK 563
+ GL+ W +L++S D +LRIWDV F + +K
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIK 319
Score = 34.3 bits (75), Expect = 0.066
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 6 ILIWNV---YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
I IW++ +G ++ V K HT I + FS DG L + + D ++ VWD+
Sbjct: 351 IQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDL 402
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Frame = +3
Query: 114 TGATDNTVAVWDVP---TGTRI--KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 278
T + D ++ +WDV + T++ KL + R + + D +I++W
Sbjct: 296 TSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWS 355
Query: 279 ARK---RNPVASFDSSYP--VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKI 431
+ P ++ +TSV F+ +LS D +K+WD+R + +LK+
Sbjct: 356 LKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKV 411
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 60.9 bits (141), Expect = 7e-10
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
F PDG L TG + V +WDV + + K GH + S+S + G L +A D +
Sbjct: 362 FHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG--V 419
Query: 267 KLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVD-NVIKMWDIR---NNQISLKI 431
+LWD RK +FD +P SV F+ + + + D V + ++ N +L
Sbjct: 420 RLWDLRKLKNFRTFD--FPDANSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPD 477
Query: 432 KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
T T + D Y+ SMD LRI+
Sbjct: 478 LSGTGKATSVKFGLDSKYIAVGSMDRNLRIF 508
Score = 59.7 bits (138), Expect = 2e-09
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG---TRIKKLKGHANFVNSVSGAR 221
+ GH+ + + F D + T ++D TV +W T LK H+ V +V+
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVT-VH 318
Query: 222 RGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSGVDNVI 389
+ VSAS D+T +D +A ++ T+ F+ + + +++
Sbjct: 319 ATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIV 378
Query: 390 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
K+WD+++ K GH +T +S S +G +L + ++D +R+WD+R
Sbjct: 379 KIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG-VRLWDLR 425
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Frame = +3
Query: 114 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 293
TG D T ++D P+G + L GH+ V S+ +L+++AS D T+++W +
Sbjct: 239 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFV-GDTDLVLTASSDKTVRIWGCSEDG 297
Query: 294 PVAS----FDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTD---TV 452
S D S V +V + T + +S+ +D+ +D+ + ++ ++
Sbjct: 298 NYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNY 357
Query: 453 TGLSLSWDGAYLLSNSMDNTLRIWDVR 533
T + DG L + + + ++IWDV+
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVK 384
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
I + G+D ++D + QI + GH+ VT + D +L+ S D T+RIW
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIW 291
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 60.5 bits (140), Expect = 9e-10
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Frame = +3
Query: 66 GAIMQLCFSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 242
G+I L + + + TD V +WDV +G ++ L+ + V S ++ G +
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGR--YI 202
Query: 243 SASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQI 419
+ +D +T+K WDA V S+D + S L + EK ++ G D ++++D +
Sbjct: 203 TTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEE 262
Query: 420 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTE 551
KGH V + + G S S D T+RIW P P E
Sbjct: 263 IGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANPEE 306
Score = 58.8 bits (136), Expect = 3e-09
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
V GH+ ++ L +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS-SCL 69
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
SAS D + KLWDA + + SF+ + V + F++ + +L+ G + +++++
Sbjct: 70 DNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVF 129
Query: 399 DI-RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD-NTLRIWDVR 533
D+ R + ++ ++ L+ +LS+ D +R+WDVR
Sbjct: 130 DMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVR 176
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +3
Query: 99 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 278
G G D V V+D TG I KGH V+ V G S S+D TI++W
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSY-ASGSEDGTIRIWQ 298
Query: 279 ARKRNPVASFDSS 317
NP + SS
Sbjct: 299 TTPANPEENETSS 311
Score = 31.1 bits (67), Expect = 0.62
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 146
E + KGH G + + F+P G +G+ D T+ +W
Sbjct: 261 EEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 60.5 bits (140), Expect = 9e-10
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Frame = +3
Query: 66 GAIMQLCFSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 242
G+I L + + + TD V +WDV +G ++ L+ + V S ++ G +
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGR--YI 202
Query: 243 SASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQI 419
+ +D +T+K WDA V S+D + S L + EK ++ G D ++++D +
Sbjct: 203 TTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEE 262
Query: 420 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTE 551
KGH V + + G S S D T+RIW P P E
Sbjct: 263 IGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANPEE 306
Score = 58.8 bits (136), Expect = 3e-09
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
V GH+ ++ L +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS-SCL 69
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
SAS D + KLWDA + + SF+ + V + F++ + +L+ G + +++++
Sbjct: 70 DNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVF 129
Query: 399 DI-RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD-NTLRIWDVR 533
D+ R + ++ ++ L+ +LS+ D +R+WDVR
Sbjct: 130 DMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVR 176
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +3
Query: 99 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 278
G G D V V+D TG I KGH V+ V G S S+D TI++W
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSY-ASGSEDGTIRIWQ 298
Query: 279 ARKRNPVASFDSS 317
NP + SS
Sbjct: 299 TTPANPEENETSS 311
Score = 31.1 bits (67), Expect = 0.62
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 146
E + KGH G + + F+P G +G+ D T+ +W
Sbjct: 261 EEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 60.1 bits (139), Expect = 1e-09
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG----TR--IKKLKGHANFVNSVSGA 218
GHT + L +S G+ +G DN V +WD TR + + + H V +++
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 219 RRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDNV 386
LL + D IK W+ + S ++ V S+L++ + ++LSS N
Sbjct: 310 PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQ 369
Query: 387 IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ +W + ++ GHT V ++ S +G + S + D LR+W+V
Sbjct: 370 LTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = +3
Query: 6 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W+ G ++ + G + + ++ DG L G ++ V +WD + +++ L+
Sbjct: 148 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLR 207
Query: 183 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTA 353
GH + V S++ +L + D I D R R+ + + V + ++++
Sbjct: 208 GGHESRVGSLAWDN---HILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESG 264
Query: 354 EKILSSGVDNVIKMWD 401
K S G DNV+ +WD
Sbjct: 265 NKQASGGNDNVVHIWD 280
Score = 41.1 bits (92), Expect = 6e-04
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = +3
Query: 258 NTIKLWDARKRNP---VASFDSSYPVTSVLFNDTAEKI-LSSGVDNV-IKMWDIRNNQIS 422
+T+ LWDA + V + PVTS+ N T + + L+ G+DN +++WD +N+
Sbjct: 146 DTVYLWDASSGSTSELVTIDEDKGPVTSI--NWTQDGLDLAVGLDNSEVQLWDCVSNRQV 203
Query: 423 LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
++G ++ G SL+WD L + MD + DVR
Sbjct: 204 RTLRGGHESRVG-SLAWDNHILTTGGMDGKIVNNDVR 239
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
Q+ +W Y + + GHT ++ + SP+G + + A D + +W+V
Sbjct: 369 QLTLWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 60.1 bits (139), Expect = 1e-09
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
GH G I L D + +++G+ D +V +WD + +K L+ H+++V ++ E
Sbjct: 255 GHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPH----ET 307
Query: 237 LVSASDDNTIKLWDARKRNPVASFDSSYPVT--SVLFNDTAEKILSSGVDNVIKMWDIRN 410
++++ + + +WD P+A ++ T S+ + T + + + G D IKM++IR
Sbjct: 308 TLASTSGSDVYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRR 367
Query: 411 ----NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERC 557
+ L + T SLS++ +L+S S D L + DVR T RC
Sbjct: 368 YGSETSVVLISQWMPHTSPVYSLSFEFPWLVSASGDGKLALIDVRKLLKTNRC 420
Score = 41.9 bits (94), Expect = 3e-04
Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
++ + GHT A+ + ++T D+ V +WD+ G I K + +++
Sbjct: 154 SIDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAA- 212
Query: 219 RRGPELLVSASDDNTIKLWDA--------------RKRNPVASFDSSYPVTSVLFNDTAE 356
+LLV+ D I W + +++ + P+TS+ + T+
Sbjct: 213 --DTKLLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTS- 269
Query: 357 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRP 536
I S D +++WD R++ +K H+D V GL+ L+++ + + IWDV
Sbjct: 270 -IFSGSWDMSVRIWD-RSSMKCVKTLRHSDWVWGLA---PHETTLASTSGSDVYIWDVSS 324
Query: 537 FAP 545
P
Sbjct: 325 ETP 327
Score = 34.3 bits (75), Expect = 0.066
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV---PTGTRIKK 176
+ IW+V + ++ H G L S G L+TG D + ++++ + T +
Sbjct: 317 VYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRRYGSETSVVL 376
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 287
+ + V LVSAS D + L D RK
Sbjct: 377 ISQWMPHTSPVYSLSFEFPWLVSASGDGKLALIDVRK 413
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 60.1 bits (139), Expect = 1e-09
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Frame = +3
Query: 30 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 209
+C + +K H+ A+ L + D LY+ + D TV VW + I+ +K H + VNSV
Sbjct: 125 RCRTALWIK-HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV 183
Query: 210 SGARRGPELLVSASDDNTIKLWDAR---KRNPVASFDS----SYPVTSVLFNDTAEKILS 368
+ A L+ + S D T+K+W KR + F + VT+++ + A + S
Sbjct: 184 TTAE---SLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMA--VYS 238
Query: 369 SGVDNVIKMWDIRNNQISLK----IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRP 536
D + W++ + ++ LK K H V L ++ G L S + D + +W R
Sbjct: 239 GSSDGAVNFWEMGDKKL-LKHCEVFKKHRLAV--LCIAAAGKLLFSGAADKKICVW--RR 293
Query: 537 FAPTERCVKLMSGH 578
CV +++GH
Sbjct: 294 EGKVHTCVSVLTGH 307
Score = 46.8 bits (106), Expect = 1e-05
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Frame = +3
Query: 108 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 287
LYTG+ +N + VW K ++ V ++ +R + + D I++W
Sbjct: 37 LYTGSDNNYIRVW--KNLNEFSGFKSNSGLVKAIVISREAK--VFTGHQDGKIRVWKTSS 92
Query: 288 RNP-VASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 464
+NP V + S P + +L S V ++R + +L IK H+D V+ LS
Sbjct: 93 KNPRVYTRAGSLP--------ALKDVLKSSV-KPSNYVEVRRCRTALWIK-HSDAVSCLS 142
Query: 465 LSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGH 578
L+ D L S S D T+++W + +C++ + H
Sbjct: 143 LAEDQGLLYSASWDRTVKVWRIHDL----KCIESIKAH 176
Score = 31.1 bits (67), Expect = 0.62
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 12/63 (19%)
Frame = +3
Query: 3 QILIWNVYGQCEN-VMVMKGHTGAIMQLCF-SPDGSH----------LYTGATDNTVAVW 146
+I +W G+ V V+ GHTG + L P G LY+G+ D +V VW
Sbjct: 287 KICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVW 346
Query: 147 DVP 155
VP
Sbjct: 347 RVP 349
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
+LL + SD+N I++W + N + F S+ + + K+ + D I++W
Sbjct: 35 DLLYTGSDNNYIRVW--KNLNEFSGFKSNSGLVKAIVISREAKVFTGHQDGKIRVW 88
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 59.7 bits (138), Expect = 2e-09
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWD-------VPTGTRIKKLKGHANFVNSVSG 215
GHT + L +S G L +G N V +WD PT + + + H V +++
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Query: 216 ARRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDN 383
LL + D IK W+ + S ++ V S+L++ ++LSS N
Sbjct: 307 CPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQN 366
Query: 384 VIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ +W + ++ GHT V ++ S +G + S + D LR+W+V
Sbjct: 367 QLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 415
Score = 49.6 bits (113), Expect = 2e-06
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Frame = +3
Query: 120 ATDNTVAVWDVPTGT--RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 293
A +TV +WD +G+ + + V S++ + G +L V D++ ++LWD
Sbjct: 140 ALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGL-DNSEVQLWDFVSNR 198
Query: 294 PVASFDSSYP--VTSVLFNDTAEKILSSGVDNVIKMWDIR-NNQISLKIKGHTDTVTGLS 464
V + + V S+ +N+ + + G+D I D+R + I GHT+ V GL
Sbjct: 199 QVRTLIGGHESRVGSLAWNNHI--LTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLK 256
Query: 465 LSWDGAYLLSNSMDNTLRIWDVRPFAPTE 551
S G L S N + IWD R A ++
Sbjct: 257 WSESGKKLASGGNYNVVHIWDHRSVASSK 285
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV----PTGTRI 170
Q+ +W Y + + GHT ++ + SP+G + + A D + +W+V P T+
Sbjct: 367 QLTLWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTTKK 425
Query: 171 KKLKGHANFVNSVSGAR 221
K + + V+ R
Sbjct: 426 AASKNYLELFSHVNSLR 442
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND 347
++ H V +V G ++ S S+D ++K+WD R R F S PV +V+ +
Sbjct: 77 VRNFVSHTKNVMAVGFQYTG-HMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTVVLHP 135
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDT-VTGLSLSWDGAYLLSNSMDNTLRIW 524
+++S + I++WD+R + S ++ T + L++ WDG +++ + T +W
Sbjct: 136 NQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVW 195
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
++ H I++ SP +L T ++D TV +W++ K L GH +V + G
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDG- 271
Query: 231 ELLVSASDDNTIKLWDAR 284
E LV+AS D T +LW R
Sbjct: 272 EYLVTASSDTTARLWSMR 289
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Frame = +3
Query: 93 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVSASDDNTIK 269
P+ + L +G + + VWD+ +L + S++ G ++V+A+D T
Sbjct: 135 PNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGT-MVVAANDRGTCY 193
Query: 270 LWDAR-KRNPVASFDSSYP-------VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 425
+W + +R + F+ + + L + + + ++ D +K+W++ ++
Sbjct: 194 VWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEK 253
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ GH V S DG YL++ S D T R+W +R
Sbjct: 254 VLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMR 289
Score = 48.4 bits (110), Expect = 4e-06
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Frame = +3
Query: 228 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEK-ILSSGVDNVIKMWD 401
P L +AS D TI+LW AR SF YP V T EK L + + I+++D
Sbjct: 10 PVYLATASHDQTIRLWQARTGRCYFSF--RYPDLHVNRLELTPEKGKLVAACNPHIRLFD 67
Query: 402 IRNNQISLKIKG---HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+R+ + ++ HT V + + G + S S D +++IWD+R
Sbjct: 68 LRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLR 114
Score = 47.2 bits (107), Expect = 9e-06
Identities = 39/185 (21%), Positives = 81/185 (43%), Gaps = 11/185 (5%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL- 236
HT +M + F G +Y+G+ D +V +WD+ R+++ + V+ V+ P
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDL----RVRECQREFRSVSPVNTVVLHPNQT 138
Query: 237 -LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 407
L+S + I++WD R + P+ S+ ++++ +W
Sbjct: 139 ELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSL 198
Query: 408 NNQISL-------KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKL 566
+ ++ K++ H + LS YL + S D T++IW++ F + K+
Sbjct: 199 CERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGF----KLEKV 254
Query: 567 MSGHQ 581
++GH+
Sbjct: 255 LTGHE 259
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ IWN+ G + V+ GH + FS DG +L T ++D T +W + G +
Sbjct: 241 VKIWNLDG-FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQA 299
Query: 186 H 188
H
Sbjct: 300 H 300
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 59.7 bits (138), Expect = 2e-09
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 9/182 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H A+ L S DG +Y+ + D T+ +W + +K H + VN+++ + G +
Sbjct: 194 HADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNG--TV 249
Query: 240 VSASDDNTIKLW---DARKRNP-VASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
+ S D I++W KR+ VA+ + V ++ ND + S D I +W+
Sbjct: 250 YTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWER 309
Query: 405 R--NNQISLK--IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMS 572
+N ++++ ++GH + LSL LLS S D T+RIW P + + C++++S
Sbjct: 310 EDTSNYMAVRGALRGHDKAI--LSLFNVSDLLLSGSADRTVRIWRRGPDS-SYSCLEVLS 366
Query: 573 GH 578
GH
Sbjct: 367 GH 368
Score = 52.4 bits (120), Expect = 2e-07
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG----TRIKKLKGHANFVNSVSGA 218
+K H A+ + S +G+ +YTG+ D + VW PTG T + L+ H + VN+++
Sbjct: 231 IKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALN 289
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSY----PVTSVLFNDTAEKILSSGVDNV 386
G +L S S D +I +W+ + + + LFN ++ +LS D
Sbjct: 290 DDG-SVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFN-VSDLLLSGSADRT 347
Query: 387 IKMW----DIRNNQISLKIKGHTDTVTGLSLSW-----DGAYLLSNSMDNTLRIWDVRPF 539
+++W D + + + + GHT V L+ D ++S S+D ++ W V
Sbjct: 348 VRIWRRGPDSSYSCLEV-LSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVT 406
Query: 540 AP 545
P
Sbjct: 407 KP 408
Score = 47.2 bits (107), Expect = 9e-06
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW---DVPTGTRIK-KLKGHANFVNSV 209
V ++ H A+ L + DGS L++G+ D ++ VW D ++ L+GH + S+
Sbjct: 273 VATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL 332
Query: 210 SGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDT 350
+LL+S S D T+++W +R P DSSY VL T
Sbjct: 333 FNV---SDLLLSGSADRTVRIW---RRGP----DSSYSCLEVLSGHT 369
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 59.3 bits (137), Expect = 2e-09
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 344
IK+L+GH N V R G +++ SDD +K+W +AS +T + +
Sbjct: 238 IKRLRGHRNAVYCAILDRSG-RYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVS 296
Query: 345 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS---WDGAYLLSNSMDNTL 515
I S+ D VI++W + + ++GHT VT ++ S LLS+S D T
Sbjct: 297 SNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTC 356
Query: 516 RIWDVR--PFAP 545
RIWD R FAP
Sbjct: 357 RIWDARGAQFAP 368
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR--G 227
+GH G I L S + + + + D + VW +P G + L+GH V +++ + R
Sbjct: 284 RGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGS 343
Query: 228 PELLVSASDDNTIKLWDAR 284
P L+S+SDD T ++WDAR
Sbjct: 344 PYQLLSSSDDGTCRIWDAR 362
Score = 57.2 bits (132), Expect = 8e-09
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
+N+ ++GH A+ G ++ TG+ D V VW + T + +GH + ++
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAV 295
Query: 216 ARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFN---DTAEKILSSGVDN 383
+ + SAS+D I++W PV+ + VT++ F+ + ++LSS D
Sbjct: 296 SSNN-IFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDG 354
Query: 384 VIKMWDIRNNQISLKI 431
++WD R Q + +I
Sbjct: 355 TCRIWDARGAQFAPRI 370
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/85 (21%), Positives = 40/85 (47%)
Frame = +3
Query: 324 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 503
V + + + +++ D ++K+W + +GH +T L++S + ++ S S
Sbjct: 248 VYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASN 307
Query: 504 DNTLRIWDVRPFAPTERCVKLMSGH 578
D +R+W + P V ++ GH
Sbjct: 308 DCVIRVWRLPDGLP----VSVLRGH 328
Score = 37.1 bits (82), Expect = 0.009
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 251
+ + +S D + D + VW+ G+ + L GH + P + +SA
Sbjct: 547 VNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAG 606
Query: 252 DDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 416
D +WD + P+ +D S Y + F+ I+ S D+V +++ + Q
Sbjct: 607 YDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILS--DDVGQLYILSTGQ 660
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQ 581
+++GH + V L G Y+++ S D +++W + T C+ GH+
Sbjct: 240 RLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSM----DTAYCLASCRGHE 287
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Frame = +3
Query: 126 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 305
D V +WD TG + H SV + P VS SDD ++KLW ++ + +
Sbjct: 787 DGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGT 846
Query: 306 FDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQIS-LKIKGHTDTVTGLSLSWDG 479
S V V F+ + +L+ G D + +D+R + + GH V+ + D
Sbjct: 847 IWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDS 905
Query: 480 AYLLSNSMDNTLRIWDV 530
++S S DN+L++W++
Sbjct: 906 ETIVSASTDNSLKLWNL 922
Score = 41.1 bits (92), Expect = 6e-04
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 10/178 (5%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ IW+ G + H + FSP D + +G+ D +V +W + + +
Sbjct: 790 VQIWDA-GTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIW 848
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFNDTAEK 359
AN V V + LL S D + +D R + P + S + +E
Sbjct: 849 SPAN-VCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSET 907
Query: 360 ILSSGVDNVIKMWDIRNNQ--------ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
I+S+ DN +K+W++ SL KGHT+ + LS Y+ S N
Sbjct: 908 IVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGSETN 965
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 58.8 bits (136), Expect = 3e-09
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Frame = +3
Query: 114 TGATDNTVAVWDVPTGT---RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 284
+ + D + WD+ TGT + K A+ + +V L + + +I W
Sbjct: 8 SSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYWSWT 67
Query: 285 KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 464
K P+ ++ N+ ++ G+ I +W++ ++ K GH +VT L
Sbjct: 68 KPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLV 127
Query: 465 LSWDGAYLLSNSMDNTLRIWD-VRPFAPTERCVKLMSGHQHNFEKNLL 605
S D + L+S S D ++R+W +R F +R + + ++HNF ++ +
Sbjct: 128 FSGDDSLLVSGSQDGSIRVWSLIRLFDDFQR-QQGNTLYEHNFNEHTM 174
Score = 45.2 bits (102), Expect = 4e-05
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 251
I L + +G++L G + +W+V TG +KK GH V + + LLVS S
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFS-GDDSLLVSGS 139
Query: 252 DDNTIKLW-------DARKRNPVASFDSSY-----PVTSVL--FNDTAEKILSSGVDNVI 389
D +I++W D +++ ++ ++ VT ++ + I+SS D
Sbjct: 140 QDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTC 199
Query: 390 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 521
K+W + ++ LK + L+L G + + D+ + I
Sbjct: 200 KVWSLSRGKL-LKNIIFPSVINALALDPGGCVFYAGARDSKIYI 242
Score = 35.1 bits (77), Expect = 0.038
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 19/176 (10%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV---------PTGTRI--KKLKGHANFVN 203
GH ++ L FS D S L +G+ D ++ VW + G + H V
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVT 177
Query: 204 SVSGARRG-PELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGV 377
+ G +++S+S+D T K+W + + + +P V + L D + +G
Sbjct: 178 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNI--IFPSVINALALDPGGCVFYAGA 235
Query: 378 -DNVIKMWDIR-----NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
D+ I + I Q+ + +T L+ DG L+S S D + +WD
Sbjct: 236 RDSKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWD 291
Score = 31.5 bits (68), Expect = 0.47
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
AI L + DG+ L +G+ D V VWD P R H + G+R+GP
Sbjct: 265 AITCLAYCADGNLLISGSEDGVVCVWD-PKSLR------HVRTLIHAKGSRKGP 311
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 58.8 bits (136), Expect = 3e-09
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Frame = +3
Query: 66 GAIMQLCFSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 242
G+I L + + + TD V +WDV +G ++ L+ + V S ++ G +
Sbjct: 146 GSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGR--YI 202
Query: 243 SASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQI 419
+ +D +T+K WDA V S+D + S L + K ++ G D ++++D +
Sbjct: 203 TTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKE 262
Query: 420 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTE 551
KGH V + + G S S D T+RIW P P E
Sbjct: 263 IGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQTGPVNPEE 306
Score = 58.0 bits (134), Expect = 5e-09
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
+V GH+ ++ L +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWS-SC 68
Query: 216 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKM 395
SAS D + KLWDA + + SF+ + V + F+ + +++ G + ++++
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRV 128
Query: 396 WDI-RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD-NTLRIWDVR 533
+D+ R + +I ++ L+ +LS+ D +R+WDVR
Sbjct: 129 FDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVR 176
Score = 31.1 bits (67), Expect = 0.62
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 146
KGH G + + F+P G +G+ D T+ +W
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 58.4 bits (135), Expect = 4e-09
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Frame = +3
Query: 237 LVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEKILSS---GVDNVIKMWDI 404
+V+ASDD++I+L+D + + +S Y V V F ++ S G D+ +++ +
Sbjct: 48 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 107
Query: 405 RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLM 569
+N+ KGH D V LSL G +S S+D T+ +WD R E+C L+
Sbjct: 108 HDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQR----VEKCQGLL 158
Score = 43.2 bits (97), Expect = 1e-04
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
KGH ++ L G +G+ D TV +WD R++K +G + A
Sbjct: 117 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD----QRVEKCQGLLRVQGRPAAAYDDQG 172
Query: 234 LLVSASDDNTIKLWDAR--KRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKMW 398
L+ + + I+++DAR ++ P F ++ V F++ +L + +D I +
Sbjct: 173 LIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVL 232
Query: 399 D-IRNNQIS-LKIKGHT-DTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
D R +S +K ++ + S +G +++S S D + W VR
Sbjct: 233 DSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVR 280
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 75 MQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ FSP+G + +G+ D + W V +G ++ G
Sbjct: 254 LDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMG 290
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 58.4 bits (135), Expect = 4e-09
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Frame = +3
Query: 237 LVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEKILSS---GVDNVIKMWDI 404
+V+ASDD++I+L+D + + +S Y V V F ++ S G D+ +++ +
Sbjct: 45 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 104
Query: 405 RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLM 569
+N+ KGH D V LSL G +S S+D T+ +WD R E+C L+
Sbjct: 105 HDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQR----VEKCQGLL 155
Score = 43.2 bits (97), Expect = 1e-04
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
KGH ++ L G +G+ D TV +WD R++K +G + A
Sbjct: 114 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD----QRVEKCQGLLRVQGRPAAAYDDQG 169
Query: 234 LLVSASDDNTIKLWDAR--KRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKMW 398
L+ + + I+++DAR ++ P F ++ V F++ +L + +D I +
Sbjct: 170 LIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVL 229
Query: 399 D-IRNNQIS-LKIKGHT-DTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
D R +S +K ++ + S +G +++S S D + W VR
Sbjct: 230 DSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVR 277
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 75 MQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ FSP+G + +G+ D + W V +G ++ G
Sbjct: 251 LDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMG 287
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 58.0 bits (134), Expect = 5e-09
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 14/187 (7%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPEL 236
H A+ L S DGS LY+ + D + +W + + K H + +N++ ++ G
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG--F 248
Query: 237 LVSASDDNTIKLWDA--RKRNPVASFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMWD-- 401
+ + S D IK+W+ +K + VA+ + L K+L SG D I +W+
Sbjct: 249 VYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERL 308
Query: 402 IRNNQISL------KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTE--RC 557
I + L ++GH + L+++ D +LS S D +LR+W R E C
Sbjct: 309 INGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSGSADKSLRVWR-RGLMEKEGYSC 365
Query: 558 VKLMSGH 578
+ ++ GH
Sbjct: 366 LAVLEGH 372
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Frame = +3
Query: 3 QILIWNVYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 179
+I +WN + + V + H A+ L S DG LY+GA D ++ VW+ ++L
Sbjct: 257 KIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEEL 316
Query: 180 KGHANFVNSVSGARR-------GPELLVSASDDNTIKLW 275
H + V ++ G R+ +L++S S D ++++W
Sbjct: 317 --HMSVVGALRGHRKAIMCLAVASDLVLSGSADKSLRVW 353
Score = 42.7 bits (96), Expect = 2e-04
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR--IKKLKGHANFVNSVSGAR 221
+ K H AI + S DG +YTG+ D + VW+ + L H + VN+++ +
Sbjct: 230 IEKAHDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISE 288
Query: 222 RGPELLVSASDDNTIKLW-------DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVD 380
G ++L S + D +I +W D V + + ++ +LS D
Sbjct: 289 DG-KVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASDLVLSGSAD 347
Query: 381 NVIKMW-----DIRNNQISLKIKGHTDTVTGLSLSWDGA--------YLLSNSMDNTLRI 521
+++W + ++GHT V L++S + + S S+D +L++
Sbjct: 348 KSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKV 407
Query: 522 WDVR 533
W++R
Sbjct: 408 WNLR 411
Score = 41.5 bits (93), Expect = 4e-04
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Frame = +3
Query: 108 LYTGATDNTVAVWD-VPTGTRIKKLKGHANFVNSVSGARRG----PELLVSASDDNTIKL 272
LYTG++++ + VW P + N V + +G + + L+SA D+ I++
Sbjct: 82 LYTGSSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVKSLVILGDKLISAHQDHKIRV 141
Query: 273 WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTV 452
W + T ND + + SS ++R ++ + H D V
Sbjct: 142 WKIIDESNRRGQKYKCVATLPTMNDRFKTLFSSK-----SYVEVRRHKKCTWVH-HVDAV 195
Query: 453 TGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
+ L+LS DG+ L S S D + +IW F
Sbjct: 196 SSLALSQDGSLLYSASWDRSFKIWRTSDF 224
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 57.6 bits (133), Expect = 6e-09
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Frame = +3
Query: 114 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR-KR 290
+G+ D V VWDV TG ++ H V++V+ PE+L+S S D T+ L D R
Sbjct: 232 SGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPS 291
Query: 291 NPVASFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQI--SLKIKGHTDTVTGL 461
N + + V + ++ +E + S D +K +D R + + S I H V+ +
Sbjct: 292 NSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSI 351
Query: 462 SLSWDGAYLL-SNSMDNTLRIWDVRPFAPT 548
S + LL + S D ++++WD+ P+
Sbjct: 352 SYNIHAPNLLATGSADESVKLWDLSNNQPS 381
Score = 33.1 bits (72), Expect = 0.15
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Frame = +3
Query: 99 GSHLYTGATDNTVAVWD------VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 260
G+ + G ++++ +WD V ++ ++ G F + + R ++ S S+D
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRN--IVASGSEDK 237
Query: 261 TIKLWD-ARKRNPVASFDSSYPVTSVLFND-TAEKILSSGVDNVIKMWDIRNNQISLKIK 434
+K+WD A + V V +V +N+ T E +LS D + + D R+ S +K
Sbjct: 238 KVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNS-GLK 296
Query: 435 GHTDTVTGLSLSWD 476
T+ L+WD
Sbjct: 297 WSTEAKVE-KLAWD 309
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 56.4 bits (130), Expect = 1e-08
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Frame = +3
Query: 27 GQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL------KG 185
G C + ++GH+ L +S HL +G+ D + +WD+ + K L K
Sbjct: 166 GACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKA 225
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDS-SYPVTSVLFNDTA 353
H V V+ R L S DD + +WD R PV S + S V + FN
Sbjct: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFN 285
Query: 354 EKILSSG-VDNVIKMWDIRNNQISL-KIKGHTDTVTGLSLSW---DGAYLLSNSMDNTLR 518
E ++++G D +K++D+R +L H + V + W + L S + L
Sbjct: 286 EWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEV--FQVGWNPKNETILASCCLGRRLM 343
Query: 519 IWDV 530
+WD+
Sbjct: 344 VWDL 347
Score = 37.9 bits (84), Expect = 0.005
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Frame = +3
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSYPVTSVLFND 347
KL+GH++ +S ++ L+S SDD I LWD A +N + + D
Sbjct: 173 KLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVED 232
Query: 348 TA-----EKILSS-GVDNVIKMWDIRNNQISLKIK---GHTDTVTGLSLS-WDGAYLLSN 497
A E + S G D + +WD+R+ S ++ H+ V L+ + ++ + +
Sbjct: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATG 292
Query: 498 SMDNTLRIWDVR 533
S D T++++D+R
Sbjct: 293 STDKTVKLFDLR 304
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 56.4 bits (130), Expect = 1e-08
Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Frame = +3
Query: 12 IWNV--YGQCE-NVMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKL 179
IWN+ +G + + +KGHT ++ QLC+ P S L T + D +V +WD +G +++
Sbjct: 46 IWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQV 105
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE- 356
+ +N ++ G + V DD + + D RK P+ +Y V + +N +
Sbjct: 106 ELSGENIN-ITYKPDGTHVAVGNRDDE-LTILDVRKFKPLHRRKFNYEVNEIAWNMPGDF 163
Query: 357 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
L++G+ +++ + + + HT +++ G Y S D+ + +WD+
Sbjct: 164 FFLTTGL-GTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDI 220
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/122 (23%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTG-TRIK--KLKGHANFVNSVSGAR 221
+GH + + ++ +G+ L +G+ D T +W++ P G ++ K +LKGH + V+ +
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 222 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
+ +L+ +AS D +++LWDAR + S ++ + + D+ + + D
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELTILD 136
Query: 402 IR 407
+R
Sbjct: 137 VR 138
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/134 (21%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Frame = +3
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-----VTSV 335
++ +GH V+SV+ G +L S S D T ++W+ + D V +
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKL-ASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 336 LFNDT-AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNT 512
++ ++ + ++ D +++WD R+ + + +++ + + ++ DG ++ + D+
Sbjct: 73 CWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENIN-ITYKPDGTHVAVGNRDDE 131
Query: 513 LRIWDVRPFAPTER 554
L I DVR F P R
Sbjct: 132 LTILDVRKFKPLHR 145
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 420 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHNFEK 596
S + +GH V ++ + +G L S S+D T RIW++ P ++ + GH + ++
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQ 71
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/119 (21%), Positives = 48/119 (40%)
Frame = +3
Query: 24 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVN 203
Y + + + HT + P G + G+ D+ V++WD+ ++ V
Sbjct: 178 YPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVR 237
Query: 204 SVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVD 380
++S G E + SAS+D I + + + V + SV +N + +G D
Sbjct: 238 TISFNYSG-EYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDD 295
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 56.0 bits (129), Expect = 2e-08
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL----KGHANFVN----- 203
++ H G+I + FS DG +L + D + +W V R +L K +N
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLLA 418
Query: 204 -------SVSGARRGPELLV--SASDDNTI--KLWDARKRNPVASFDSSYPVTSVLFNDT 350
S+S RRG S S DN + + PV SF L
Sbjct: 419 NGSPEPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWSK 478
Query: 351 AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRIWD 527
++ +LSS +D +++WD+ +++ LK+ H+D VT + + D Y +S S+D +RIW
Sbjct: 479 SQHLLSSSMDKTVRLWDL-SSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWS 537
Query: 528 V 530
+
Sbjct: 538 I 538
Score = 44.4 bits (100), Expect = 6e-05
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Frame = +3
Query: 21 VYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF 197
V+G E V GH ++ L +S HL + + D TV +WD+ + T + K+ H+++
Sbjct: 453 VFGLSEKPVCSFVGHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSSKTCL-KVFSHSDY 510
Query: 198 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV 377
V + +S S D +++W V D VT+ + + L
Sbjct: 511 VTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQGALVGSY 570
Query: 378 DNVIKMWDIRNNQI---------SLKIKGHTDTVTGLS-LSWDGAYLLSNSMDNTLRIWD 527
+++ +N++ + K K H +TG ++ + +L S D+ R+ D
Sbjct: 571 KGTCCLYNTHDNKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRVVD 630
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 420 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
S +I+ H ++ + S DG YL S D ++IW V
Sbjct: 356 SQEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKV 392
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 56.0 bits (129), Expect = 2e-08
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Frame = +3
Query: 6 ILIWNVYGQCEN-----VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI 170
IL+W E+ + ++GH+G + CF+ G LY+G+ D T+ +WD+ T I
Sbjct: 234 ILVWKATTDSESDPFKYLTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCI 291
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-------DSSYPVT 329
LK H V S+ + L+S+S D TIK+W A N + SS
Sbjct: 292 MTLKQHTGTVTSL---LCWDKCLISSSLDGTIKVW-AYSENGILKVVQTRRQEQSSVHAL 347
Query: 330 SVLFNDTAEKILSSGVDN-VIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD 506
S + + A+ I+ N + ++D+ + Q ++ T T+ L++ G L S
Sbjct: 348 SGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMFS-THTIATLTIGPQG-LLFSGDES 405
Query: 507 NTLRIW 524
LR+W
Sbjct: 406 GNLRVW 411
Score = 41.9 bits (94), Expect = 3e-04
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Frame = +3
Query: 15 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN 194
W+ + V ++GH + + L++ + D T+ VWD +G + + A
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAE 174
Query: 195 FVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG 374
+ +S GP + + N IK ++ + + ++ V V A +L +G
Sbjct: 175 AGSLIS---EGPWVFLGL--PNAIKAFNVQTSQDL-HLQAAGVVGQVNAMTIANGMLFAG 228
Query: 375 VDN-VIKMWDIRNNQIS------LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ I +W + S ++GH+ VT ++ G L S S+D T+++WD+
Sbjct: 229 TSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIKMWDLN 286
Query: 534 PFAPTERCVKLMSGH 578
T +C+ + H
Sbjct: 287 ----TLQCIMTLKQH 297
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 56.0 bits (129), Expect = 2e-08
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
++ H GA+ + FS D +L +G D + VW+V + +G ++ G
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSSGN 459
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFD---------SSYPVTSV---------LFNDTAE 356
E+ V K R+ N + + S PV S+ L ++
Sbjct: 460 EITVVEKKKKG-KGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWSKSQ 518
Query: 357 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRIWDVR 533
+LSS +D +++WDI + LK+ H D VT + S D Y LS S+D +RIW ++
Sbjct: 519 LLLSSSMDKTVRLWDI-ETKTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQ 577
Score = 37.5 bits (83), Expect = 0.007
Identities = 44/205 (21%), Positives = 90/205 (43%), Gaps = 12/205 (5%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W++ + + + + H + + FSP D ++ +G+ D + +W + ++
Sbjct: 529 VRLWDI--ETKTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRHVVEWSD 586
Query: 183 GH-----ANFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVL 338
H A + GA G + A D KL + + ++ S +TS
Sbjct: 587 LHEMVTAACYTPDGQGALIGSHKGICRAYDTEDCKLSQTNQIDVQSNKKSQAKRKITSFQ 646
Query: 339 FNDT-AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW--DGAYLLSNSMDN 509
F+ ++L + D+ I++ D +++ K KG +T + LS S+ DG Y++ S D+
Sbjct: 647 FSPVNPSEVLVTSADSRIRILD--GSEVIHKFKGFRNTCSQLSASYSQDGKYIICASEDS 704
Query: 510 TLRIWDVRPFAPTERCVKLMSGHQH 584
+ +W F T + S H+H
Sbjct: 705 QVYLWK-NDFHRTRSTLTTQS-HEH 727
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H A+ L + + LY+ + D T+ VW + ++ + H + VNSV ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA--IV 262
Query: 240 VSASDDNTIKLWDARKRNPVASF-------DSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
S S D T+K W ++ VT++ + + D ++ W
Sbjct: 263 FSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFW 322
Query: 399 DIRNNQISLK--IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMS 572
+ R Q++ +KGH V L L G+ + S S D T+ +W + C+ +++
Sbjct: 323 E-REKQLNYGGILKGHKLAV--LCLEVAGSLVFSGSADKTICVW--KRDGNIHTCLSVLT 377
Query: 573 GH 578
GH
Sbjct: 378 GH 379
Score = 46.4 bits (105), Expect = 2e-05
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 1/169 (0%)
Frame = +3
Query: 21 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIKKLKGHANF 197
V+ + K ++G + + S G ++TG D + VW V P + K G
Sbjct: 120 VWKNLKEFSAFKCNSGLVKAIVIS--GEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPT 177
Query: 198 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV 377
+ + A P V T LW + D+ V+ + ND + S+
Sbjct: 178 LKDIFKASLKPRNYVEVKKHRT-ALW-------IKHADA---VSCLSLNDEQGLLYSASW 226
Query: 378 DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
D IK+W I +++ I H D V + +S A + S S D T++ W
Sbjct: 227 DRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGSADGTVKAW 274
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 56.0 bits (129), Expect = 2e-08
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
+NV+ ++ H A+ L + D LY+G+ D T+ VW + ++ ++ H + VN+V
Sbjct: 237 KNVLKIR-HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVS 295
Query: 216 ARRGPELLVSASDDNTIKLW----DARKRNPV---ASFDSSYPVTSVLFNDTAEKILSSG 374
+L+ + S D T+K+W ++ V VT++ N T +
Sbjct: 296 G--FDDLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGS 353
Query: 375 VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTER 554
D + W+ R ++ K H + L L+ G+ LLS D + +W R +
Sbjct: 354 SDGTVNFWE-RQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWK-RNGDGSHT 411
Query: 555 CVKLMSGHQ 581
C+ ++ H+
Sbjct: 412 CLSVLMDHE 420
Score = 37.1 bits (82), Expect = 0.009
Identities = 35/157 (22%), Positives = 69/157 (43%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
K +G + + + D + ++TG D + VW G+ KK + V S+ +
Sbjct: 169 KSTSGFVKAIVVTRD-NRVFTGHQDGKIRVW---RGS--KKNPEKYSRVGSLPTLKEF-- 220
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 413
L S + N +++ R+R V V+ + N+ + S D +K+W + ++
Sbjct: 221 LTKSVNPRNYVEV---RRRKNVLKIRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDS 277
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ I+ H D V + +D + + S D TL++W
Sbjct: 278 KCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVW 313
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/79 (35%), Positives = 40/79 (50%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
K H+ + L S DG +L TG D V +WDV T ++ GH N V+ + R G
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLC-FRYGTS 277
Query: 234 LLVSASDDNTIKLWDARKR 290
L S S D T+K+W+ +
Sbjct: 278 ELYSGSFDRTVKVWNVEDK 296
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/161 (23%), Positives = 71/161 (44%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
V+ H +++ + S D S ++ + D T+ WDV +G K +
Sbjct: 156 VIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWP-------------S 202
Query: 228 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 407
E+L S + +KL + R +N S ++ + + + GVD + +WD+R
Sbjct: 203 DEILKS----HGMKLREPRNKN------HSRESLALAVSSDGRYLATGGVDRHVHIWDVR 252
Query: 408 NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ GH +TV+ L + + L S S D T+++W+V
Sbjct: 253 TREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNV 293
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
IW+V + E+V GH + LCF S LY+G+ D TV VW+V I + GH
Sbjct: 248 IWDVRTR-EHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQ 306
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 371
+ ++ R+ E ++ D T+ + + + + S F E + S
Sbjct: 307 GEILAIDALRK--ERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCCFISDNEYL--S 362
Query: 372 GVDN-VIKMWD-IRNNQISLKIKGHTDTVTGLS 464
G DN + +W ++ + + H D G++
Sbjct: 363 GSDNGTVALWGMLKKKPVFVFKNAHQDIPDGIT 395
Score = 35.9 bits (79), Expect = 0.022
Identities = 36/127 (28%), Positives = 58/127 (45%)
Frame = +3
Query: 204 SVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDN 383
SV R + V+ SDD++ + + A K + +D S T + E + S G+
Sbjct: 155 SVIVKHRRSVVSVALSDDDS-RGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGM-- 211
Query: 384 VIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVK 563
K+ + RN K H+ L++S DG YL + +D + IWDVR T V+
Sbjct: 212 --KLREPRN-------KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVR----TREHVQ 258
Query: 564 LMSGHQH 584
GH++
Sbjct: 259 AFPGHRN 265
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 55.2 bits (127), Expect = 3e-08
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTG-TRIKKLKGHANFVNSVSGARRGP 230
GHT ++ L +SP +++ + D +VAVWD+ G + K H VN +S R
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLAS 326
Query: 231 ELLVSASDDNTIKLWDARKRN----PVASFD-SSYPVTSVLFN-DTAEKILSSGVDNVIK 392
+L S SDD T + D R VA F+ +P+TS+ ++ A + + DN +
Sbjct: 327 CMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLT 386
Query: 393 MWDI 404
+WD+
Sbjct: 387 IWDL 390
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 348 TAEKILSSGVDNVIKMWDIRNNQIS---LKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTL 515
TA ++LS ++I +W+ + + + GHT +V L S + S S+D ++
Sbjct: 235 TAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSV 294
Query: 516 RIWDVR 533
+WD+R
Sbjct: 295 AVWDIR 300
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 55.2 bits (127), Expect = 3e-08
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
+ V +GH AI + + +L+ A D + +WD T ++K H VN +S
Sbjct: 210 MFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFN 269
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVI 389
+L +AS D+T+ L+D RK N SS+ V V ++ E +L SSG D +
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRL 329
Query: 390 KMWDI 404
+WD+
Sbjct: 330 MVWDL 334
Score = 41.9 bits (94), Expect = 3e-04
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Frame = +3
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSYP-----VTS 332
+L GH +S + L+S S D I LWD A ++ V + Y +
Sbjct: 163 RLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIAD 222
Query: 333 VLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSN-SMD 506
V ++ E + S+G D + +WD R NQ+ ++K H V LS + ++L+ S D
Sbjct: 223 VSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSD 282
Query: 507 NTLRIWDVRPF-APTERCVKLMSGHQ 581
+T+ ++D+R AP + +MS H+
Sbjct: 283 STVALFDLRKLNAP----LHVMSSHE 304
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 54.8 bits (126), Expect = 4e-08
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGARRGP 230
+T A+ ++ +SPDG L + + V ++ G ++ ++ HA VN ++ ++
Sbjct: 418 YTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQ 477
Query: 231 EL-LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMW 398
+L +V+ +D TIK+WDA N + +F+ PV SV + + I S+ VD IK W
Sbjct: 478 QLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Query: 399 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS 494
N + + T ++ DG L S
Sbjct: 538 LYDNMGSRVDYDAPGRSCTSMAYCADGTRLFS 569
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +3
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYPV-TSVLFNDTAEKILSSGVDNV-IKMWDIRNN 413
V ++ I L++ + +F + P TS+ F+ I++ G+D+ I+++++R +
Sbjct: 860 VMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVD 919
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF-APTERCVKLMSGHQHN 587
++ K+KGH VTGL+ S L+S+ D+ L +W + + + +++ SGH N
Sbjct: 920 EVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPN 978
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV- 209
N + + H G + L FS L T D T+ VWD TG ++ +GH V SV
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Query: 210 SGARRGPELLVSASDDNTIKLW 275
+ + + S + D IK W
Sbjct: 516 PHQKENIQFIFSTAVDGKIKAW 537
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 69 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 245
A L F P D + + G D+++ +++V KLKGH V ++ + +LVS
Sbjct: 888 AATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFS-NVLNVLVS 946
Query: 246 ASDDNTIKLW 275
+ D+ + +W
Sbjct: 947 SGADSQLCVW 956
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 54.8 bits (126), Expect = 4e-08
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGARRGP 230
+T A+ ++ +SPDG L + + V ++ G ++ ++ HA VN ++ ++
Sbjct: 418 YTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQ 477
Query: 231 EL-LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMW 398
+L +V+ +D TIK+WDA N + +F+ PV SV + + I S+ VD IK W
Sbjct: 478 QLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Query: 399 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS 494
N + + T ++ DG L S
Sbjct: 538 LYDNMGSRVDYDAPGRSCTSMAYCADGTRLFS 569
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +3
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYPV-TSVLFNDTAEKILSSGVDNV-IKMWDIRNN 413
V ++ I L++ + +F + P TS+ F+ I++ G+D+ I+++++R +
Sbjct: 860 VMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVD 919
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF-APTERCVKLMSGHQHN 587
++ K+KGH VTGL+ S L+S+ D+ L +W + + + +++ SGH N
Sbjct: 920 EVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPN 978
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV- 209
N + + H G + L FS L T D T+ VWD TG ++ +GH V SV
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Query: 210 SGARRGPELLVSASDDNTIKLW 275
+ + + S + D IK W
Sbjct: 516 PHQKENIQFIFSTAVDGKIKAW 537
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 69 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 245
A L F P D + + G D+++ +++V KLKGH V ++ + +LVS
Sbjct: 888 AATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFS-NVLNVLVS 946
Query: 246 ASDDNTIKLW 275
+ D+ + +W
Sbjct: 947 SGADSQLCVW 956
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 54.4 bits (125), Expect = 6e-08
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG--HANFVNSVSGARRG 227
KGH ++ LC SP +G+ D +V +WD+ R+ +G H +V+ ++G
Sbjct: 111 KGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL----RVNACQGILHLRGRPAVAYDQQG 166
Query: 228 PELLVSASDDNTIKLWDAR--KRNPVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIK 392
+ A + +KL+D+R + P +F + V + F++ + +L + +N I
Sbjct: 167 LVFAI-AMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIY 225
Query: 393 MWDIRNNQ--ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ D + ++ T + + DG Y+LS S D TL W++
Sbjct: 226 VLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGDGTLHAWNI 273
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Frame = +3
Query: 198 VNSVSGARRGPELLVSASDDNTIKLWD-ARKRNPVASFDSSYPVTSVLFNDTAEKILSSG 374
++SV G R +LLV++S+D++++L+D A + ++ + V F ++ S
Sbjct: 27 IHSV-GFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPSSLICSS 85
Query: 375 VDNV------IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
N+ ++ + +N+I KGH D V L +S +S S+D ++R+WD+R
Sbjct: 86 RYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLR 144
Score = 33.9 bits (74), Expect = 0.087
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +3
Query: 66 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 245
G ++ F+PDG ++ +G+ D T+ W++ + + + + + V+ + A R + V+
Sbjct: 245 GTPIEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPR-RAMFVA 303
Query: 246 AS 251
AS
Sbjct: 304 AS 305
Score = 31.1 bits (67), Expect = 0.62
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
+ ++ G T + + FS DG + T+N + V D G + + +
Sbjct: 192 DTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEAT 251
Query: 219 -RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 338
+ ++S S D T+ W+ + VA ++++ V S L
Sbjct: 252 FTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCL 292
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 54.0 bits (124), Expect = 8e-08
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPEL 236
H A+ L S DG+ LY+ + D T+ +W ++ H + +N+V+ + G
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-- 221
Query: 237 LVSASDDNTIKLW----------DARKRNPVASF-DSSYPVTSVLFNDTAEKIL-SSGVD 380
+ + S D IK+W RK + VA + + + ++ + T +L S G D
Sbjct: 222 IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSD 281
Query: 381 NVIKMW---DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTE 551
I +W D + + ++GHT++V L++ D L S S D T+R+W + A
Sbjct: 282 GSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSD--ILCSGSADKTVRLW--KCSAKDY 337
Query: 552 RCVKLMSGH 578
C+ ++ GH
Sbjct: 338 SCLAMLEGH 346
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Frame = +3
Query: 99 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASD-------D 257
G LYTG+ D V +W+ T + + + + + G + LV +D D
Sbjct: 48 GKRLYTGSNDGVVRLWNANTLETLAEASSNGDVITGERGGGGAVKSLVILADKLFTAHQD 107
Query: 258 NTIKLWDARK--RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKI 431
+ I++W V + T +D K L N + +IR ++ + +
Sbjct: 108 HKIRVWKINDVVEEDVGGKKYMHLATMPTISDRFAKCLMP--KNQV---EIRRHKKASWV 162
Query: 432 KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
H D V+GL+LS DG L S S D TL+IW F
Sbjct: 163 H-HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDF 197
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFS-PDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSV 209
V ++ H I L S +GS L++G +D ++ VW+ G I L+GH V +
Sbjct: 252 VAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCL 311
Query: 210 SGARRGPELLVSASDDNTIKLW--DARKRNPVASFDSSY-PVTSVL--FNDTAEK----- 359
+ ++L S S D T++LW A+ + +A + PV + F D+ +
Sbjct: 312 AVVS---DILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASY 368
Query: 360 -ILSSGVDNVIKMWDI 404
I S G+D+ +K+W +
Sbjct: 369 HIYSGGLDSQVKVWQV 384
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 54.0 bits (124), Expect = 8e-08
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
HT +++ L ++ + ++ A+ D V VWDV TGT ++ H V +V+ PE+
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 237 LVSASDDNTIKLWDARKRNPVA-SFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRN 410
L+S S D T+ + D R+ + + V S+ ++ E + S D +K +DIR
Sbjct: 324 LLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVKGFDIRA 383
Query: 411 NQI--------SLKIKGHTDTVTGLSLSWDGA---YLLSNSMDNTLRIWDVRPFAPT 548
Q + I+ H S+S++ + L + SMD ++++WD+ P+
Sbjct: 384 AQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPS 440
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 53.6 bits (123), Expect = 1e-07
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
+GH ++ L +S HL + + D TV +W++ + T +K H+++V +
Sbjct: 510 QGHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDR 567
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 413
+S S D +++W R V +D VTS + + +L +M+ +N
Sbjct: 568 YFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYSASDN 627
Query: 414 ------QISL---KIKGHTDTVTGLS-LSWDGAYLLSNSMDNTLRIWD 527
QI+L K K H +TG + + +L S D+ +R+ D
Sbjct: 628 KLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVD 675
Score = 51.2 bits (117), Expect = 5e-07
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-----------KGHANF 197
++ H G+I + FS DG +L + D + +W V + +L +
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATNGSPE 468
Query: 198 VNSVSGARRGPELLV--SASDDNTI---KLWDARKRNPVASFDSSYPVTSVLFNDTAEKI 362
++S RRG + S S +N L+ ++ P SF L ++ +
Sbjct: 469 PTTMSPRRRGRTSISRKSLSLENIFVPDSLFGLSEK-PFCSFQGHVDDVLDLAWSKSQHL 527
Query: 363 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRIWDV 530
LSS +D +++W++ ++Q LK+ H+D VT + + D Y +S S+D +R+W +
Sbjct: 528 LSSSMDKTVRLWNL-SSQTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSI 583
Score = 37.1 bits (82), Expect = 0.009
Identities = 39/185 (21%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +WN+ Q + + H+ + + F+P D + +G+ D V VW +P +
Sbjct: 536 VRLWNLSSQ--TCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYD 593
Query: 183 GHANFVNS---------VSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV 335
H ++ + G+ +G + SASD+ + +N
Sbjct: 594 LHEMVTSACYTPDGQGVLVGSYKGSCRMYSASDNKLQQKSQINLQNKKKKAHQKKITGFQ 653
Query: 336 LFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW--DGAYLLSNSMDN 509
++ ++L + D+ I++ D + K+KG +T + +S S DG Y++S S D+
Sbjct: 654 FVPGSSSEVLVTSSDSRIRVVD--GTDLVNKLKGFRNTSSQISASITADGKYVVSASEDS 711
Query: 510 TLRIW 524
+ IW
Sbjct: 712 HVYIW 716
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 432 KGHTDTVTGLSLSWDGA-YLLSNSMDNTLRIWDVRPFAPTERCVKLMS 572
+GH D V L L+W + +LLS+SMD T+R+W++ ++ C+K+ S
Sbjct: 510 QGHVDDV--LDLAWSKSQHLLSSSMDKTVRLWNL----SSQTCLKVFS 551
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+I+ H ++ + S DG YL S D + IW V
Sbjct: 408 EIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQV 442
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 53.2 bits (122), Expect = 1e-07
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 24/184 (13%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-----HANFVNSVSG 215
++ H G I + FSPD L + D + VW+V + +G H + S
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPIHPSMSGSTDK 466
Query: 216 ARRGPELLVSASDDNTIKLWDARKRN------------------PVASFDSSYPVTSVLF 341
+ G VS K ++K N P+ SF L
Sbjct: 467 SSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLDDVLDLS 526
Query: 342 NDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLR 518
++ +LSS +D +++WDI Q LK+ H D VT + + D Y +S S+D +R
Sbjct: 527 WSRSQLLLSSSMDKTVRLWDI-ETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 519 IWDV 530
IW++
Sbjct: 586 IWNI 589
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 53.2 bits (122), Expect = 1e-07
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%)
Frame = +3
Query: 60 HTGAIMQLCFS-PDGSHLYTGATDNTVAVWDVPTGTR------IKKLK-----------G 185
H G++ L +G +L +GA D + AV+DV T I K K G
Sbjct: 42 HRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHENG 101
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTA--EK 359
H ++S + ++ S D+ +K+WD V F V + A
Sbjct: 102 HKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHT 161
Query: 360 ILSSGVDNV-IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLL-SNSMDNTLRIWDVR 533
++++G D+V +++ DI + S + GH D V + S ++L + D +R WD+R
Sbjct: 162 LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIR 221
Score = 41.1 bits (92), Expect = 6e-04
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = +3
Query: 57 GHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN-FVNSVSGARRGP 230
GH AI + P D TG+ D+ V VWD T + K + ++S
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSH 160
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKIL-SSGVDNVIKMWDI 404
L+ + +DD ++L D + V SV ++ ++E +L + G D I+ WDI
Sbjct: 161 TLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 405 R 407
R
Sbjct: 221 R 221
Score = 35.9 bits (79), Expect = 0.022
Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 3/163 (1%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
+ GH +M + +S LYTG D + WD+ + L + +
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDNSQTQLGVRPPILKR 245
Query: 228 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 407
P + L D +N + + S + + + ++EK V+ + I
Sbjct: 246 PAVSSKFFSAAKSSLGD---QNWLKTLQSKHTGSQSVKGSSSEK---PSVEKS-RQKRIH 298
Query: 408 NNQISL--KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+S + H VTGL + DG YLLS + +R+WD+
Sbjct: 299 PGMLSTLDRATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDI 341
Score = 34.3 bits (75), Expect = 0.066
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 117 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 296
G D V + D+ +G L GH + V SV + +L + D I+ WD R+
Sbjct: 166 GTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGC 225
Query: 297 VASFDSS 317
D+S
Sbjct: 226 FRVLDNS 232
Score = 33.1 bits (72), Expect = 0.15
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPE 233
H G + L + DG +L + + + + +WD+ +G T + G ++
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDTSDDP 370
Query: 234 LLVSASDDNTIK---LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
LV T+K +W R + S V + FN +++ +SG D I +W
Sbjct: 371 ALVFVPCMKTVKGFGMWSGRTTLMLRGHYES--VNTCCFNSNDQELYTSGADRQIIVW 426
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 164
++++GH ++ CF+ + LYT D + VW P G+
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS-PGGS 431
Score = 31.9 bits (69), Expect = 0.35
Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFN 344
+ + H V + G LL SA + I+LWD RN + +F++ T
Sbjct: 305 LDRATAHYGVVTGLKATNDGMYLL-SAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQ 363
Query: 345 -DTAEK--ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 515
DT++ ++ +K + + + + +L ++GH ++V + + L ++ D +
Sbjct: 364 LDTSDDPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQI 423
Query: 516 RIW 524
+W
Sbjct: 424 IVW 426
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 52.8 bits (121), Expect = 2e-07
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKKLKG--HANF-VNSVSGA 218
+ GHT A+ + +S HL A D V VW+V + + KK++ H N V V +
Sbjct: 156 LTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDK-KKVRAFLHHNAPVKDVKWS 214
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN-DTAEKILSSGVDNVIKM 395
++G LL S D T +L+D + SF V V F+ D LS G +++
Sbjct: 215 KQGLSLL-SCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRL 273
Query: 396 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNS-------MDNTLRIWDVRPFAP 545
WDIR N+ + + + G +S+S +N + +WD+ P
Sbjct: 274 WDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDISREVP 330
Score = 36.3 bits (80), Expect = 0.016
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 54 KGH--TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
+GH G ++ FSPDG L +G++D +V ++D + IKKLK + +VS
Sbjct: 381 EGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVL 440
Query: 228 PELLVSASDDNTIKLWD 278
P ++ + S + + +++
Sbjct: 441 PNVVAACSWNGQVSVFE 457
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGH 188
++++ + ++V+ GHT + F D + TG+TD ++ WD+ G R ++ +GH
Sbjct: 239 VYDIRRLVDPLIVLDGHTKTVTYARFM-DSHTIVTGSTDGSLKQWDIDNGRRVVRTYRGH 297
Query: 189 ANFVNSVS-GARRGPELLVSASDDNTIKLWDARKRNPV 299
N N V R L+VS S++N + ++D R PV
Sbjct: 298 VNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPV 335
Score = 41.5 bits (93), Expect = 4e-04
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 9/162 (5%)
Frame = +3
Query: 72 IMQLCFSPD--GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELL- 239
+ L + PD G + +G D V +DV + + H + SV L+
Sbjct: 124 LSSLKWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIG 183
Query: 240 VSASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIR 407
S SDD T+++WD R + + SV F+ ++ G D ++DIR
Sbjct: 184 ASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIR 243
Query: 408 NNQISL-KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
L + GHT TVT + D +++ S D +L+ WD+
Sbjct: 244 RLVDPLIVLDGHTKTVT-YARFMDSHTIVTGSTDGSLKQWDI 284
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 52.4 bits (120), Expect = 2e-07
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%)
Frame = +3
Query: 60 HTGAIMQLCFS-PDGSHLYTGATDNTVAVWDVPTGTR------IKKLK-----------G 185
H G++ L +G +L +GA D + AV+DV T I K K G
Sbjct: 42 HRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENG 101
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTA--EK 359
H ++S L ++ S D+ +K+WD V F V + A
Sbjct: 102 HKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHT 161
Query: 360 ILSSGVDNV-IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLL-SNSMDNTLRIWDVR 533
++++G ++V +++ DI + S + GH D V + S ++L + D +R WD+R
Sbjct: 162 LIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIR 221
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHAN-FVNSVSGARRGP 230
GH AI + P + L+ TG+ D+ + VWD T + K + ++S
Sbjct: 101 GHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSH 160
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKIL-SSGVDNVIKMWDI 404
L+ + ++D ++L D + V SV ++ ++E +L + G D I+ WDI
Sbjct: 161 TLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 405 R 407
R
Sbjct: 221 R 221
Score = 37.5 bits (83), Expect = 0.007
Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 9/169 (5%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVN-------- 203
+ GH +M + +S LYTG D + WD+ + L +
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQLGFRPPILKR 245
Query: 204 SVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDN 383
+ G++ S N +K +++ + SS SV + +K + G+ +
Sbjct: 246 TAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSSSAKASV--EKSRQKRIHPGMLS 303
Query: 384 VIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ + H VTGL + DG YLLS D+ +R+WD+
Sbjct: 304 TLD-----------RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDI 341
Score = 37.5 bits (83), Expect = 0.007
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPE 233
H GA+ L + DG +L + +D+ + +WD+ +G T + G +
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDP 370
Query: 234 LLVSASDDNTIK---LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
LV T+K +W R + S V + FN +++ +SG D I +W
Sbjct: 371 ALVFVPCMKTVKAFGMWSGRTTLMLRGHYES--VNTCCFNSNDQELYTSGSDRQILVW 426
Score = 35.9 bits (79), Expect = 0.022
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFN 344
+ + H V + G LL SA D+ I+LWD RN + +F++ T+
Sbjct: 305 LDRATAHYGAVTGLKATNDGMYLL-SAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQ 363
Query: 345 -DTAEK--ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 515
DT++ ++ +K + + + + +L ++GH ++V + + L ++ D +
Sbjct: 364 LDTSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQI 423
Query: 516 RIW 524
+W
Sbjct: 424 LVW 426
Score = 34.7 bits (76), Expect = 0.050
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 164
++++GH ++ CF+ + LYT +D + VW P GT
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS-PGGT 431
Score = 33.9 bits (74), Expect = 0.087
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +3
Query: 117 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 296
G D V + D+ +G L GH + V SV + +L + D I+ WD R+
Sbjct: 166 GTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGC 225
Query: 297 VASFDSS 317
D S
Sbjct: 226 FRVLDQS 232
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 52.0 bits (119), Expect = 3e-07
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 8/189 (4%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 215
+NV+ ++ H A+ L + + LY+G+ D T+ VW + ++ ++ H + +N+V
Sbjct: 241 KNVLKIR-HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTV-- 297
Query: 216 ARRGPELLVSASDDNTIKLWDARKRNPVAS-------FDSSYPVTSVLFNDTAEKILSSG 374
A +LL + S D T+K+W + VT++ N TA +
Sbjct: 298 AAGFDDLLFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGS 357
Query: 375 VDNVIKMWDIRNN-QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTE 551
D + W+ + ++GH V L L+ G+ +LS D + +W R +
Sbjct: 358 SDGTVNFWEGQKYLSHGGTLRGHRLAV--LCLAAAGSLVLSGGADKNICVWR-RNGDGSH 414
Query: 552 RCVKLMSGH 578
C+ ++ H
Sbjct: 415 SCLSVLMDH 423
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/157 (21%), Positives = 71/157 (45%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
K +G + + + D + ++TG D + VW G+ K+ G + + S+ +
Sbjct: 173 KSTSGLVKAIVITGD-NRIFTGHQDGKIRVW---RGS--KRRTGGYSRIGSLPTLKEF-- 224
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 413
L S + N +++ R+R V V+ + N+ + S D +K+W + ++
Sbjct: 225 LTKSVNPKNYVEV---RRRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDS 281
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ I+ H D + ++ +D L + S D TL++W
Sbjct: 282 KCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVW 317
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.0 bits (119), Expect = 3e-07
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
KGH G I+ L +S G +L + + D TV +W V ++ H NFV V+
Sbjct: 319 KGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 413
+S S D +++WD + V D VT+V + A+ + + + + I N
Sbjct: 377 YFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 414 QISL 425
Q+ +
Sbjct: 437 QLQM 440
Score = 44.8 bits (101), Expect = 5e-05
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-----IKKLKGHANF-VNSVS--- 212
H G+I+ + FSPDG ++ + D V VW + R + ++ F +N S
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQIE 276
Query: 213 -------GARRGPELLVSASDDNTIKLWD---ARKRNPVASFDSSYPVTSVLFNDTAEK- 359
+ L +SD + L + P+ F + +L +EK
Sbjct: 277 PLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGH--IGEILDLSWSEKG 334
Query: 360 -ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRIWDV 530
+LSS VD +++W + ++ L+ H + VT ++ + D Y +S S+D +RIWDV
Sbjct: 335 YLLSSSVDETVRLWRVGCDE-CLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Score = 35.5 bits (78), Expect = 0.029
Identities = 41/214 (19%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W V C+ + H + + F+P D ++ +G+ D V +WDV T R+
Sbjct: 345 VRLWRV--GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV-TRCRVVDYT 401
Query: 183 GHANFVNSVSGARRGPELLVSASD---------DNTIKL---WDARKRNPVASFDSSYPV 326
+ V +V ++ + +N +++ + + VAS S +
Sbjct: 402 DIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFENQLQMDQEINVHGKKKVASKRIS-GL 460
Query: 327 TSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD 506
+ + ++K++ + D+ I++ I + K+K + T S DG +++S S D
Sbjct: 461 QYLPSDSDSDKVMVTSADSQIRI--ICGEDVICKLKASSLRTTSASFISDGKHIISTSED 518
Query: 507 NTLRIWDV------RPFAPTERCVKLMSGH-QHN 587
+ + +W +P++ T + ++ G HN
Sbjct: 519 SYINVWSYSQLPSKKPYSETPKSIRSYEGFLSHN 552
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +3
Query: 417 ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
I + H ++ + S DG Y+ S D +R+W +
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.0 bits (119), Expect = 3e-07
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
KGH G I+ L +S G +L + + D TV +W V ++ H NFV V+
Sbjct: 319 KGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 413
+S S D +++WD + V D VT+V + A+ + + + + I N
Sbjct: 377 YFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 414 QISL 425
Q+ +
Sbjct: 437 QLQM 440
Score = 44.8 bits (101), Expect = 5e-05
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-----IKKLKGHANF-VNSVS--- 212
H G+I+ + FSPDG ++ + D V VW + R + ++ F +N S
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQIE 276
Query: 213 -------GARRGPELLVSASDDNTIKLWD---ARKRNPVASFDSSYPVTSVLFNDTAEK- 359
+ L +SD + L + P+ F + +L +EK
Sbjct: 277 PLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGH--IGEILDLSWSEKG 334
Query: 360 -ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRIWDV 530
+LSS VD +++W + ++ L+ H + VT ++ + D Y +S S+D +RIWDV
Sbjct: 335 YLLSSSVDETVRLWRVGCDE-CLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Score = 35.5 bits (78), Expect = 0.029
Identities = 41/214 (19%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
+ +W V C+ + H + + F+P D ++ +G+ D V +WDV T R+
Sbjct: 345 VRLWRV--GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV-TRCRVVDYT 401
Query: 183 GHANFVNSVSGARRGPELLVSASD---------DNTIKL---WDARKRNPVASFDSSYPV 326
+ V +V ++ + +N +++ + + VAS S +
Sbjct: 402 DIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFENQLQMDQEINVHGKKKVASKRIS-GL 460
Query: 327 TSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD 506
+ + ++K++ + D+ I++ I + K+K + T S DG +++S S D
Sbjct: 461 QYLPSDSDSDKVMVTSADSQIRI--ICGEDVICKLKASSLRTTSASFISDGKHIISTSED 518
Query: 507 NTLRIWDV------RPFAPTERCVKLMSGH-QHN 587
+ + +W +P++ T + ++ G HN
Sbjct: 519 SYINVWSYSQLPSKKPYSETPKSIRSYEGFLSHN 552
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +3
Query: 417 ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
I + H ++ + S DG Y+ S D +R+W +
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 51.6 bits (118), Expect = 4e-07
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H+G + CF G LY+G+ D T+ VWD+ T LK H + +V+ + L
Sbjct: 311 HSGEVT--CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQH---IGTVTSLLCWDKCL 365
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYPVTSV-----LFNDTAEKILSSGVDN-VIKMWD 401
+S+S D TIKLW + + + SV + + A+ I+ N + ++D
Sbjct: 366 ISSSLDGTIKLWACSENESLKVVQTRKQELSVHTLCGMHDAEAKPIMFCSYQNGAVGIFD 425
Query: 402 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ + + K+ T T+ L++ G L S LR+W +
Sbjct: 426 LPSFEERGKMFS-TQTICTLTIG-PGGLLFSGDKSGNLRVWSL 466
Score = 37.9 bits (84), Expect = 0.005
Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 7/179 (3%)
Frame = +3
Query: 15 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN 194
W+ + V ++GH I + L++ + D T+ +WD +G ++ + A
Sbjct: 171 WSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAE 230
Query: 195 FVNSVSGARRGPELLVSASDD----NTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKI 362
+ +S GP + + + N D V + +LF T
Sbjct: 231 AGSLIS---EGPWVFLGLPNAVKAFNVQNSKDVHLEGVVGQVHAMTAANGMLFAGT---- 283
Query: 363 LSSGVDNVIKMWDIRNNQIS--LKIKG-HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
SSG V K D ++ ++G H+ VT + G L S S+D T+++WD+
Sbjct: 284 -SSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVG--GEVLYSGSVDKTIKVWDL 339
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH--ANFVNSVSG 215
V V++GH ++M + F P S L+TG+ D + +WD + H AN V +V+
Sbjct: 10 VAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAA 69
Query: 216 AR-RGPELLVSASDDNTIKLWD 278
+ G + ++S D T+K WD
Sbjct: 70 SPWLGEDKIISQGRDGTVKCWD 91
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 96 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 275
DG T D+ + V++ G + LK H N+VS + EL+ SAS+D T+ LW
Sbjct: 319 DGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSP-DCELMASASEDATVALW 377
Score = 31.5 bits (68), Expect = 0.47
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIRNNQISL-KIKGHTDTVTGLSL--SWDGAYLLSNSMDNTLRIWDV 530
+L+ D I +WDIRN +I L +K H++ V LS+ S DG +S D+ + ++++
Sbjct: 234 VLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGG--ISGGADDKIVMYNL 291
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 429 IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
++GH +V +S + L + S D LRIWD
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 146
+I ++N Y + + ++K H + +SPD + + + D TVA+W
Sbjct: 331 RIRVYN-YRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 51.2 bits (117), Expect = 5e-07
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Frame = +3
Query: 60 HTGAIMQLC-FSPDGSHLYTGATDNTVAVW----DVPTGTRIKKLKGH--ANFVNSVSGA 218
H G +Q S DG + TGA D V+VW D P G+R +L+ A+ +
Sbjct: 3272 HEGNQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLR 3331
Query: 219 RRGPELLV-SASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIK 392
P +++ S+SDD T+ +WD + V + S PVT V ND +I+++ +V+
Sbjct: 3332 VSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIVTA-AGSVLA 3390
Query: 393 MWDIRNNQISLKIKGH--TD---TVTGLSLS-W-DGAYLLSNSMDNTLRIWDVRPFAPTE 551
+W I + +S+ TD +V G + S W + + ++ L++W +
Sbjct: 3391 VWSINGDCLSVVNTSQLPTDLIVSVAGSTFSDWLETTWYVTGHQSGALKVWRMVHCTDPI 3450
Query: 552 RCVKLMSGHQHNFE 593
+C M Q E
Sbjct: 3451 KCCYRMQKQQSETE 3464
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +3
Query: 165 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLF 341
R +K++ H +V G + +V+AS D +I D VA ++++ + L
Sbjct: 43 RERKVRAHKESCRAVRFIDDG-QRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLI 101
Query: 342 NDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 521
N T I S +K+WD R S + H D ++G++ + D L+ S D TL +
Sbjct: 102 NVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSV 161
Query: 522 WDVR 533
++R
Sbjct: 162 CNLR 165
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 51.2 bits (117), Expect = 5e-07
Identities = 31/104 (29%), Positives = 52/104 (50%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
FS DG L + D+TV + D TG +K L GH V R E++ S S D+ +
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 267 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
+LW+A+ + + D P+ S+ F+ E +L+ + + +W
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFHAGGE-LLAVASGHKLHIW 213
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 51.2 bits (117), Expect = 5e-07
Identities = 31/104 (29%), Positives = 52/104 (50%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
FS DG L + D+TV + D TG +K L GH V R E++ S S D+ +
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 267 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
+LW+A+ + + D P+ S+ F+ E +L+ + + +W
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFHAGGE-LLAVASGHKLHIW 213
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 50.8 bits (116), Expect = 7e-07
Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 21/182 (11%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNT-VAVWDVPTGTRIKKLKGHANFVNSVSGARR 224
V +GH I + + +++ A D+ + +WD+ T ++K H +N +S
Sbjct: 213 VYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPF 272
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKM 395
+L +AS D+T+ L+D RK S + V V ++ E +L SSG D + +
Sbjct: 273 NEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMV 332
Query: 396 WDIR---NNQISLKIK-------------GHTDTVTGLSLSWDGAYLLSN-SMDNTLRIW 524
WDI + Q+ +++ GH ++ + + D +++S+ + DN+L++W
Sbjct: 333 WDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVW 392
Query: 525 DV 530
+
Sbjct: 393 QM 394
Score = 44.0 bits (99), Expect = 8e-05
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Frame = +3
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA------RKRNPVASFDSSYPVTS- 332
+L GH ++ + L+S S D I LWD + NP+ ++ +
Sbjct: 164 RLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIED 223
Query: 333 VLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSN-SMD 506
V ++ E I S+G D + +WD+R NQ+ ++K H + LS + ++L+ S D
Sbjct: 224 VAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSD 283
Query: 507 NTLRIWDVR 533
+T+ ++D+R
Sbjct: 284 STVALFDLR 292
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 50.8 bits (116), Expect = 7e-07
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Frame = +3
Query: 105 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 284
++ G + V DV + T K L GH + VN + P+L+++AS D +++LW+
Sbjct: 100 YVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVE 159
Query: 285 KRNPVASFDSS----YPVTSVLFNDT-AEKILSSGVDNVIKMWDIR 407
+ F + Y V SV F+ + + S G+D IK+W ++
Sbjct: 160 TGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMK 205
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMK-GHT---GAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 158
++ +W++ C V++ K H I Q S DGS + D T+ WDV T
Sbjct: 314 KVYVWDLKS-CPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGTIWRWDVIT 368
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 50.4 bits (115), Expect = 9e-07
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP---------TGTR--IKKLKGHANFVNS 206
H + FSPDG TG D ++ +++VP T R I+ HA +N
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 89
Query: 207 VSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVLFNDTAEKILSSGV 377
+ R +L+S++ DN IK +D K + F ++ V S+ F+ + E +L +G
Sbjct: 90 LDFHPRS-TILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLL-AGT 147
Query: 378 DNVI-KMWDIRNNQISLKI----KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
D+ I ++D+ Q L G + + + S G+ ++ S D +R++D
Sbjct: 148 DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFD 202
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = +3
Query: 63 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK----GHANFVNSVSGARRGP 230
T + + F P G L G ++DV T G + +N V + G
Sbjct: 128 THNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTG- 186
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSY---PVTSVLFNDTAEKILSSGVDNVIKMWD 401
+ ++AS D I+L+D V S +++ VTS +F +LSSG D+ +K+W+
Sbjct: 187 SIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWE 246
Query: 402 IRNNQI 419
I + ++
Sbjct: 247 IGSGRM 252
Score = 40.7 bits (91), Expect = 8e-04
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP--TGTRIKKLKGHANFVNSVSGARRGPE 233
H I L F P + L + A DN + +D T R K+ + V S+S G E
Sbjct: 83 HAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSG-E 141
Query: 234 LLVSASDDNTIKLWDARKRN---PVASFDS--SYPVTSVLFNDTAEKILSSGVDNVIKMW 398
L++ +D L+D P DS S + V ++ T +++ D I+++
Sbjct: 142 FLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLF 201
Query: 399 DIRNNQISLKI-KGHTDT-VTGLSLSWDGAYLLSNSMDNTLRIWDV 530
D + + I H + VT + D ++LS+ D+T+++W++
Sbjct: 202 DGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEI 247
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVSASD-DN 260
F+ D + + D+TV +W++ +G +K+ G + S + E ++S + N
Sbjct: 226 FTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASN 285
Query: 261 TIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKI-LSSGVDNVIKMW 398
+ WDAR + VA + S++ + + E + ++ G+D I+ W
Sbjct: 286 EVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 333
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 50.4 bits (115), Expect = 9e-07
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP---------TGTR--IKKLKGHANFVNS 206
H + FSPDG TG D ++ +++VP T R I+ HA +N
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 181
Query: 207 VSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVLFNDTAEKILSSGV 377
+ R +L+S++ DN IK +D K + F ++ V S+ F+ + E +L +G
Sbjct: 182 LDFHPRS-TILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLL-AGT 239
Query: 378 DNVI-KMWDIRNNQISLKI----KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
D+ I ++D+ Q L G + + + S G+ ++ S D +R++D
Sbjct: 240 DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFD 294
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = +3
Query: 63 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK----GHANFVNSVSGARRGP 230
T + + F P G L G ++DV T G + +N V + G
Sbjct: 220 THNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTG- 278
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSY---PVTSVLFNDTAEKILSSGVDNVIKMWD 401
+ ++AS D I+L+D V S +++ VTS +F +LSSG D+ +K+W+
Sbjct: 279 SIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWE 338
Query: 402 IRNNQI 419
I + ++
Sbjct: 339 IGSGRM 344
Score = 40.7 bits (91), Expect = 8e-04
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP--TGTRIKKLKGHANFVNSVSGARRGPE 233
H I L F P + L + A DN + +D T R K+ + V S+S G E
Sbjct: 175 HAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSG-E 233
Query: 234 LLVSASDDNTIKLWDARKRN---PVASFDS--SYPVTSVLFNDTAEKILSSGVDNVIKMW 398
L++ +D L+D P DS S + V ++ T +++ D I+++
Sbjct: 234 FLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLF 293
Query: 399 DIRNNQISLKI-KGHTDT-VTGLSLSWDGAYLLSNSMDNTLRIWDV 530
D + + I H + VT + D ++LS+ D+T+++W++
Sbjct: 294 DGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEI 339
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVSASD-DN 260
F+ D + + D+TV +W++ +G +K+ G + S + E ++S + N
Sbjct: 318 FTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASN 377
Query: 261 TIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKI-LSSGVDNVIKMW 398
+ WDAR + VA + S++ + + E + ++ G+D I+ W
Sbjct: 378 EVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 425
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 50.0 bits (114), Expect = 1e-06
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Frame = +3
Query: 12 IW-NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG-----TRIK 173
+W N E+V V++GH + + ++ GS L T D +V +W++ I
Sbjct: 74 VWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIA 133
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR----NPVASFDS-----SYPV 326
L GH+ V V ++L S S DNTIK+W + N V + S V
Sbjct: 134 VLTGHSEDVKMVLW-HPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTV 192
Query: 327 TSVLFNDTAEKILSSGVDNVIKMW 398
S+ FN +K+++ D +K+W
Sbjct: 193 WSISFNAAGDKMVTCSDDLAVKIW 216
Score = 48.0 bits (109), Expect = 5e-06
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Frame = +3
Query: 117 GATDNTVAVWD--VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR 290
G+ D VW+ + L+GH + V SVS G LL + D ++ +W+ +
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASG-SLLATCGRDKSVWIWEIQPE 124
Query: 291 NPVASFDS-------SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ--------ISL 425
FD+ S V VL++ T + + S DN IK+W + +S
Sbjct: 125 ED-DEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSE 183
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
GH+ TV +S + G +++ S D ++IW
Sbjct: 184 LNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIW 216
Score = 35.5 bits (78), Expect = 0.029
Identities = 31/141 (21%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Frame = +3
Query: 168 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND 347
++KL+GH + V +V+ ++ S S D T+++W+ +S S+ T L +
Sbjct: 13 VQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQ------SSLTRSW--TCKLGHR 64
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
G V + + + +S+ ++GH V +S + G+ L + D ++ IW+
Sbjct: 65 LGS---FDGNTCVWENFATDSESVSV-LRGHESEVKSVSWNASGSLLATCGRDKSVWIWE 120
Query: 528 VRPFAPTE-RCVKLMSGHQHN 587
++P E + +++GH +
Sbjct: 121 IQPEEDDEFDTIAVLTGHSED 141
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 50.0 bits (114), Expect = 1e-06
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Frame = +3
Query: 69 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 245
AI L P D LY G VWD+ G + + H +NS+ + P ++ +
Sbjct: 307 AIFSLSQRPNDEQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMAT 366
Query: 246 ASDDNTIKLWD-----ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
+S D T LWD A+K +++ + S V S F+ + + ++ +DN I + N
Sbjct: 367 SSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPSGLSLATTSLDNYIGVLSGAN 426
Query: 411 NQISLKIKGHTDTVTGLS-----LSWDGAYLLSNSMDNTLRI 521
+ + I H +T +S WD +Y+ ++ + +
Sbjct: 427 FENTCMIY-HNNTSRWISKFKAVWGWDDSYIYVGNLSKKIDV 467
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV-RP 536
I S+ +D I++WDI + + + GH V GL+ S DG L+S D T+R+W+V RP
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVPRP 131
Score = 49.2 bits (112), Expect = 2e-06
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
I +W++ + V GH GA+ L S DG+ L + TD TV +W+VP +
Sbjct: 81 IRLWDISSR-RTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVPRPSLEDSSIS 139
Query: 186 HANFV---------NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSV 335
NF+ N+ E + A+ + +W+ + PV SF + V SV
Sbjct: 140 SENFIEPSATYVWKNAFWAVDHQFEGDLFATAGAQLDIWNHNRSQPVQSFQWGTDSVISV 199
Query: 336 LFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD 476
FN +L +S D I ++D+R + + KI T T S++W+
Sbjct: 200 RFNPGEPNLLATSASDRSITIYDLRLSSAARKIIMMTKT---NSIAWN 244
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
V M GH + + +P+ +++ + D + +WD+ + + + GH V ++ +
Sbjct: 49 VGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTAS 108
Query: 219 RRGPELLVSASDDNTIKLWD 278
G +LVS D T++LW+
Sbjct: 109 TDG-NVLVSCGTDCTVRLWN 127
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
V K H A+M + FSP G TG+ D +V ++ G +++ H + V +
Sbjct: 274 VHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPY-NGGHSREIY-HTKRMQRVFCVKYS 331
Query: 228 PE--LLVSASDDNTIKLWDAR 284
+ ++S SDD ++LW A+
Sbjct: 332 CDATYVISGSDDTNLRLWKAK 352
Score = 35.9 bits (79), Expect = 0.022
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 356
+ GH + V+ ++ + + SAS D I+LWD R V F L T
Sbjct: 52 MDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDG 111
Query: 357 KIL-SSGVDNVIKMWDI 404
+L S G D +++W++
Sbjct: 112 NVLVSCGTDCTVRLWNV 128
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 48.4 bits (110), Expect = 4e-06
Identities = 47/160 (29%), Positives = 72/160 (45%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
+K H GAI+ + FS DG L + D V VW V KK + + +N + P
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV---VEDKKSRLRRDCLNEID-----P 268
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
+ ++ D + PV + T+ F T++ S+ V K++ I
Sbjct: 269 SCMY-------FEVNDLSQLKPVLVNEEKPKKTTESFRKTSD---SACVVFPPKVFRIME 318
Query: 411 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ + +GHT V +S S D YLLS SMD T+R+W V
Sbjct: 319 KPL-YEFRGHTGEVLDISWSKDN-YLLSASMDKTVRLWKV 356
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = +3
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTA 353
+ +GH V +S ++ L+SAS D T++LW + + F + VTSV FN
Sbjct: 323 EFRGHTGEVLDISWSK--DNYLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVN 380
Query: 354 EKILSSG-VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
E SG +D +++W+I + + D ++ + DG + S++ + R +++
Sbjct: 381 ENYFMSGSIDGKVRIWNISGCSV-VDWADLKDIISAVCYRPDGQGGIIGSLNGSCRFFNM 439
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 420 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
S IK H + + S DG +L S+ D +R+W V
Sbjct: 214 SQDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +3
Query: 63 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 218
T ++ + DG H+ + D+ V +W + KK++ F + S A
Sbjct: 503 TRSLTSASLTSDGKHIVSACEDSNVYIWSNDEESETKKIRSFERFSANASVA 554
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/75 (36%), Positives = 33/75 (44%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H AI + + S L T + D T+ VWDV L GH V S+ +LL
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 240 VSASDDNTIKLWDAR 284
VS S D LWD R
Sbjct: 187 VSGSRDGCFALWDLR 201
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 183 GHANFVNSVSGARRGPELLVSAS-DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK 359
GH + NS S + SA+ +NT K AR R+ +A +++ + + S + D+
Sbjct: 94 GHVSLFNSSS-----KKFASSATHQENTEK---ARFRDWIAHYNAIFDI-SWIKGDSC-- 142
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL-SLSWDGAYLLSNSMDNTLRIWDVR 533
+L++ D IK+WD+ N+ + + GHT TV + S + L+S S D +WD+R
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLR 201
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 263
SPDG ++ +G++D +W V P I LKGH V +V + + +ASDD T
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPI-ILKGHDFEVTAVDWSPSEIGKVATASDDFT 405
Query: 264 IKLWD 278
++LW+
Sbjct: 406 VRLWN 410
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +3
Query: 231 ELLVSASDDNTIKLWDARKR--NPVASFDSSYPVTSVLFNDTA-EKILSSGVDNVIKMWD 401
E ++S S D +W K +P+ + VT+V ++ + K+ ++ D +++W+
Sbjct: 351 EYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWN 410
Query: 402 IRNN 413
I NN
Sbjct: 411 IENN 414
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 48.4 bits (110), Expect = 4e-06
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +3
Query: 237 LVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNN 413
+V+AS D +I D VA ++++ + L N T I S +K+WD R
Sbjct: 9 IVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQR 68
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
S + H D ++G++ + D L+ S D TL + ++R
Sbjct: 69 SCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLR 108
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVSGARRGPELLVSASDDNTI 266
S D L +G + + VA++D+ GTR++ H +N V + P L ++S D +
Sbjct: 550 STDQLFLASGYSKD-VALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDV 608
Query: 267 KLWDARKR--NPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIK 392
KLWD R+ P + S+ V F+ +L+S VDN ++
Sbjct: 609 KLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
Score = 44.8 bits (101), Expect = 5e-05
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Frame = +3
Query: 96 DGSHLYTGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGARRGPELLVSASDDNTIK 269
D S + G D V V + +G + + G + + + + P ++++ S + ++K
Sbjct: 454 DPSLMVFGTLDGEVVVLNHESGKIFRYIPSNGSQSTILGLCWLKIYPSMVIAGSANGSLK 513
Query: 270 LWDARKRNPVAS-----------FDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI-RNN 413
L+D +K + + FD +TSV N T + L+SG + ++DI R
Sbjct: 514 LYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKDVALYDIGRGT 573
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLL-SNSMDNTLRIWDVRPFAPTERC 557
++ + H + + + S +L ++S D +++WD+R P+ C
Sbjct: 574 RLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQ-EPSRPC 621
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 137
+ +W++ + T + +CFSPD +L A DN V
Sbjct: 608 VKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEV 651
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 47.6 bits (108), Expect = 7e-06
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAV-WDVPTGTR--IKKLKGHANFVNSVSGA 218
V GH + + FSP + + D++ + WD TGT K K H ++ V
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
Query: 219 RRGPELLVSASDDNTIKLWDARK------RNPVASFDS-SYPVTSVLFN-DTAEKILSSG 374
L+++ S DNT++L+D RK +P+ F+ V V ++ D + SS
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSA 406
Query: 375 VDNVIKMWD 401
D ++ +WD
Sbjct: 407 EDGLLNIWD 415
Score = 45.2 bits (102), Expect = 4e-05
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Frame = +3
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSY--PVTSVLFNDTA 353
GH + V V+ + + S DD+ + LWDAR NPV + ++ + V +N
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHD 349
Query: 354 EK-ILSSGVDNVIKMWDIRN---NQIS---LKIKGHTDTVTGLSLSWDGAYLL-SNSMDN 509
+ IL+ DN ++++D R N + K +GH V + S D + + S++ D
Sbjct: 350 DNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDG 409
Query: 510 TLRIWDV-RPFAPTERCVKLMSG 575
L IWD R ++R K +G
Sbjct: 410 LLNIWDYDRVSKKSDRAAKSPAG 432
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
GH G + LCF + L++G+ D T+++W+ T I+ GH + + S+ G E
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDAL--GRER 318
Query: 237 LVSASDDNTIKLW 275
++S D T++L+
Sbjct: 319 VLSVGRDRTMQLY 331
Score = 33.9 bits (74), Expect = 0.087
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 324 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 503
V L + EK N +++ D++++ I H +VTG++LS D + S S
Sbjct: 106 VAKTLMQEQLEKSGRVRRANALRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSK 165
Query: 504 DNTLRIWDV 530
D T+ WDV
Sbjct: 166 DGTILHWDV 174
Score = 33.1 bits (72), Expect = 0.15
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIR-----------NNQISLKIK----GHTDTVTGLSLSWDGAYLLS 494
+ + GVD + +WDIR NNQ+ + GH V+ L A L S
Sbjct: 221 LATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCFREGTAELFS 280
Query: 495 NSMDNTLRIWDVRPFAPTERCVKLMSGHQ 581
S D TL IW+ E C GHQ
Sbjct: 281 GSYDGTLSIWNAEHRTYIESCF----GHQ 305
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 438 HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
H L++S DG YL + +D + +WD+R
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIR 236
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 47.2 bits (107), Expect = 9e-06
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWD-VPTGTRIKK-LKGHANFVNSVSGARRG 227
G + A + + H T ++ D +++V D + T T L+ H + V S++
Sbjct: 15 GGSAAFCSILWDHKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLA-LSND 73
Query: 228 PELLVSASDDNTIKLW---DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
LL S S D+ +KL+ + + F + P+ + FN + + ++G D IK+
Sbjct: 74 STLLASGSIDHCVKLYKFPSGEFQTNITRF--TLPIRVLAFNGSGSLLAAAGDDEGIKLI 131
Query: 399 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ + I +KGH VTGL +G L S T+ W+++
Sbjct: 132 NTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQ 176
Score = 46.4 bits (105), Expect = 2e-05
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 251
I L F+ GS L D + + + G+ ++ LKGH V + G ELL S
Sbjct: 107 IRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNG-ELLASID 165
Query: 252 DDNTIKLWDARKRNPVASF-------DSSYPVTSV---LFNDTAEKILSSGVDNVIKMWD 401
T+ W+ + N V SF D+ + + V ++ + G+ N + M+D
Sbjct: 166 TTGTVLCWELQ--NGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYD 223
Query: 402 IRNNQISLKIKG-HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ ++G H + + L+ + +G Y+ ++ +D + +WDV
Sbjct: 224 RFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDV 267
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
+++ H + L S D + L +G+ D+ V ++ P+G + + ++ G
Sbjct: 57 ILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSG 116
Query: 228 PELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDI 404
LL +A DD IKL + + V PVT + F+ E + S + W++
Sbjct: 117 -SLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWEL 175
Query: 405 RNNQISLKIKG 437
+N +S +KG
Sbjct: 176 QNGVVSFTLKG 186
Score = 41.9 bits (94), Expect = 3e-04
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA---NFVNSVS 212
V V+KGH G + L F P+G L + T TV W++ G LKG A F S+
Sbjct: 139 VRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIV 198
Query: 213 GARR-GPE--LLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGV 377
R P+ L N + ++D + + D + + + + I +SG+
Sbjct: 199 NIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGL 258
Query: 378 DNVIKMWDIRNNQ 416
D + +WD+ Q
Sbjct: 259 DKQVLLWDVDKKQ 271
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 46.8 bits (106), Expect = 1e-05
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCF--SPDGSHLY--TGATDNTVAVW------DVPTG 161
+W+ G C +++ +GH+GAI + S D + T + D T+ ++ V +
Sbjct: 135 VWSSAGSCSHIL--EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDST 192
Query: 162 TRI---KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 332
T++ K L+GH V SVS + G ++ S+S D TI LW+ N S S V
Sbjct: 193 TKVRAYKILRGHKASVQSVSAQKSG-NMVCSSSWDCTINLWNT---NESTSEGESVSVKK 248
Query: 333 VLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW-DGAYLLSNSMDN 509
N+ AE+ S G + + GHT V+ S+ W + + S+S D+
Sbjct: 249 RKGNNQAEESQSEG-------------EAVTSLVGHTQCVS--SVVWPEHDVIYSSSWDH 293
Query: 510 TLRIWDV 530
++R WDV
Sbjct: 294 SVRRWDV 300
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = +3
Query: 159 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV- 335
G + L GH V+SV +++ S+S D++++ WD + + +V
Sbjct: 262 GEAVTSLVGHTQCVSSVVWPEH--DVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVD 319
Query: 336 LFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL-SWDGA---YLLSNSM 503
+ +++ I + G D ++++WD R S + + + +S W + +LLS S
Sbjct: 320 VGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 504 DNTLRIWDVRPFAPTE 551
D + +WD+R T+
Sbjct: 380 DGKIMLWDLRTAVMTK 395
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 117 GATDNTVAVWDVP---TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 284
G +D + VWD T + + H++++++ + L+SAS D I LWD R
Sbjct: 331 GGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLR 389
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRIWDVRP 536
+LSS VD +++W + ++ +++ H VT ++ + D Y +S S+D +RIWDV
Sbjct: 377 LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQ 436
Query: 537 F 539
F
Sbjct: 437 F 437
Score = 43.2 bits (97), Expect = 1e-04
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 2/173 (1%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H G+I+ + FS DG +L + D V VW++ + RR E
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRVWNI------------------IEDERRDNEFE 297
Query: 240 VSASDDNTIKLW--DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 413
V+ SD + + D + P+ + + + L +E + V + + +
Sbjct: 298 VAESDSSCVYFGMNDKSQIEPLKTENEKIEKSRGLLRKKSESTCAVLPSKVFSISETPQH 357
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMS 572
+ +GHT + LS S G +LLS+S+D T+R+W V ++ C+++ S
Sbjct: 358 EF----RGHTGEILDLSWSEKG-FLLSSSVDETVRLWRV---GSSDECIRVFS 402
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +3
Query: 417 ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
+ + H ++ + S DG YL S D +R+W++
Sbjct: 249 VGQEFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNI 286
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Frame = +3
Query: 81 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS---------GARRGPE 233
L S DG +L G + ++D+ + H + S+S +
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSFPVLTNVDSENASS 450
Query: 234 LLVSASDDNTIKLWDARKR-NPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
LL S I ++D ++ +PV S S VTSV F K+L+SG D ++M+D+
Sbjct: 451 LLASGGKGRAIHIYDVKRNFDPVGSVCGSAAVTSVKFACNGRKMLTSGADR-LQMFDVNR 509
Query: 411 NQISLKIK-GHTDTVT 455
S+++ HT T++
Sbjct: 510 KASSVRLSPSHTQTLS 525
Score = 35.9 bits (79), Expect = 0.022
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Frame = +3
Query: 234 LLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
L+V+ D I ++D V SF D PV V+ + + ++ S + I D
Sbjct: 540 LVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPV-KVILDPSCNYLVCSYSNRTICFVD 598
Query: 402 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMS 572
++ + GH + VTG+ D +++S + D + +W + P R ++ ++
Sbjct: 599 FVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKL-PLRMATRIIRAVN 654
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVS 212
E V GH A+ + F PD H+ + A+D + VW +P + ++ + N +V+
Sbjct: 603 ELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKLPLRMATRIIRAVNENGRLTVA 662
Query: 213 GARRGPELLVSASDDN 260
+ ++ V +DN
Sbjct: 663 QLEKFKQIAVDLEEDN 678
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/102 (21%), Positives = 51/102 (50%)
Frame = +3
Query: 264 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHT 443
++L + + + P + + ++ + + + ++ D+ WD+ + +I + KGH+
Sbjct: 142 LELINPQHKGPWGALSPMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHS 201
Query: 444 DTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLM 569
D + + + +L+ S D T RIWD + T +CVK++
Sbjct: 202 DYLHTVVSRSSASQILTGSEDGTARIWDCK----TGKCVKVI 239
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 251
I + P ++T A D+ WDV +G KGH++++++V +R +++ S
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVV-SRSSASQILTGS 220
Query: 252 DDNTIKLWDARKRNPVASFDS----SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQI 419
+D T ++WD + V S S S + D +E L G + +W++ ++
Sbjct: 221 EDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLALWNLPASEC 280
Query: 420 --SLKIKGHTDTV 452
++ I H V
Sbjct: 281 VQTIPIPAHVQDV 293
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGA 218
M KGH+ + + S + TG+ D T +WD TG +K + + + + S A
Sbjct: 195 MTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMA 254
Query: 219 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
G E + + LW+ V + V V+F++ ++IL+ G + +++ +
Sbjct: 255 LDGSESWLVCGQGKNLALWNLPASECVQTIPIPAHVQDVMFDE--KQILTVGAEPLLRRF 312
Query: 399 DIRNNQIS 422
D+ +S
Sbjct: 313 DLNGALLS 320
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 46.0 bits (104), Expect = 2e-05
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPELL 239
++ ++ +SPDGS + + V ++ G +++ + H VN ++ + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 240 VSA-SDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 407
V+ DD TIK+WDA +F+ PV S+ + + + I S+ +D IK W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 408 NNQISLKIKGHTDTVTGLSLSWDGAYLLS 494
N + + T ++ S DG L S
Sbjct: 539 NMGSRVDYEAPGRWCTTMAYSADGTRLFS 567
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +3
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 413
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 839 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 898
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
++ K+KGH+ +TGL+ S L+S+ D L +W+
Sbjct: 899 EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLY--TGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGP 230
H G + + FS L T D T+ VWD TG + +GH V S+ +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 231 ELLVSASDDNTIKLW 275
+ + S + D IK W
Sbjct: 521 QFIFSTALDGKIKAW 535
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 257
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 871 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 929
Query: 258 NTIKLWD 278
+ +W+
Sbjct: 930 AQLCVWN 936
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +3
Query: 81 LCFSPDGSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 248
+ +S DG+ L++ T ++ + W+ G + +G V ++A
Sbjct: 556 MAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAA 615
Query: 249 SDDNTIKLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 395
DD +IK WD + + D+ + + + FN + S DN+IK+
Sbjct: 616 GDDFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKV 667
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 46.0 bits (104), Expect = 2e-05
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPELL 239
++ ++ +SPDGS + + V ++ G +++ + H VN ++ + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 240 VSA-SDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 407
V+ DD TIK+WDA +F+ PV S+ + + + I S+ +D IK W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 408 NNQISLKIKGHTDTVTGLSLSWDGAYLLS 494
N + + T ++ S DG L S
Sbjct: 539 NMGSRVDYEAPGRWCTTMAYSADGTRLFS 567
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +3
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 413
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 839 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 898
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
++ K+KGH+ +TGL+ S L+S+ D L +W+
Sbjct: 899 EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLY--TGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGP 230
H G + + FS L T D T+ VWD TG + +GH V S+ +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 231 ELLVSASDDNTIKLW 275
+ + S + D IK W
Sbjct: 521 QFIFSTALDGKIKAW 535
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 257
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 871 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 929
Query: 258 NTIKLWD 278
+ +W+
Sbjct: 930 AQLCVWN 936
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +3
Query: 81 LCFSPDGSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 248
+ +S DG+ L++ T ++ + W+ G + +G V ++A
Sbjct: 556 MAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAA 615
Query: 249 SDDNTIKLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 395
DD +IK WD + + D+ + + + FN + S DN+IK+
Sbjct: 616 GDDFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKV 667
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
++++ + + ++GHT + + F DG + T TD + +W V G I+ +GH
Sbjct: 96 VYDIRKLVDPALTLQGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHV 154
Query: 192 NFVNSVS-GARRGPELLVSASDDNTIKLWDARKRNPV 299
N N V R L S++N + ++D R PV
Sbjct: 155 NNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPV 191
Score = 36.7 bits (81), Expect = 0.012
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Frame = +3
Query: 204 SVSGARRGPELLVSAS--DDNTIKLWDARKRNPVASFDSSYP-------VTSVLFNDTAE 356
SV R G V AS DD T+++WD R P S P V V F+ +
Sbjct: 24 SVDYTRHGGASTVGASGSDDGTMQVWDPR-CPPEESVGVVRPAGICRSAVCCVEFDPSGG 82
Query: 357 KILSSG-VDNVIKMWDIRN-NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
++ G D ++DIR +L ++GHT TV+ + DG +++ D L++W V
Sbjct: 83 PAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRF-LDGGTVVTAGTDGCLKLWSV 141
Query: 531 RPFAPTERCVKLMSGHQHN 587
R ++ GH +N
Sbjct: 142 E----DGRVIRTYEGHVNN 156
Score = 36.7 bits (81), Expect = 0.012
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Frame = +3
Query: 225 GPELLVSASDDNTIKLWDARKR-NPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 398
GP + V +D ++D RK +P + + V+ V F D ++++G D +K+W
Sbjct: 82 GPAVAVGCADRKGY-VYDIRKLVDPALTLQGHTKTVSYVRFLDGGT-VVTAGTDGCLKLW 139
Query: 399 DIRNNQISLKIKGHTD--TVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ + ++ +GH + GLS+ +GA S +N + ++D R
Sbjct: 140 SVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRR 186
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/106 (28%), Positives = 48/106 (45%)
Frame = +3
Query: 84 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 263
C + +Y+G+ D T+ VW + ++ +K H + +N G G + SAS D
Sbjct: 179 CLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAIN---GLVAGDGRVYSASADGK 235
Query: 264 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
+K+W KR + S SS VL T E V++V+ D
Sbjct: 236 VKIWGKEKRKQIESTSSSSSSLHVL-KATLEGRAEVSVNSVVVSGD 280
Score = 34.7 bits (76), Expect = 0.050
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 2/170 (1%)
Frame = +3
Query: 21 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFV 200
+ G + + V+ H G++ L G L + + + VW P K G +
Sbjct: 47 ITGAYKPLAVLSAHVGSVSSLALC--GEFLLSASQGKDIIVWQQPDLKIFAKF-GQGD-- 101
Query: 201 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD--SSYPVTSVLFNDTAEKILSSG 374
SV + +A D+ I++W +RN +F + P T D K +
Sbjct: 102 GSVKALVSVGSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTT----KDYLGKFMKQ- 156
Query: 375 VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
N ++ R N L I+ H D+++ L++ + S S D TL++W
Sbjct: 157 -SNYVQ---TRRNHKRLWIE-HADSISCLAV--HAGIIYSGSWDKTLKVW 199
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
I S D +K+W + + + IK H D + GL ++ DG + S S D ++IW
Sbjct: 187 IYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-VAGDGR-VYSASADGKVKIW 239
Score = 30.7 bits (66), Expect = 0.81
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPD----GSHLYTGATDNTVAVWDVPTGTRIKKLK 182
V+ GH G + L SP+ G LY+G D ++ VW VP +++ K
Sbjct: 356 VIHGHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVWWVPKQDNLEEKK 404
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 45.2 bits (102), Expect = 4e-05
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 19/194 (9%)
Frame = +3
Query: 60 HTGA-IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG---------HANFVNSV 209
H G ++ + F P L T D + +W + +G KK+ H VN++
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 210 SGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVL---FNDTAEKILS 368
+ G ELL S +D + +W S+ S+ VL ++ ++S
Sbjct: 71 RFSPSG-ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLIS 129
Query: 369 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD--GAYLLSNSMDNTLRIWDVRPFA 542
VDN +WD+ + + H V G ++WD Y+ S S D T RI+ +P
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQG--VAWDPLAKYVASLSSDRTCRIYANKPQT 187
Query: 543 PTERCVKLMSGHQH 584
++ K+ QH
Sbjct: 188 KSKGVEKMNYVCQH 201
Score = 31.9 bits (69), Expect = 0.35
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Frame = +3
Query: 303 SFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKG---------HTDTVT 455
S+ PV +V F+ + + ++G D IK+W I + Q K+ H V
Sbjct: 9 SWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVN 68
Query: 456 GLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHNFEKNLLRCAWS 620
+ S G L S + L IW + P + T + K+ + K++L WS
Sbjct: 69 TIRFSPSGELLASGADGGELFIWKLHP-SETNQSWKVHKSLSFH-RKDVLDLQWS 121
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 45.2 bits (102), Expect = 4e-05
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 19/194 (9%)
Frame = +3
Query: 60 HTGA-IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG---------HANFVNSV 209
H G ++ + F P L T D + +W + +G KK+ H VN++
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 210 SGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVL---FNDTAEKILS 368
+ G ELL S +D + +W S+ S+ VL ++ ++S
Sbjct: 71 RFSPSG-ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLIS 129
Query: 369 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD--GAYLLSNSMDNTLRIWDVRPFA 542
VDN +WD+ + + H V G ++WD Y+ S S D T RI+ +P
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQG--VAWDPLAKYVASLSSDRTCRIYANKPQT 187
Query: 543 PTERCVKLMSGHQH 584
++ K+ QH
Sbjct: 188 KSKGVEKMNYVCQH 201
Score = 31.9 bits (69), Expect = 0.35
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Frame = +3
Query: 303 SFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKG---------HTDTVT 455
S+ PV +V F+ + + ++G D IK+W I + Q K+ H V
Sbjct: 9 SWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVN 68
Query: 456 GLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHNFEKNLLRCAWS 620
+ S G L S + L IW + P + T + K+ + K++L WS
Sbjct: 69 TIRFSPSGELLASGADGGELFIWKLHP-SETNQSWKVHKSLSFH-RKDVLDLQWS 121
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 45.2 bits (102), Expect = 4e-05
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 17/192 (8%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL-YTGATDNTVAVWDVPTGTRIKKL 179
QI +W+ E + H+ + + FSP + Y+ ++D T+ D+ TGT L
Sbjct: 195 QIGVWDFGKVYEKNVYGNIHSVQVNNMRFSPTNDDMVYSASSDGTIGYTDLETGTSSTLL 254
Query: 180 KGH------ANFVNSVSGARRGPELLVSASDDNT--IKLWDARKRN----PVASFDSSYP 323
+ AN + G E V + DN + + D R N P+
Sbjct: 255 NLNPDGWQGANSWKMLYGMDINSEKGVVLAADNFGFLHMIDHRTNNSTGEPILIHKQGSK 314
Query: 324 VTSVLFNDTA-EKILSSGVDNVIKMWDIRNNQ--ISLKIKGHTDTVTGLSLS-WDGAYLL 491
V + N E +LS G D+ ++WD+R Q SL H V S G +L
Sbjct: 315 VCGLDCNPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKIL 374
Query: 492 SNSMDNTLRIWD 527
+ DN +RIWD
Sbjct: 375 TTCQDNRIRIWD 386
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/104 (28%), Positives = 47/104 (45%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
FS DG L + D+TV + D TG +K L GH V E++ S S D +
Sbjct: 114 FSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEV 173
Query: 267 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 398
+LW+ + S P+ S+ F+ E +L+ + + MW
Sbjct: 174 RLWNTTTSECIRSHLFYRPIASIAFHAEGE-LLAVASGHKLHMW 216
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 9/170 (5%)
Frame = +3
Query: 12 IWNVYGQCEN---VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK-- 176
IW++ C + ++ K ++ ++ +SPDG+ + T + + ++ +++
Sbjct: 388 IWDM-SNCSHQFQALIAKETPISVTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQHT 446
Query: 177 -LKGHANFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL--FN 344
+ H VN ++ A +L +++ DD IK+WD R PV S+ +
Sbjct: 447 EIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHFTFEGHDAPVYSICPHYK 506
Query: 345 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS 494
+ + I S+ +D IK W N + T + S DG L S
Sbjct: 507 ENIQFIFSTAIDGKIKAWLYDNLGSRVDYDAPGKWCTRMLYSADGTRLFS 556
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +3
Query: 327 TSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 503
T + F+ +++ G+ D+ I ++++R +++ K+KGH +TGL+ S L+S+
Sbjct: 865 TFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGA 924
Query: 504 DNTLRIWDV 530
D + W +
Sbjct: 925 DAQICFWSI 933
Score = 30.7 bits (66), Expect = 0.81
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 81 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 257
L F P D + + G D+T+ +++V KLKGH + ++ + +LVS+ D
Sbjct: 867 LAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFS-TALNILVSSGAD 925
Query: 258 NTIKLWDA---RKRNPVA 302
I W KR VA
Sbjct: 926 AQICFWSIDTWEKRKSVA 943
Score = 29.1 bits (62), Expect = 2.5
Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 8/135 (5%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR-- 224
+KGH I L FS + L + D + W + T + K + + +G R
Sbjct: 900 LKGHQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRKSVAIQMPAGKAANGDTRVQ 959
Query: 225 --GPELLVSASDDNTIKLWDARKRNPVASF---DS-SYPVTSVLFNDTAEKILSSGVDNV 386
+L + + + ++DA K + + DS S P++S ++ ++ I ++ D
Sbjct: 960 FHVDQLRILVVHETQLAVFDASKMECIRQWIPQDSLSAPISSAVYACNSQLIYTTFRDGN 1019
Query: 387 IKMWDIRNNQISLKI 431
I ++D + ++ +I
Sbjct: 1020 IGVFDADSLRLRCRI 1034
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 45.2 bits (102), Expect = 4e-05
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 7/182 (3%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYT---GATDNTVAVWDVPTGTRIKK 176
+ IW Y K G I L +S DG + G + V + +G+ + +
Sbjct: 80 VRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGE 139
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFNDTA 353
GH+ V S + P +V+ +D + ++ + ++S + S V V F
Sbjct: 140 FDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDG 199
Query: 354 EKILSSGVDNVIKMWDIRNNQISLKIK---GHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
K ++ D ++D + +I ++ GH ++ +S S DG +L+ S D + +IW
Sbjct: 200 SKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIW 259
Query: 525 DV 530
D+
Sbjct: 260 DI 261
Score = 37.1 bits (82), Expect = 0.009
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP---TGTRIKKLK--GHANFVNS-VSGA 218
GH G+I + +SPDG + T + D + +WD+ +G+ L G + V+ + G
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGC 289
Query: 219 RRGPELLVSASDDNTIKLWDAR--KRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVI 389
+ +V+ S TI ++ A ++P V+S+ + A+ ILS D +I
Sbjct: 290 LWQNDHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLI 349
Query: 390 KMW 398
W
Sbjct: 350 CKW 352
Score = 33.9 bits (74), Expect = 0.087
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD-VPTGTRIKKLKGHANFVNSVSGARR 224
V++ H GAI + +SPD S + + VWD V ++K + H+ +N ++ +
Sbjct: 486 VLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPN 545
Query: 225 GPELLVSASDDNTIKLWDARK-RNPVASFDSSY--PVTSVLFNDTAEKILSSGVDNVIKM 395
++ + S D + +++ K + + ++ V + F D + ++SSG D I++
Sbjct: 546 S-TMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDSH-VVSSGEDACIRV 603
Query: 396 W 398
W
Sbjct: 604 W 604
Score = 33.9 bits (74), Expect = 0.087
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKK 176
+ ++W+ + + M H+ I L +SP+ + + TG+ D V V++V P +R+
Sbjct: 514 EAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTI 573
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLW 275
H V + A +VS+ +D I++W
Sbjct: 574 KGAHLGGVYGLGFA--DDSHVVSSGEDACIRVW 604
Score = 33.1 bits (72), Expect = 0.15
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIK-KLKGHANFVNSVSGARRGPELLVS--ASDD 257
+SP+G + +G TV +W +K + K A ++ + + G ++ S
Sbjct: 64 YSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMRIVASGDGKGK 123
Query: 258 NTIK--LWDARKRNPVASFDS-SYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQISL 425
+ ++ +WD+ V FD S V S T +I++ G D ++ ++ + L
Sbjct: 124 SLVRAFMWDSGSN--VGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKL 181
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+ H++ V + + DG+ ++ S D I+D
Sbjct: 182 SSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYD 215
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
+TG I L +S G H+YTG+ DNT+ W + G+ + + GH + V+++ +L
Sbjct: 586 YTG-IHALAYSEYG-HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVN---GVL 640
Query: 240 VSASDDNTIKLW 275
S S D T++LW
Sbjct: 641 YSGSWDGTVRLW 652
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +3
Query: 324 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 503
+ ++ +++ SG DN IK W +++ + + GH V+ L + L S S
Sbjct: 589 IHALAYSEYGHVYTGSG-DNTIKAWSLQDGSLLCTMSGHKSVVSTLVVV--NGVLYSGSW 645
Query: 504 DNTLRIWDV 530
D T+R+W +
Sbjct: 646 DGTVRLWSL 654
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 243 SASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMWDIRNNQI 419
+ S DNTIK W + + + + V S L +L SG D +++W + +N +
Sbjct: 602 TGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLV--VVNGVLYSGSWDGTVRLWSLSDNSL 659
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVW----DVPTGTRIKKL-KGHANFVNSVSGAR-RGPELLV-SA 248
S DG + TGA D V VW D P G+R +L K V+ R P +++ S
Sbjct: 3339 SHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASG 3398
Query: 249 SDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 425
SDD T+ +WD + V D P++++ ND +I+++ V+ +W I + +++
Sbjct: 3399 SDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTA-AGTVLAVWSINGDCLAV 3457
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +3
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 413
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 850 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 909
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
++ K+KGH+ +TGL+ S L+S+ D L +W+
Sbjct: 910 EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 9/166 (5%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGP 230
H G + + FS L T D T+ VWD TG + +GH V SV +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGV----DNVIKM 395
+ + S + D IK W +D+ T++ ++ ++ S G ++ I
Sbjct: 521 QFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVE 580
Query: 396 WDIRNNQISLKIKG-HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
W+ + +G H ++ + L+ D +++ WD+
Sbjct: 581 WNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDM 626
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 257
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 882 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 940
Query: 258 NTIKLWD 278
+ +W+
Sbjct: 941 AQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +3
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 413
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 850 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 909
Query: 414 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
++ K+KGH+ +TGL+ S L+S+ D L +W+
Sbjct: 910 EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 9/166 (5%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGP 230
H G + + FS L T D T+ VWD TG + +GH V SV +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGV----DNVIKM 395
+ + S + D IK W +D+ T++ ++ ++ S G ++ I
Sbjct: 521 QFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVE 580
Query: 396 WDIRNNQISLKIKG-HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
W+ + +G H ++ + L+ D +++ WD+
Sbjct: 581 WNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDM 626
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 257
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 882 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 940
Query: 258 NTIKLWD 278
+ +W+
Sbjct: 941 AQLCVWN 947
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H ++ L +SPD ++L +G+ DN+ +WDV G+ + L H ++V V+ + +
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA-KYV 110
Query: 240 VSASDDNTIKLW 275
S S D T +++
Sbjct: 111 ASLSSDRTCRIY 122
Score = 36.7 bits (81), Expect = 0.012
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD--GAYLLSNSMDNTLRIWDVR 533
++S VDN +WD+ + + H V G ++WD Y+ S S D T RI+ +
Sbjct: 68 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQG--VAWDPLAKYVASLSSDRTCRIYANK 125
Query: 534 PFAPTERCVKLMSGHQH 584
P ++ K+ QH
Sbjct: 126 PQTKSKGVEKMNYVCQH 142
Score = 35.5 bits (78), Expect = 0.029
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +3
Query: 357 KILSSGVDN----VIKMWDIRNNQ---ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 515
++L+SG D + K+ NQ + + H V L S D AYL+S S+DN+
Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 77
Query: 516 RIWDV 530
IWDV
Sbjct: 78 IIWDV 82
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +3
Query: 213 GARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIK 392
GA P + + +L+D R+ ++S+ + + L + ++SS +D ++
Sbjct: 419 GASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKLVAPESHLLVSSSLDKTLR 478
Query: 393 MWDIRNNQI--SLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
+WD+R + +KGH D V+G S+ W G ++S S +N
Sbjct: 479 IWDLRKSWTPQPFVVKGHNDGVSGFSI-W-GKDVISISRNN 517
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 390 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+++D+R N + H VT L ++ + L+S+S+D TLRIWD+R
Sbjct: 437 RLFDLRENGFISSWRAHDGYVTKL-VAPESHLLVSSSLDKTLRIWDLR 483
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 44.0 bits (99), Expect = 8e-05
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Frame = +3
Query: 90 SPDGSHLYTG-ATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
SP S TG +D T P G GH + V V+ + S DD+ +
Sbjct: 251 SPGSSFKQTGEGSDKTGGPSVGPRGI----YNGHKDTVEDVAFCPSSAQEFCSVGDDSCL 306
Query: 267 KLWDARK-RNPVASFDSSY--PVTSVLFNDTAEK-ILSSGVDNVIKMWDIRN---NQIS- 422
LWDAR +P + ++ + V +N IL+ DN ++++D RN N +
Sbjct: 307 MLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGS 366
Query: 423 --LKIKGHTDTVTGLSLSWDGAYLL-SNSMDNTLRIWDV-RPFAPTERCVKLMSG 575
K +GH V + S D + + S++ D L IWD R +ER K G
Sbjct: 367 PVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKTPDG 421
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWD 149
V +GH A++ + +SPD S ++ + A D + +WD
Sbjct: 368 VYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 404
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +3
Query: 324 VTSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISL--KIKGHTDTVTGLSLSWDGAYLLS 494
VT+++++ + +L SG D I++W++ +L IK H TVT SLS G +LS
Sbjct: 856 VTALIYH---KGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLS 912
Query: 495 NSMDNTLRIWDV 530
S D T+R+W +
Sbjct: 913 GSADKTIRVWQI 924
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = +3
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDT-AEK 359
GH+ + +S ++ L+SAS DN+++LW + + F + VTSV FN +
Sbjct: 354 GHSGDILDISWSKNNR--LLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDH 411
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
+S +D +++W Q+ + VT + DG ++ ++ + R ++V
Sbjct: 412 FISGSIDGKVRIWSASQCQV-VDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNV--- 467
Query: 540 APTERCVKLMSGH--QHNFEKN 599
+ C++L GH HN +K+
Sbjct: 468 --SGHCLQL-DGHICLHNKKKS 486
Score = 36.7 bits (81), Expect = 0.012
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 176
++ H GAI+ + FSPDG +L + D + VW V R ++
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEE 288
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERC 557
+I+ H + + S DG YL S D LR+W V ERC
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV---VEDERC 286
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP-ELLVSASDDNTI 266
S D S + + D+ V + + + K KG N N +S + + +VSA DD+++
Sbjct: 502 STDPSRVMVASADSQVRI--ISGRNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSV 559
Query: 267 KLWDARKRNPVASFDSSYPVTSVLFNDTAEK 359
+W+ +P S + T L + EK
Sbjct: 560 YVWNCVGHDPEQSSPGFFSHTKRLKIRSFEK 590
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = +3
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDT-AEK 359
GH+ + +S ++ L+SAS DN+++LW + + F + VTSV FN +
Sbjct: 354 GHSGDILDISWSKNNR--LLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDH 411
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
+S +D +++W Q+ + VT + DG ++ ++ + R ++V
Sbjct: 412 FISGSIDGKVRIWSASQCQV-VDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNV--- 467
Query: 540 APTERCVKLMSGH--QHNFEKN 599
+ C++L GH HN +K+
Sbjct: 468 --SGHCLQL-DGHICLHNKKKS 486
Score = 36.7 bits (81), Expect = 0.012
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 176
++ H GAI+ + FSPDG +L + D + VW V R ++
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEE 288
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERC 557
+I+ H + + S DG YL S D LR+W V ERC
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV---VEDERC 286
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP-ELLVSASDDNTI 266
S D S + + D+ V + + + K KG N N +S + + +VSA DD+++
Sbjct: 498 STDPSRVMVASADSQVRI--ISGRNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSV 555
Query: 267 KLWDARKRNPVASFDSSYPVTSVLFNDTAEK 359
+W+ +P S + T L + EK
Sbjct: 556 YVWNCVGHDPEQSSPGFFSHTKRLKIRSFEK 586
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 43.6 bits (98), Expect = 1e-04
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Frame = +3
Query: 12 IWNVYGQCENVM---VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK-- 176
IWN+ C + ++K + ++ ++ +SPDG+ L T + + V+ G+ +++
Sbjct: 390 IWNM-AACSVIFQGSIVKEPSISVTRVAWSPDGNLLGVSFTKHLIHVYAYQ-GSDLRQHL 447
Query: 177 -LKGHANFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL--FN 344
+ H VN ++ A ++ +V+ DD IK+WD + PV S+
Sbjct: 448 EIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLFTFEGHEAPVYSICPHQK 507
Query: 345 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS 494
+ + I S+ +D IK W N + T + S DG+ L S
Sbjct: 508 ENIQFIFSTALDGKIKAWLYDNVGSRVDYDAPGQWCTTMLYSADGSRLFS 557
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 327 TSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 503
T + F+ I++ G+ D+ I ++++R +++ K+KGH +TGL+ S L+S+
Sbjct: 876 TFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGA 935
Query: 504 DNTLRIW 524
D L W
Sbjct: 936 DAQLFFW 942
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 81 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 257
L F P D + + G D+++ +++V KLKGH + ++ + +LVS+ D
Sbjct: 878 LAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFS-TALNILVSSGAD 936
Query: 258 NTIKLWDA 281
+ W A
Sbjct: 937 AQLFFWTA 944
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 43.6 bits (98), Expect = 1e-04
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVM-KGHTGAIMQL---CFSPDGSHLYTGATDNTVAVWDVPTGTRIK 173
I +W++ ++ V+ K G + L + P + +++V WD+ T ++
Sbjct: 145 IFLWSLDCSKKSAEVLSKDSAGMLHSLSGGAWDPHDVNAVAATGESSVQFWDLRTMKKVN 204
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN-PVASFDSSYPVT-SVLFND 347
++ HA+ V V + +LV+A D++ I +WD RK PV T +V N
Sbjct: 205 SIE-HAH-VRGVDYNPKREHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNP 262
Query: 348 TAEK-ILSSGVDNVIKMW 398
+ ILS+G D+V+ +W
Sbjct: 263 EYDGLILSAGTDSVVNLW 280
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNT-VAVWDVPTG-TRIKKLKGHANFVNSVSGARRGPELLVSASDDN 260
++P H+ A D + + VWD+ +++L GH ++ +V L++SA D+
Sbjct: 216 YNPKREHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDS 275
Query: 261 TIKLWDA 281
+ LW A
Sbjct: 276 VVNLWYA 282
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 43.2 bits (97), Expect = 1e-04
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 30 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
+ VM +KGH A+ LCFSP+ + T + D ++ VW++
Sbjct: 278 EVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
Score = 37.1 bits (82), Expect = 0.009
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = +3
Query: 213 GARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNV-I 389
G G ++ S S+ I LW + + D++ + + L++ +
Sbjct: 204 GTADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADV 263
Query: 390 KMWDI---RNNQIS-----LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
K+W+I ++ + +++KGH VT L S + +++ S D ++R+W++
Sbjct: 264 KVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
Score = 34.3 bits (75), Expect = 0.066
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 146
+KGH A+ LCFS DG L T D + V+
Sbjct: 82 LKGHGDAVTGLCFSSDGKSLATACADGVIRVF 113
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 405 RNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
R++ + L +KGH D VTGL S DG L + D +R++
Sbjct: 73 RHHPLDLNTLKGHGDAVTGLCFSSDGKSLATACADGVIRVF 113
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +3
Query: 411 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKLMSGHQHNF 590
N L+ KGHT VT +S G ++ S S D ++R+W+V T RC+K+ F
Sbjct: 413 NSCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVE----TGRCLKVW-----QF 463
Query: 591 EKNLLRCAWS 620
++ ++ AW+
Sbjct: 464 DEAIMCVAWN 473
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 173
KGHTGA+ + G + +G+TD +V +W+V TG +K
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H ++ + DG+ +++G D +W + +G + + H + +++ G LL
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIP-GMNLL 129
Query: 240 VSASDDNTIKLWDARKRNPV 299
+ S D T+K WD R++NPV
Sbjct: 130 ATGSWDKTLKYWDTRQQNPV 149
Score = 27.5 bits (58), Expect = 7.6
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVP-TGTRIKKL-KGHANFVNSV--SGARRGPEL 236
+I L FSP L + DN V W++ +G + K + V S +
Sbjct: 27 SISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 237 LVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 407
+ S D K+W PV P+ ++ + + + D +K WD R
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTR 144
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 42.7 bits (96), Expect = 2e-04
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Frame = +3
Query: 30 QCEN-VMVMKGHT-GAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKK-----LKG 185
+CE+ M + H+ G I ++ F+P D TG +D+ V +W K
Sbjct: 428 RCESQFMEDRPHSKGLINRIMFTPWDDPCFITGGSDHAVVLWRDQCENNAWKPTLLHRDL 487
Query: 186 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL 365
H++ V V+G R +L S DD +DAR+ T+++ N ++
Sbjct: 488 HSSAVMGVTGMRHNNHVL-SCGDDRRFVGFDAREEKVTFKHRLDNRCTNIMPNPRDVNLV 546
Query: 366 ---SSGVDNVIKMWDIRNNQISL-----KIKGHTDTVTGLSLSW--DGAYLLSNSMDNTL 515
+ +D ++++D+R Q L K + ++ SW DG ++ S S D +
Sbjct: 547 MVNTRQLDRQLRLYDVRLPQTELFSFGWKQESSESQSALINQSWSPDGLHISSGSADPVI 606
Query: 516 RIWDVRPFAPT 548
I+D+R AP+
Sbjct: 607 HIFDIRYNAPS 617
Score = 32.3 bits (70), Expect = 0.27
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGARRGPELLV 242
A++ +SPDG H+ +G+ D + ++D+ L K H V P LLV
Sbjct: 584 ALINQSWSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEWHSSYP-LLV 642
Query: 243 SASDDNTI---KLW 275
S S D I KLW
Sbjct: 643 SISSDLAIGIHKLW 656
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 42.3 bits (95), Expect = 2e-04
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Frame = +3
Query: 153 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS--SYPV 326
P G + L+ H + VN ++ + VSASDD+T+K+WD+RK SF S +Y +
Sbjct: 1069 PRGVLVAHLQEHRSAVNDIATSS-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL 1127
Query: 327 -------TSVLFNDTAEKILSSGVDNVIKMWDI 404
T++L N T +++ D VI M+ I
Sbjct: 1128 EGSRGMCTTMLRNST--QVVVGASDGVIHMFSI 1158
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 429 IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
++ H V ++ S D ++ +S S D+T+++WD R
Sbjct: 1077 LQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSR 1111
Score = 28.3 bits (60), Expect = 4.3
Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 28/189 (14%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR--- 221
++ H A+ + S D S + + D+TV VWD + K + + + G+R
Sbjct: 1077 LQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD--SRKLEKDISFRSRLTYHLEGSRGMC 1134
Query: 222 ----RGPELLVSASDDNTIKLW--DARKR---NPVASFDSSYPVTS---------VLFND 347
R +V + D I ++ D R N V + + L N
Sbjct: 1135 TTMLRNSTQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALVSLLNY 1194
Query: 348 TAEK-----ILSSGVDNVIKMWDIRNNQISLKIKGHTDT--VTGLSLSWDGAYLLSNSMD 506
TA+ ++ S + I +WD R++ + +K + + V+ L S G + +S S
Sbjct: 1195 TADSLSGPMVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSR 1254
Query: 507 NTLRIWDVR 533
L +WD+R
Sbjct: 1255 GVLTLWDLR 1263
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/127 (21%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS-- 212
+++ + GH G+I ++ +S DGS + + + D + +W++ + +++ G F +SV
Sbjct: 227 HMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS----QEVVGPVLFGHSVRVW 282
Query: 213 GARRGPELLVSASDDNTIKLWDA-RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVI 389
L+V+A +D T ++W + V + L++ + ++++G D+ I
Sbjct: 283 DCCISDSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAI 342
Query: 390 KMWDIRN 410
K+ + N
Sbjct: 343 KVHQLHN 349
Score = 35.1 bits (77), Expect = 0.038
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Frame = +3
Query: 201 NSVSGARRGPELLVSASDDNTIKLWDARKRN---PVASFDSSYPVTSVLFNDTAE--KIL 365
+S +LL DN++ +WD ++ + S + T L+ D+ +I
Sbjct: 138 DSTGSLEEEDKLLAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIA 197
Query: 366 SSGVDNVIKMW--------DIRNNQIS----LKIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
S + N I +W ++ + S L++ GH ++ + S DG+ ++S S D
Sbjct: 198 SGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDR 257
Query: 510 TLRIWDV 530
+ RIW++
Sbjct: 258 SARIWEI 264
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/127 (21%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +3
Query: 39 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS-- 212
+++ + GH G+I ++ +S DGS + + + D + +W++ + +++ G F +SV
Sbjct: 227 HMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS----QEVVGPVLFGHSVRVW 282
Query: 213 GARRGPELLVSASDDNTIKLWDA-RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVI 389
L+V+A +D T ++W + V + L++ + ++++G D+ I
Sbjct: 283 DCCISDSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAI 342
Query: 390 KMWDIRN 410
K+ + N
Sbjct: 343 KVHQLHN 349
Score = 35.1 bits (77), Expect = 0.038
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Frame = +3
Query: 201 NSVSGARRGPELLVSASDDNTIKLWDARKRN---PVASFDSSYPVTSVLFNDTAE--KIL 365
+S +LL DN++ +WD ++ + S + T L+ D+ +I
Sbjct: 138 DSTGSLEEEDKLLAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIA 197
Query: 366 SSGVDNVIKMW--------DIRNNQIS----LKIKGHTDTVTGLSLSWDGAYLLSNSMDN 509
S + N I +W ++ + S L++ GH ++ + S DG+ ++S S D
Sbjct: 198 SGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDR 257
Query: 510 TLRIWDV 530
+ RIW++
Sbjct: 258 SARIWEI 264
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 42.3 bits (95), Expect = 2e-04
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Frame = +3
Query: 174 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD----ARKRN-PVASFDSSYPVTSVL 338
KL GH VN+V G ++LVS SDD I LW+ +RK + P ++ + +
Sbjct: 50 KLNGHEGCVNAVEFNSTG-DVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
Query: 339 FNDTAEKILSSGVDNVIKMWDI-RNNQISLKIKG-HTDTVTGLS-LSWDGAYLLSNSMDN 509
F D I++SG D +++ I N ++ K G H V L+ L D S D
Sbjct: 109 FTDD-RTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGEDG 167
Query: 510 TLRIWDVRPFAPT 548
++ +D+R + T
Sbjct: 168 FVQHFDIRSNSAT 180
Score = 32.7 bits (71), Expect = 0.20
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSP--DGSHLYTGATDNTVAVWDVPTGTRI-- 170
QI++WN + GH + Q F P D + T D V + + ++
Sbjct: 78 QIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRLGQILENGKVET 137
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS 317
K+L H V ++ P + S +D ++ +D R + SS
Sbjct: 138 KRLGRHHGRVYKLAVLPGDPNVFYSCGEDGFVQHFDIRSNSATMVLYSS 186
Score = 31.9 bits (69), Expect = 0.35
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
F P+ ++ +G+ + +W G ++ + G VN + P LL S + ++
Sbjct: 329 FGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIP-LLASCGIEKSV 387
Query: 267 KLW 275
KLW
Sbjct: 388 KLW 390
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHA-NFVNSVSGARR 224
+ GH G + + F+ G L +G+ D + +W+ +G+R + GH N +
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 225 GPELLVSASDDNTIKLWDARKRNPVAS-----FDSSYPVTSVLFNDTAEKILSSGVDNVI 389
++++ D ++L + V + +VL D S G D +
Sbjct: 111 DDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGD-PNVFYSCGEDGFV 169
Query: 390 KMWDIRNNQISL 425
+ +DIR+N ++
Sbjct: 170 QHFDIRSNSATM 181
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 41.5 bits (93), Expect = 4e-04
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 221
V + GH G I L FSPDG +L TG D V +W + + A+F+
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLL-----ASFLRQQEPIN 245
Query: 222 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
+ L++ K + + + + V + ++D + +LS+ D +++W
Sbjct: 246 QQAALVLFPQ-----KAFHIEETPFQELYGHTGDVLDLAWSD-SNLLLSASKDKTVRLWR 299
Query: 402 IRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRIW 524
+Q L + H + VT + + + S S+D RIW
Sbjct: 300 TGCDQ-CLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIW 340
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/161 (20%), Positives = 63/161 (39%), Gaps = 4/161 (2%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 236
GHTG ++ L +S D + L + + D TV +W + H N+V V
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNN 327
Query: 237 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 416
S S D ++W + VA D ++++ + + + + + I +N
Sbjct: 328 FASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFYQILDND 387
Query: 417 I----SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+ + I+G +L +S D+ +RI+D
Sbjct: 388 VIMDEQILIRGRNRITAVEFCPGSSEKILVSSEDSKVRIFD 428
Score = 37.1 bits (82), Expect = 0.009
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Frame = +3
Query: 162 TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 341
T ++L GH V ++ + LL+SAS D T++LW + F + VT V F
Sbjct: 263 TPFQELYGHTGDVLDLAWS--DSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEF 320
Query: 342 NDTAEKILSSG-VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 518
N + +SG +D ++W + ++ + D+++ +S +G + + R
Sbjct: 321 NPVNKNNFASGSIDGKARIWGLSEERV-VAWTDVRDSISAISYQPNGNGFVVGCITGNCR 379
Query: 519 IWDV 530
+ +
Sbjct: 380 FYQI 383
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
KI GH + L S DG YL + D ++IW +
Sbjct: 193 KINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 41.1 bits (92), Expect = 6e-04
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Frame = +3
Query: 30 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNS 206
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+ T + + K HA+ V S
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKS 189
Query: 207 VSGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSG 374
++ + G + LVS ++WD +AS D + +++ ++L
Sbjct: 190 LTFSESG-KFLVSLGAP-LCRVWDVNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVA 247
Query: 375 VD----NVIKMWDIRN-NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+ I WD + + S K+ ++++ ++S DG L +++ + I D
Sbjct: 248 ANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIID 303
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 41.1 bits (92), Expect = 6e-04
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Frame = +3
Query: 30 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNS 206
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+ T + + K HA+ V S
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKS 189
Query: 207 VSGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSG 374
++ + G + LVS ++WD +AS D + +++ ++L
Sbjct: 190 LTFSESG-KFLVSLGAP-LCRVWDVNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVA 247
Query: 375 VD----NVIKMWDIRN-NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+ I WD + + S K+ ++++ ++S DG L +++ + I D
Sbjct: 248 ANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIID 303
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 285 KRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 461
K NPVA + + S+ F++ + + G D ++++D ++ +K + +
Sbjct: 292 KSNPVARWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCC 351
Query: 462 SLSWDGAYLLSNSMDNTLRIWDV 530
+ S DG YLL+ D+ +++W +
Sbjct: 352 AWSMDGKYLLTGGEDDLVQVWSM 374
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Frame = +3
Query: 66 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 245
GAI + FS DG++L T D + ++D T + +K + + + + G LL
Sbjct: 304 GAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 246 ASDDNTIKLWDARKRNPVA------------SFDS--SYPVTSVLFNDTAEKILSSGVDN 383
DD +++W R VA +FDS S P + + + S G D
Sbjct: 364 GEDD-LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEGSGENVMYRFGSVGQDT 422
Query: 384 VIKMWDIRNNQISLKIK 434
+ +WD+ ++I + ++
Sbjct: 423 QLLLWDLEMDEIVVPLR 439
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 212
+K + GA++ +S DG +L TG D+ V VW + + +GH ++V+ V+
Sbjct: 341 VKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/90 (18%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 198 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 374
+NS++ + G L + D ++++D + V S Y + ++ + +L+ G
Sbjct: 306 INSIAFSNDGA-YLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGG 364
Query: 375 VDNVIKMWDIRNNQISLKIKGHTDTVTGLS 464
D+++++W + + ++ +GH V+G++
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 29.1 bits (62), Expect = 2.5
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 13/93 (13%)
Frame = +3
Query: 93 PDGSHLYTGATDNTVAVWD--VPTGT-----------RIKKLKGHANFVNSVSGARRGPE 233
P GS Y+ T + A WD VP GT ++ + H +SG E
Sbjct: 442 PGGSPTYS--TGSQSAHWDNIVPMGTLQPAPCMRDVPKLSPVVAHRVHTEPLSGLIFTQE 499
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 332
L++A + +K+W P +S +++ P TS
Sbjct: 500 SLITACREGHLKIWTRPDTQPSSSSEATNPTTS 532
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/99 (21%), Positives = 47/99 (47%)
Frame = +3
Query: 237 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 416
L++A++D I+++DA+ V+ F + V + + + + G + D + +
Sbjct: 222 LITANNDCKIRVFDAQSFTRVSEFALDWSVNNTSVSPDGKLLAVVGDSTECLISDSHSGK 281
Query: 417 ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ ++GH D + +G L + + D R+WD+R
Sbjct: 282 VISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIR 320
Score = 39.9 bits (89), Expect = 0.001
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +3
Query: 93 PDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 269
P GS L T D + V+D + TR+ + + VN+ S + G +LL D
Sbjct: 216 PSGSLRLITANNDCKIRVFDAQSFTRVSEFALDWS-VNNTSVSPDG-KLLAVVGDSTECL 273
Query: 270 LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQISLKI-KGHT 443
+ D+ ++S + IL++G D ++WDIRN S + KG+
Sbjct: 274 ISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNM 333
Query: 444 DTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ GL + +G +L + + I+D +
Sbjct: 334 GAIRGLKFTPEGRFLAMAEPADFVHIFDTQ 363
Score = 36.7 bits (81), Expect = 0.012
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W++ E+ V+KG+ GAI L F+P+G L + V ++D +G +
Sbjct: 316 LWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLF 375
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY 320
+ +S + L V +D L + ++R DS Y
Sbjct: 376 GEIAGISFSPDTEALYVGVADRTYGSLLEYKRRKDNHYMDSFY 418
Score = 34.7 bits (76), Expect = 0.050
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 269
SPDG L + D +G I L+GH ++ + S +L + + D +
Sbjct: 257 SPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDY-SFASAWHPNGLILATGNQDTACR 315
Query: 270 LWDARKRNPVASF 308
LWD RNP SF
Sbjct: 316 LWDI--RNPSESF 326
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRG 227
++GH + P+G L TG D +WD+ + LKG+ + + G
Sbjct: 286 LRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEG 345
Query: 228 PELLVSASDDNTIKLWDAR 284
L A + + ++D +
Sbjct: 346 -RFLAMAEPADFVHIFDTQ 363
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKK 176
+ ++W+ + + M HT I L +SP+ + TG+ D V V++V P +RI
Sbjct: 379 EAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITA 438
Query: 177 LKGHANFVNSVSGARRGPELLVSASDDNTIKLW 275
H VN+V A + S+ +D +++LW
Sbjct: 439 RNAHLGGVNAV--AFIDDCTVASSGEDASVRLW 469
Score = 38.7 bits (86), Expect = 0.003
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
GH+ ++ F P + T D V +D P + H+NFVN + + G +
Sbjct: 6 GHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTK 65
Query: 234 LLVSASDDNTIKLWDAR---KRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
+ +SD + ++D + K +AS D + +V ++ ++++L+ D K+W+
Sbjct: 66 FITVSSDKKGM-IYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
Query: 402 I-RNNQISLKIKGHTDTVTG------LSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCV 560
+ + I IK + +G + W +L++ S+ T+ ++ ++
Sbjct: 125 VAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQNDHLITVSLGGTMSLFSADDM---DKPP 181
Query: 561 KLMSGHQHN 587
L+SGH N
Sbjct: 182 LLLSGHIKN 190
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARR 224
V++ H GA+ + +SPD + +G + VWD T ++ + H +NS++ +
Sbjct: 351 VLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPN 410
Query: 225 GPELLVSASDDNTIKLWDARK--RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKM 395
+++ + S D + +++ K + + + ++ V +V F D + SSG D +++
Sbjct: 411 N-KMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDC-TVASSGEDASVRL 468
Query: 396 WDI 404
W I
Sbjct: 469 WHI 471
Score = 36.7 bits (81), Expect = 0.012
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS------VSGA 218
GH G+I + +SPD + T + D + VW+V I + +F+ S + G
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGC 153
Query: 219 RRGPELLVSASDDNTIKLW--DARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVI 389
+ L++ S T+ L+ D + P+ VTS+ + + + ILS D +I
Sbjct: 154 LWQNDHLITVSLGGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGLI 213
Query: 390 KMW 398
W
Sbjct: 214 VKW 216
Score = 29.9 bits (64), Expect = 1.4
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 9/154 (5%)
Frame = +3
Query: 183 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-----VTSVLFND 347
GH+ V S + P + + +D + +D P F SS+ V + ++
Sbjct: 6 GHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDG----PPFKFHSSHREHSNFVNCIRYSP 61
Query: 348 TAEKILSSGVDNVIKMWDIRNNQISLKIK---GHTDTVTGLSLSWDGAYLLSNSMDNTLR 518
K ++ D ++D + ++ GH ++ +S S D +L+ S D + +
Sbjct: 62 DGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAK 121
Query: 519 IWDVRPFAPTERCVKLMSGHQH-NFEKNLLRCAW 617
+W+V +K +S + E L+ C W
Sbjct: 122 VWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLW 155
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 40.7 bits (91), Expect = 8e-04
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +3
Query: 192 NFVNSVS--GARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL 365
+ NSV A G +++A++D T++L+DA + F + V ++ + + +
Sbjct: 234 DITNSVDIYNAPSGSLRVMTANNDCTVRLFDATNFALLNRFAFHWSVNNISTSPDGKLVA 293
Query: 366 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAP 545
G + D + ++ ++GH D + +G L + + D T R+WDVR +
Sbjct: 294 VLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQ 353
Query: 546 TERCVK 563
+ + +K
Sbjct: 354 SLKVLK 359
Score = 33.5 bits (73), Expect = 0.12
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRG 227
++GH + P+G L TG D T +WDV +K LKG+ + ++ G
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 228 PELLVSASDDNTIKLWD 278
L A + + L+D
Sbjct: 375 -RFLAMAEPADFVHLFD 390
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 161
+W+V +++ V+KG+ GAI L F+ DG L + V ++D G
Sbjct: 345 LWDVRNLSQSLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTEAG 394
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H G + + S S +Y+G D V D +G I+K K V+S+ + G ++L
Sbjct: 115 HPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDG-KIL 173
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSGV-DNVIKMW 398
V+AS +K ++ + F + +P V V F + + +LSS V + I +W
Sbjct: 174 VTAS--TQLKTFNCSDLKKIQKF-TGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 233
K T + LC SPDG L T +T + ++ +I+K GH V V+ G
Sbjct: 155 KASTKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKY 212
Query: 234 LLVSASDDNTIKLW 275
+L SA + I +W
Sbjct: 213 VLSSAVGERYIAVW 226
Score = 35.9 bits (79), Expect = 0.022
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 2/143 (1%)
Frame = +3
Query: 102 SHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVSGARRGPELLVSASDDNTIKLWD 278
S L G V DV +G ++ H VN+VS + + + S D + D
Sbjct: 86 SVLVLGTGGGDVLALDVASGQLKWRISDCHPGGVNAVSSSAKA-SCIYSGGADGMVCQID 144
Query: 279 ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTG 458
N + F +S S L KIL + +K ++ + + K GH V
Sbjct: 145 PHSGNLIRKFKASTKTVSSLCVSPDGKILVTA-STQLKTFNCSDLKKIQKFTGHPGVVRC 203
Query: 459 LSLSWDGAYLLSNSM-DNTLRIW 524
++ + DG Y+LS+++ + + +W
Sbjct: 204 VAFTEDGKYVLSSAVGERYIAVW 226
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
++P + +++++ WD+ T + ++ V +V + +LVSA D++ I
Sbjct: 176 WNPHDVNSVAATSESSIQFWDLRTMKKNNSIE--RAHVRNVDYNLKREHILVSADDESGI 233
Query: 267 KLWDARK-RNPVASFDS-SYPVTSVLFN-DTAEKILSSGVDNVIKMW 398
LWD RK + PV ++ +V N + E ILS G D+ + +W
Sbjct: 234 HLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
Score = 33.9 bits (74), Expect = 0.087
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNT-VAVWDV-PTGTRIKKL 179
I W++ +N + + H + + ++ H+ A D + + +WD+ T +++L
Sbjct: 192 IQFWDLRTMKKNNSIERAH---VRNVDYNLKREHILVSADDESGIHLWDLRKTKFPVQEL 248
Query: 180 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
GH ++ +V EL++S D+ + LW A
Sbjct: 249 PGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFA 282
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 39.9 bits (89), Expect = 0.001
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Frame = +3
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-----YPVTSV 335
KKL+ H VN+VS G ++L+S SDD + LWD + N SF S + +
Sbjct: 53 KKLEKHKGCVNTVSFNAEG-DVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFM 111
Query: 336 LFNDTAEKILSSGVDNVIKMWDI-RNNQISLKIKG-HTDTVTGLSLSWDGAYLL-SNSMD 506
F+D I++ D +++ I +++ G H L + ++ + D
Sbjct: 112 PFSDD-RTIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPHIFYTCGED 170
Query: 507 NTLRIWDVRPFAPTE 551
++ +D+R APTE
Sbjct: 171 GLVQRFDLRTEAPTE 185
Score = 36.3 bits (80), Expect = 0.016
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
++ H G + + F+ +G L +G+ D V +WD G KL H+ N+V A+ P
Sbjct: 55 LEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGN--VKLSFHSGHANNVFQAKFMP 112
Query: 231 ELLVSASDDNTI 266
SDD TI
Sbjct: 113 -----FSDDRTI 119
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/66 (21%), Positives = 32/66 (48%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
F P ++ +G+ + +W G I+ ++ + VN + P +L S+ ++ I
Sbjct: 342 FGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHPHIP-VLASSGIESDI 400
Query: 267 KLWDAR 284
K+W ++
Sbjct: 401 KVWTSK 406
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +3
Query: 45 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 224
M+ G FS D L T NTV+V+ V TG +I L+ H V SV
Sbjct: 1 MIRGGRNNITSAPAFSKDAKKLLL-CTANTVSVYSVATGLKITSLEDHTAPVTSVIVDPS 59
Query: 225 GPELLV---SASDDNTIKLWDARKRNPVASFDSSYPVTSVL 338
E + ++S D I++W+ + FD+ P+ S++
Sbjct: 60 SDETVSYCWTSSLDGKIRIWEFSAPKLLKIFDTHLPIHSLV 100
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 167
E+ H+ + L FS DG+ LY+G VW++ TG +
Sbjct: 237 ESCTTFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGKK 280
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 39.9 bits (89), Expect = 0.001
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 32/200 (16%)
Frame = +3
Query: 27 GQCENVMVMKGHTGAIMQLCFSPD--GSHLYTGATDNTVAVW---DVPTGTRIKKLKGHA 191
G + + + GH G + ++ ++ GS L + + D V +W + T+ H
Sbjct: 44 GGSQQLATLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHK 103
Query: 192 NFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRN--PVASFDSSYPV--TSVLFN---- 344
+ VNS++ A L L S D I ++ AR + D ++PV TSV +
Sbjct: 104 SSVNSIAWAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATA 163
Query: 345 ----------DTAEKILSSGVDNVIKMWDIRNNQISL----KIKGHTDTVTGL----SLS 470
D K+ S G DN +K+W + N + ++ HTD V + +L
Sbjct: 164 PGALVSSGLLDPVYKLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLG 223
Query: 471 WDGAYLLSNSMDNTLRIWDV 530
+ + S S D + IW V
Sbjct: 224 LPKSTIASGSQDGKVIIWTV 243
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W++ ++V V+KG+ GAI + ++ DG ++ + V V+DV G ++
Sbjct: 345 VWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ---EI 401
Query: 192 NFVNSVSGARRGPE 233
+F +SG P+
Sbjct: 402 DFFGEISGISFSPD 415
Score = 32.7 bits (71), Expect = 0.20
Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 2/143 (1%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 269
SPDG L + + D TG ++ L GH +F + S + + D T +
Sbjct: 286 SPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDF-SFASAWHPDGVTFSTGNQDKTCR 344
Query: 270 LWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHT 443
+WD R + + + + S+ + + + + + + ++D+ N + +
Sbjct: 345 VWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFF 404
Query: 444 DTVTGLSLSWDGAYLLSNSMDNT 512
++G+S S D L D T
Sbjct: 405 GEISGISFSPDTEALFIGVWDRT 427
Score = 32.3 bits (70), Expect = 0.27
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +3
Query: 252 DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKI 431
D NT K + + SF S++ V F+ + D ++WDIRN S+ +
Sbjct: 305 DPNTGKTLETLSGHLDFSFASAWHPDGVTFS-------TGNQDKTCRVWDIRNLSQSVTV 357
Query: 432 -KGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTER 554
KG+ + + + DG Y+ + + ++DV TE+
Sbjct: 358 LKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ 399
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRG 227
+ GH + PDG TG D T VWD+ + LKG+ + S+ G
Sbjct: 315 LSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDG 374
Query: 228 PELLVSASDD 257
+ ++ D
Sbjct: 375 KYMAMAEPAD 384
Score = 31.1 bits (67), Expect = 0.62
Identities = 20/107 (18%), Positives = 44/107 (41%)
Frame = +3
Query: 243 SASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIS 422
++++D ++ +D + V F +PV + + + G + + D +
Sbjct: 253 ASNNDCGVRDFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTL 312
Query: 423 LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVK 563
+ GH D + DG + + D T R+WD+R + + +K
Sbjct: 313 ETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLK 359
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 12/132 (9%)
Frame = +3
Query: 117 GATDNTVAVWDVPTG-----TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 281
G D + +W+ + ++ L H V + + P L S +DD T+ +WD
Sbjct: 86 GLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL 145
Query: 282 RKRNPVASF---DSSY---PVTSVLFNDTAEKILSSGVDN-VIKMWDIRNNQISLKIKGH 440
+ + + SY ++S+ +N + +L+S N +WD+ N +I +K
Sbjct: 146 ANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLK-- 203
Query: 441 TDTVTGLSLSWD 476
TV L WD
Sbjct: 204 -TTVRCSVLQWD 214
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGH-ANFVNSVSGARR 224
++GH G + L ++ +GS L +G+ D + +W+ + + + GH AN +
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVD 380
EL+VS + D ++L++ + + A D++ + S L+ ++ V+
Sbjct: 106 SDELVVSGAGDAEVRLFNTSRLSGRAEDDNAI-IPSALYQCHTRRVKKLAVE 156
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 426 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+++GH V L+ + +G+ L+S S D + IW+
Sbjct: 45 ELEGHQGCVNALAWNSNGSLLISGSDDLRINIWN 78
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 39.1 bits (87), Expect = 0.002
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
IW+V Q + +G G I L +SP G + + D T +W+ T T + +
Sbjct: 239 IWDV-SQGAGTPIRRG-LGGISMLKWSPTGDYFFAARFDGTFCLWE--TNTWTSEPWSLS 294
Query: 192 NFVNSVSGARRGPE---LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKI 362
+ SV+GA PE +L+S S +T+ + P S D+ + V + A
Sbjct: 295 SGSGSVTGAIWDPEGRFILISFSKSSTLGSVHFSSKPP--SLDAH--LLPVELPEIASLT 350
Query: 363 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD 476
G++ + WD ++++ KG + GL +D
Sbjct: 351 GCEGIEKI--AWDASGERLAVSYKGGDENYKGLIAIYD 386
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +3
Query: 18 NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHAN 194
N G+ E V+ G + L F+P+GS L GA D T+ V+ P+ T + + + H++
Sbjct: 138 NQAGESEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSS 197
Query: 195 FVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 305
V ++ + G + LVS ++WD VAS
Sbjct: 198 -VKCLTFSESG-QFLVSLGGP-VCRVWDVNASAAVAS 231
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Frame = +3
Query: 81 LCFSP-DGSHLYTGATDNTVAVWDVPTG--------TRIKKLKGHANFV-NSVSGARRGP 230
LC +P + L+TG D + WD +G ++KG N G+ P
Sbjct: 217 LCATPGESGTLFTGGEDRAITAWDTNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLEDP 276
Query: 231 ELLVSASDDNTIKLWDAR 284
L+ SAS D I++WD R
Sbjct: 277 YLIGSASSDGIIRVWDVR 294
Score = 31.1 bits (67), Expect = 0.62
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +3
Query: 360 ILSSGVDNVIKMWDIRNNQISLKIK-GHTDTVTGLSL--------SWDGAYLL-SNSMDN 509
+ + G D I WD + +++ I+ H + G+ + S + YL+ S S D
Sbjct: 227 LFTGGEDRAITAWDTNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLEDPYLIGSASSDG 286
Query: 510 TLRIWDVR 533
+R+WDVR
Sbjct: 287 IIRVWDVR 294
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Frame = +3
Query: 114 TGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVS----GARRGPELLVSASDDNTIKLW 275
+G +D+T+ ++D+P+ + + L HA + ++S + P L+SA+ D ++ ++
Sbjct: 56 SGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLSFPRNLISAAADGSVAIF 115
Query: 276 D 278
D
Sbjct: 116 D 116
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 324 VTSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSN 497
VT + F + IL+ G D + + + LK + GH+ VT S + Y+ S+
Sbjct: 175 VTVLKFGHMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASS 234
Query: 498 SMDNTLRIWDV 530
S+D T+R+W++
Sbjct: 235 SLDKTIRVWEL 245
Score = 34.3 bits (75), Expect = 0.066
Identities = 26/135 (19%), Positives = 57/135 (42%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 230
+ GH+ + FS + ++ + + D T+ VW++ G I+ + G ++ R P
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYG----ISPQYCIRFHP 267
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 410
++N + +A K V +F + + +LF D + +I D +
Sbjct: 268 ------VNNNFLSAGNANKELTVFNFSTGRIIKKLLFEDEVTSMDHDHTGQIIFCGDGQG 321
Query: 411 NQISLKIKGHTDTVT 455
S+ + HT +++
Sbjct: 322 TVYSVSMDSHTGSLS 336
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +3
Query: 171 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY 320
KKL H VN+VS G ++L+S SDD + LWD + + SFDS +
Sbjct: 49 KKLDKHKGCVNTVSFNADG-DILLSGSDDRQVILWDWQTASVKLSFDSGH 97
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H G + + F+ DG L +G+ D V +WD T + KL + N++ A+ P
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTAS--VKLSFDSGHFNNIFQAKFMP--- 108
Query: 240 VSASDDNTI 266
SDD TI
Sbjct: 109 --FSDDRTI 115
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
F P ++ +G+ + +W G ++ ++ + VN + P L+ S+ D I
Sbjct: 318 FGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMP-LMCSSGIDTDI 376
Query: 267 KLW 275
K+W
Sbjct: 377 KIW 379
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 402 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWD 527
+R + K+ H V +S + DG LLS S D + +WD
Sbjct: 42 LRRLGLDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWD 83
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL-SSGVDNVIKMWDIR 407
E +VS SD I +W + + + ++ V + + + ++ SSG+D IK+W
Sbjct: 323 EYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDIKIWTPG 382
Query: 408 NNQISLKIKGHTDTVTGL-SLSWDGAYLLSNSMDN 509
+ L G+ +G + W Y + + D+
Sbjct: 383 GTEKPLS-PGNAKQASGFGNPRWFDGYYVDDDDDS 416
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 285 KRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 461
K NPVA + + S+ F++ + + G D ++++D ++ K + +
Sbjct: 292 KSNPVARWHICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCC 351
Query: 462 SLSWDGAYLLSNSMDNTLRIWDV 530
S S DG Y+L+ D+ +++W +
Sbjct: 352 SWSMDGKYILTGGEDDLVQVWSM 374
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 212
K + GA++ +S DG ++ TG D+ V VW + + +GH ++V+ V+
Sbjct: 342 KSYYGALLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/90 (20%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 198 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 374
+NS++ + G L + D ++++D + V S Y + ++ + IL+ G
Sbjct: 306 INSIAFSNDGAHL-ATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
Query: 375 VDNVIKMWDIRNNQISLKIKGHTDTVTGLS 464
D+++++W + + ++ +GH V+G++
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
+W++ ++V V++G+ GAI + ++ DG ++ + V V+DV G ++
Sbjct: 343 VWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ---EI 399
Query: 192 NFVNSVSGARRGPE---LLVSASDDNTIKLWDARKRNPVASFDS 314
+F +SG P+ L + D L + +R+ + DS
Sbjct: 400 DFFGEISGISFSPDTEALFIGVWDRTYGSLIEYSRRHNYSYLDS 443
Score = 32.7 bits (71), Expect = 0.20
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVW-DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 266
SPDG L T DN ++ D TG + L GH +F + S + + D T
Sbjct: 284 SPDGK-LLTIVGDNPESLLVDPNTGKTLATLSGHLDF-SFASAWHPDGFTFSTGNQDKTC 341
Query: 267 KLWDARK-RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGH 440
++WD R VA + + S+ + + + + + + ++D+ N + +
Sbjct: 342 RVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDF 401
Query: 441 TDTVTGLSLSWDGAYLLSNSMDNT 512
++G+S S D L D T
Sbjct: 402 FGEISGISFSPDTEALFIGVWDRT 425
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/97 (19%), Positives = 40/97 (41%)
Frame = +3
Query: 243 SASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIS 422
++++D ++ +D + V F +PV + + + G + + D +
Sbjct: 251 ASNNDCGVRDFDMERYQLVNQFRFPWPVNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTL 310
Query: 423 LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+ GH D + DG + + D T R+WD+R
Sbjct: 311 ATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIR 347
Score = 31.9 bits (69), Expect = 0.35
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVS 212
+ + + GH + PDG TG D T VWD+ ++ + L+G+ + S+
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIR 367
Query: 213 GARRGPELLVSASDD 257
G + ++ D
Sbjct: 368 YTSDGKYMAMAEPAD 382
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/116 (20%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 182
Q+ ++++ Q V+ AI + PDG +Y G +A +D+ TG +
Sbjct: 239 QVRLYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRTGKLLGSFL 298
Query: 183 GHANFVNSVSGARRGP--ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN 344
G + S+ R P +++ S D ++++D + R +++ +T ++F+
Sbjct: 299 GKCS--GSIRSVVRHPQHQVIASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVFD 352
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
IW+ E+V V+KG+ GA+ + F+ DG ++ + V ++D +G K +
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG---YKKEQEI 401
Query: 192 NFVNSVSGARRGPE 233
+F +SG P+
Sbjct: 402 DFFGEISGISFSPD 415
Score = 37.1 bits (82), Expect = 0.009
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 2/143 (1%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 269
SPDG + D + D G I LKGH ++ + S + + D T +
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDY-SFASAWHPNGVTFATGNQDKTCR 344
Query: 270 LWDARK-RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHT 443
+WD RK VA + V S+ F + + + + ++D ++ +
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFF 404
Query: 444 DTVTGLSLSWDGAYLLSNSMDNT 512
++G+S S D L D T
Sbjct: 405 GEISGISFSPDTESLFIGVWDRT 427
Score = 36.3 bits (80), Expect = 0.016
Identities = 24/108 (22%), Positives = 46/108 (42%)
Frame = +3
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQI 419
+++++D ++ +D + V F +PV + + + G D + D N Q
Sbjct: 252 MASNNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQT 311
Query: 420 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVK 563
+KGH D + +G + + D T RIWD R + + +K
Sbjct: 312 IGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLK 359
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIKKLKGHANFVNSVS 212
+ + +KGH + P+G TG D T +WD + LKG+ V S+
Sbjct: 310 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 369
Query: 213 GARRGPELLVSASDDNTIKLWDAR 284
G + A + + ++D +
Sbjct: 370 FTSDG-RYVAMAEPADFVHIYDTK 392
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +3
Query: 12 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 191
IW+ E+V V+KG+ GA+ + F+ DG ++ + V ++D +G K +
Sbjct: 339 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG---YKKEQEI 395
Query: 192 NFVNSVSGARRGPE 233
+F +SG P+
Sbjct: 396 DFFGEISGISFSPD 409
Score = 37.1 bits (82), Expect = 0.009
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 2/143 (1%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 269
SPDG + D + D G I LKGH ++ + S + + D T +
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDY-SFASAWHPNGVTFATGNQDKTCR 338
Query: 270 LWDARK-RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHT 443
+WD RK VA + V S+ F + + + + ++D ++ +
Sbjct: 339 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFF 398
Query: 444 DTVTGLSLSWDGAYLLSNSMDNT 512
++G+S S D L D T
Sbjct: 399 GEISGISFSPDTESLFIGVWDRT 421
Score = 36.3 bits (80), Expect = 0.016
Identities = 24/108 (22%), Positives = 46/108 (42%)
Frame = +3
Query: 240 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQI 419
+++++D ++ +D + V F +PV + + + G D + D N Q
Sbjct: 246 MASNNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQT 305
Query: 420 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVK 563
+KGH D + +G + + D T RIWD R + + +K
Sbjct: 306 IGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLK 353
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIKKLKGHANFVNSVS 212
+ + +KGH + P+G TG D T +WD + LKG+ V S+
Sbjct: 304 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 363
Query: 213 GARRGPELLVSASDDNTIKLWDAR 284
G + A + + ++D +
Sbjct: 364 FTSDG-RYVAMAEPADFVHIYDTK 386
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 37.9 bits (84), Expect = 0.005
Identities = 38/179 (21%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-----PTGTRIKKLKGHANFVNSVSGA 218
+ H G I L S DG T + D+ V ++DV R+ + G +V
Sbjct: 110 RSHLGPIEGLAVSIDGLLCCTISNDHAVKIYDVVNYDMMAMIRLPYIPGAVEWVYKQGDV 169
Query: 219 RRGPELLVSASDDNTIKLWDAR--KRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVI 389
+ +L VS D + ++D R P+AS + P+ + +N ++ ++S +I
Sbjct: 170 K--AKLAVSDRDSLFVHIYDPRSGSNEPIASKEIHMNPIKVMKYNPVSDTMISGDTKGII 227
Query: 390 KMW-----DIRNNQISLKIKGHTD---------TVTGLSLSWDGAYLLSNSMDNTLRIW 524
+ W ++++ K+K T+ T++ + +S DG + D +R++
Sbjct: 228 EYWSATTLQFPEDEVNFKLKSDTNLFEIIKCKTTISAIEVSPDGKQFSITAPDRRIRVF 286
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +3
Query: 87 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS---VSGARRGPELLV---SA 248
FS D L T NTV+V+ TG +I L+GH V + V + ++L +A
Sbjct: 15 FSNDAKKLLV-CTGNTVSVFSAATGLQITSLEGHTAPVTTLIVVPASSPAQKILCYCWTA 73
Query: 249 SDDNTIKLWDARKRNPVASFDSSYPVTSVL 338
S D TI+ WD + + D+ P+ S++
Sbjct: 74 SLDGTIRHWDFSGPELLKTIDAQLPIYSMV 103
Score = 35.9 bits (79), Expect = 0.022
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 167
H+ + L FS DG++LY+G + + VW + TG +
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGKK 317
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 438 HTDTVTGLSLSWDGAYLLSNSMDNTLRIWDV 530
H+ V L+ S DGAYL S + L +W +
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQL 312
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 288 RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL 467
R A D YPV S+ F+ + G D + +WD N + + + +++ LS
Sbjct: 232 RKSEAGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSF 291
Query: 468 SWDGAYL 488
S DG L
Sbjct: 292 SRDGQLL 298
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 251
+ + F P TG D V +WD R+ + + ++++S +R G L V++S
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASS 303
Score = 27.9 bits (59), Expect = 5.7
Identities = 35/166 (21%), Positives = 70/166 (42%), Gaps = 5/166 (3%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL-VSA 248
I L FS + HL + D V ++DV T + LKG +V + S
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNS----LKGEFLHGGAVLDCCFHDDFSGFSV 75
Query: 249 SDDNTIK--LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR--NNQ 416
D ++ +++ K + + + D + V V ++ A ++++ D +K WD R +
Sbjct: 76 GADYKVRRIVFNVGKEDILGTHDKA--VRCVEYSYAAGQVITGSWDKTVKCWDPRGASGP 133
Query: 417 ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTER 554
++ + S+S G L+ + + I+D+R + E+
Sbjct: 134 ERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQPEQ 179
Score = 27.5 bits (58), Expect = 7.6
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H GA++ CF D S GA D V G + L H V V + + +
Sbjct: 57 HGGAVLDCCFHDDFSGFSVGA-DYKVRRIVFNVG-KEDILGTHDKAVRCVEYSYAAGQ-V 113
Query: 240 VSASDDNTIKLWDAR 284
++ S D T+K WD R
Sbjct: 114 ITGSWDKTVKCWDPR 128
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 37.5 bits (83), Expect = 0.007
Identities = 33/155 (21%), Positives = 68/155 (43%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 248
A+ +L FSP ++L + D+ + ++DV + + +L A ++ ++
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF---ENESTSFTS 71
Query: 249 SDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLK 428
D I+ +D TS++++ +++S+G D IK WD R + SL
Sbjct: 72 GSDGFIRRYDLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRE-SLV 130
Query: 429 IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
G ++ G L+ +D ++ I+D+R
Sbjct: 131 FSTDAGGAVG-CVTVSGNNLVV-CVDASMHIYDLR 163
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 37.5 bits (83), Expect = 0.007
Identities = 33/155 (21%), Positives = 68/155 (43%)
Frame = +3
Query: 69 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 248
A+ +L FSP ++L + D+ + ++DV + + +L A ++ ++
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF---ENESTSFTS 71
Query: 249 SDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLK 428
D I+ +D TS++++ +++S+G D IK WD R + SL
Sbjct: 72 GSDGFIRRYDLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRE-SLV 130
Query: 429 IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
G ++ G L+ +D ++ I+D+R
Sbjct: 131 FSTDAGGAVG-CVTVSGNNLVV-CVDASMHIYDLR 163
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 37.5 bits (83), Expect = 0.007
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Frame = +3
Query: 231 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS---GVDNVIKMWD 401
+L VSA DD +K+W A + + S V++V + + + GV VI++
Sbjct: 76 KLFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAVAISSDDSHVCYADKFGVVWVIELDG 135
Query: 402 IRNNQI------SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVK 563
I + + +L + + +T L S DG Y+LS D +R+ V P P E +
Sbjct: 136 INDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRV-TVFPKKPLEGAHE 194
Query: 564 LMS 572
+ S
Sbjct: 195 IQS 197
Score = 33.1 bits (72), Expect = 0.15
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-----GTRIKKL-KGHANF 197
+ +++ + I L FSPDG ++ + D + V P I+ GH+ F
Sbjct: 146 KGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEF 205
Query: 198 VNSVSGARRGPEL----LVSASDDNTIKLWD 278
+ + PEL L+S S D+T++LWD
Sbjct: 206 ITCTAFVST-PELTQGYLMSGSGDSTVRLWD 235
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 483 YLLSNSMDNTLRIWDVRPFAPTERC-VKLMSGHQHNFE 593
YL+S S D+T+R+WD+ + + C V ++GH + E
Sbjct: 221 YLMSGSGDSTVRLWDITSGSLLDTCEVSTVAGHAESNE 258
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 37.1 bits (82), Expect = 0.009
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Frame = +3
Query: 66 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 245
G++ L FS DG HL + D V VWD+ T + K + + + L S
Sbjct: 375 GSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFAS 434
Query: 246 ASDDNTIKLWD-----ARKRNPVASFDS-SYPVTSVLFNDTAE--KILSSGVDNVIKM 395
+D + ++ KR P+ + D+ + + + FN A+ I+S+ N +K+
Sbjct: 435 GTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILAIVSTMNKNSVKL 492
Score = 34.7 bits (76), Expect = 0.050
Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 3/164 (1%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGT--RIKKLKGHANFVNSVSGARRGPELLVS 245
I + F P+GS + +D+ +I L G + +
Sbjct: 291 IRKAAFLPNGSQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAF 350
Query: 246 ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 425
++ I L + + + + + V S+ F++ + +LSSG D + +WD+R +
Sbjct: 351 VGNEGYILLVSTKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLY 410
Query: 426 KIKGHTDTV-TGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTER 554
K T T L S +GA S + + I+ F +R
Sbjct: 411 KGVDEGSTCGTSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKR 454
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +3
Query: 66 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 245
G I +CF+ + + G T V+ WD+ R+ + + N V S+ R ++V+
Sbjct: 304 GGIQTICFNQGTNLAFIGTTGGYVSCWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVA 363
Query: 246 ASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFN 344
D +++ D + ++ D + TS N
Sbjct: 364 GGIDGVLRMIDQKSGRVLSRVIMDDKFSTTSTRNN 398
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 36.7 bits (81), Expect = 0.012
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Frame = +3
Query: 66 GAIMQLCFSP-DGSHLYTGATDNTVAVW----DVPTGTRIKKLKG--HANFVNSVSGARR 224
G I + F P + + TG +D+ V +W D + K L H+ V V G +
Sbjct: 297 GIINNIKFMPWENTCFVTGGSDHAVVLWNESDDEENKWKSKPLHRNLHSAAVMGVDGMKN 356
Query: 225 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN--DTAEKILSSGV-DNVIKM 395
+++S D I +D + Y SVL N D ++ SG + +++
Sbjct: 357 -KNVILSVGADKRIYGFDVQVGRADYKHQIDYKCMSVLANPCDFNLFMVQSGEPEKQLRL 415
Query: 396 WDIRNNQISLKIKG----HTDTVTGL-SLSW--DGAYLLSNSMDNTLRIWDVR 533
+DIR + L G +++ + L + SW DG Y+ S S+D + ++D+R
Sbjct: 416 FDIRLRKTELHSFGWKQDSSESQSALINQSWSPDGLYITSGSVDPVIHVFDIR 468
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 36.7 bits (81), Expect = 0.012
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 72 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 188
+ LC+ PDG + G D T+++ DV G ++ LK H
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPH 105
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 36.3 bits (80), Expect = 0.016
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 309 DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYL 488
D YPV ++ F+ S G D + +WD N + + + ++ LS S DG L
Sbjct: 238 DIVYPVNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLL 297
Score = 35.1 bits (77), Expect = 0.038
Identities = 28/119 (23%), Positives = 52/119 (43%)
Frame = +3
Query: 198 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV 377
++++ + LLVS S D +++L+DA F V F+D + S
Sbjct: 19 ISNLRFSNNSDHLLVS-SWDKSVRLYDANGDLMRGEFKHGGAVLDCCFHDDSSGF-SVCA 76
Query: 378 DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTER 554
D ++ D + + + H V + S+ +++ S D T++ WD R + TER
Sbjct: 77 DTKVRRIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTER 134
Score = 31.5 bits (68), Expect = 0.47
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +3
Query: 60 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 239
H GA++ CF D S ++ D V D G + L H V V + + +
Sbjct: 56 HGGAVLDCCFHDDSSG-FSVCADTKVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQ-V 112
Query: 240 VSASDDNTIKLWDAR-----KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 404
++ S D TIK WD R +R + ++ V S+ +++ + + ++D+
Sbjct: 113 ITGSWDKTIKCWDPRGASGTERTQIGTYMQPERVNSLSL--VGNRLVVATAGRHVNIYDL 170
Query: 405 RN 410
RN
Sbjct: 171 RN 172
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 35.9 bits (79), Expect = 0.022
Identities = 27/145 (18%), Positives = 61/145 (42%), Gaps = 7/145 (4%)
Frame = +3
Query: 63 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK------GHANFVNSVSGARR 224
+G + + +SPD +++G++D + WD + + ++ G ++ + S
Sbjct: 198 SGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSL 257
Query: 225 GPELLVSASDDNTIKLWDARKRNPV-ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 401
+LVS T++ WD+ + A + V ++ + ++ S+G D + ++
Sbjct: 258 RCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILY- 316
Query: 402 IRNNQISLKIKGHTDTVTGLSLSWD 476
++S G D S WD
Sbjct: 317 ----KLSGSTNGSQDLKPSSSQKWD 337
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 35.5 bits (78), Expect = 0.029
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 324 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD--GAYLLSN 497
+ V FN + + D +WD I+ +I+ + + S+SW G LL +
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 498 SMDNTLRIWDV 530
+ D +L +WDV
Sbjct: 86 AADKSLTLWDV 96
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 VNSVSGARRGPELLVSASDDNTIKLWDARKRN---PVASFDSSYPVTSVLFNDTAEKILS 368
+ V+ RG L +D + +WD R + D S +TSV ++ ++L
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCV-IWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLV 84
Query: 369 SGVDNVIKMWDIRNNQ 416
S D + +WD+ +
Sbjct: 85 SAADKSLTLWDVSTGE 100
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 450 VTGLSLSWDGAYLLSNSMDNTLRIWD 527
V + S +G YLL+NS D T+RI++
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYE 244
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 35.1 bits (77), Expect = 0.038
Identities = 32/147 (21%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Frame = +3
Query: 114 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR-KR 290
T +TD T +WD+ +L H V + A G + S S D +++++D R K
Sbjct: 153 TSSTDTTCTIWDIEREAVDTQLIAHDKEVFDI--AWGGVGVFASVSADGSVRVFDLRDKE 210
Query: 291 NPVASFDSSYPVTSVL---FNDTAEKILSSGVDNVIK--MWDIRNNQIS-LKIKGHTDTV 452
+ ++SS P T ++ +N + +++ + + K + DIR + ++++ H +V
Sbjct: 211 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPALPVVELQRHQASV 270
Query: 453 TGLSLS-WDGAYLLSNSMDNTLRIWDV 530
++ + ++ + D+ IWD+
Sbjct: 271 NAIAWAPHSSCHICTAGDDSQALIWDI 297
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 36 ENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRI 170
E + V+ G G + + FS DG++LYTG D + WD+ I
Sbjct: 246 ELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEI 291
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 34.7 bits (76), Expect = 0.050
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +3
Query: 264 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDN-VIKMWDIRNNQISLKIKGH 440
I ++D + VASF S P+ + + +L+ G+D+ I + + + ++ K++GH
Sbjct: 452 IAVFDLKNFEKVASFGSPTPMATYFIFIPGD-LLAVGLDDGSIFIHCLSSRKVKEKLEGH 510
Query: 441 TDTVTGLSLSWDGAYLLSNSMDNTLRIWDVR 533
+T L+ S L+S+ D L +W +
Sbjct: 511 DQKITCLAFSRCFNVLVSSDSDGKLCLWSTK 541
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 34.3 bits (75), Expect = 0.066
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Frame = +3
Query: 234 LLVSASDDNTIKLWDARK---RNPVASFDSSYPVTS--VLFNDTAEKILSSGVDN----- 383
+LV+ S D ++K+W + K +N V + SS+ + V N LS V N
Sbjct: 344 VLVTGSCDGSVKIWMSNKEDLQNSVEVYKSSFFLLKEVVAVNPVQVSTLSFVVSNHYNAM 403
Query: 384 ---------VIKMW----DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
++W R + + H VTGL+ S+DG L S S DN +R W
Sbjct: 404 HLAIGKGSGSFEVWKCEISTRKFEQIVSTNAHNQVVTGLAWSYDGRCLYSCSQDNYVRSW 463
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 34.3 bits (75), Expect = 0.066
Identities = 20/78 (25%), Positives = 41/78 (52%)
Frame = +3
Query: 387 IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCVKL 566
I +W++ + +++ H+ TVT L S+D LLS S D ++ ++ E KL
Sbjct: 629 IWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKL 688
Query: 567 MSGHQHNFEKNLLRCAWS 620
M+ + + ++ + C+W+
Sbjct: 689 MAKVEAH-KRIIWACSWN 705
Score = 32.7 bits (71), Expect = 0.20
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Frame = +3
Query: 228 PELLVSASDDNTIKLWDARKR-----NPVASFDSSYPVTSVL---FNDTAEKILSSGVDN 383
P ++SAS D T+ +W K+ N V + S+ ++ + IL+ G
Sbjct: 329 PLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGHWSPNSLSILAHGYGG 388
Query: 384 VIKMW-------DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
+W + N Q+ GH VT ++ + G YLLS S D T R++
Sbjct: 389 AFHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVF 442
Score = 31.9 bits (69), Expect = 0.35
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 51 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 212
++ H I ++P G T + D TV +W V RIK++ F +SV+
Sbjct: 692 VEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSVT 745
Score = 29.9 bits (64), Expect = 1.4
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 36/179 (20%)
Frame = +3
Query: 96 DGSHLYTGATDNTVAVWDVPTGTRIKKLK-------GHANFVNSVSG--ARRGPELLVSA 248
D +L +G +D + +W++ T ++ + H V ++ + SA
Sbjct: 81 DRQYLLSGDSDGIIILWELSTLNNDQQWRHVLQLPLSHKKGVTCITAYMVSETDAMFASA 140
Query: 249 SDDNTIKLWDAR------KRNPVASFDSSYPVTSVLFN-DTAE--------KILSSGVDN 383
S D + +WD + V DS T + AE + G+DN
Sbjct: 141 SSDGVVNVWDVSFPSQPSEECKVVCLDSICVDTKAIVTLSLAELPQNPGRFALALGGLDN 200
Query: 384 VIKMWD-IRNNQIS--LKIKGHTDTVTGLSLSW---------DGAYLLSNSMDNTLRIW 524
IK++ R + + ++KGHTD + L S + L+S+S D +RIW
Sbjct: 201 KIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIW 259
Score = 27.9 bits (59), Expect = 5.7
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Frame = +3
Query: 63 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVP-TG--TRIKKLKGHANFVNSVSGA----- 218
T ++ +L +P L G DN + ++ TG T + +LKGH +++ S+ +
Sbjct: 178 TLSLAELPQNPGRFALALGGLDNKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHT 237
Query: 219 -RRGPE--LLVSASDDNTIKLWDARKRNPVASFD-----SSYPVTSVLFNDTAEKILSSG 374
P +LVS+S D I++W V S+ +SY V + T +S
Sbjct: 238 TEEIPNSIMLVSSSQDKVIRIWKLVLVGDVGSWRREITLASYIEGPVFVSGTFTYQIS-- 295
Query: 375 VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
V++V+ + + + D + G ++ +LS SMD T+ IW
Sbjct: 296 VESVLIGHEDWVYSVEWQ-PPVIDFIDGRLVNHQPLSILSASMDKTMMIW 344
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 33.9 bits (74), Expect = 0.087
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Frame = +3
Query: 207 VSGARRGPELLVSASDDN--TIKLWDARKRNP-VASFDSSYPVTSVLFNDTAEKILSSGV 377
V G G +VS +D N T++ W ASFD + P ++ +G
Sbjct: 135 VVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNP-----------NLVYTGS 183
Query: 378 DNV-IKMWDIRN----NQISLKIKGHTDTVTGLSLSWDGAY-LLSNSMDNTLRIWDVR 533
D+ WDIR+ N++ K HT V +S + Y + + S D TLR+WD R
Sbjct: 184 DDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWDTR 241
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Frame = +3
Query: 75 MQLC--FSPDGSHLYTGATDNTVAVWDVPTGT--RIKKLKGHANFVNSVSGARRGPELLV 242
M LC + P + + G +D + +V +++ KGH + + S P L+
Sbjct: 121 MCLCLDWDPSSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNLVY 180
Query: 243 SASDDNTIKLWDARKRNPVAS--FDSS----YPVTSVLFNDT-AEKILSSGVDNVIKMWD 401
+ SDD WD R +P + F +S V + N + I + D +++WD
Sbjct: 181 TGSDDCKFSCWDIRD-SPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWD 239
Query: 402 IRN 410
R+
Sbjct: 240 TRS 242
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 33.9 bits (74), Expect = 0.087
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 312 SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTV 452
S PVTSV FN +L+ D + +WD++ I+ I HT V
Sbjct: 477 SQSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHTAPV 523
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +3
Query: 30 QCENVMVMKGHTGA-----IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 188
Q E+ M+ G G + +CF+ GS L G D V VWD+ + K + H
Sbjct: 462 QMESKMIWLGLQGERSQSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEH 519
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 33.9 bits (74), Expect = 0.087
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +3
Query: 237 LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK----ILSSG--VDNVIK 392
LVS+S D T+K+W RK P+ PV S +F + E+ IL +G ++ IK
Sbjct: 356 LVSSSVDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIK 415
Query: 393 MW 398
+W
Sbjct: 416 IW 417
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 33.9 bits (74), Expect = 0.087
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 261 TIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIR 407
T+ +W + P+ PV+SV F+ + +SG + IK+WD+R
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLR 311
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +3
Query: 6 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 185
+ +W Q V M+ H G + + F P+G + T + + +WD+ ++ +
Sbjct: 263 VTMWKPTSQAPLVQ-MQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI-- 319
Query: 186 HANFVNSVSGARRG 227
H+ ++S +++G
Sbjct: 320 HSFHAKTLSFSQKG 333
Score = 31.1 bits (67), Expect = 0.62
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = +3
Query: 234 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDN-VIKMWDIRN 410
LL S + + D VAS + T V+ + ++ G + MW +
Sbjct: 211 LLASVNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTS 270
Query: 411 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPF 539
++++ H V+ ++ +G + ++ + ++IWD+R F
Sbjct: 271 QAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKF 313
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.9 bits (74), Expect = 0.087
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 57 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
GH + L SPD + L TG+ D+TV +W +
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
Score = 33.5 bits (73), Expect = 0.12
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 327 TSVLFNDTAEKILSSG-VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 503
+SV+ + +I++ G DN IK+ + GH VT L+LS D +L++ S
Sbjct: 2629 SSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSR 2688
Query: 504 DNTLRIWDV 530
D+T+ +W +
Sbjct: 2689 DSTVLLWRI 2697
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 33.9 bits (74), Expect = 0.087
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = +3
Query: 378 DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERC 557
+N + + + ++ I+ H D V+ ++++ D L + S D T+ +WD+ E+
Sbjct: 1025 ENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEKR 1084
Query: 558 VK 563
V+
Sbjct: 1085 VR 1086
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 152
V ++ H + + + D + L TG+ D TV VWD+
Sbjct: 1039 VQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Frame = +3
Query: 237 LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK----ILSSG--VDNVIK 392
LVS+S D TIK+W RK P+ +PV+S F + E+ IL +G ++ +K
Sbjct: 337 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 396
Query: 393 MW 398
+W
Sbjct: 397 IW 398
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Frame = +3
Query: 237 LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK----ILSSG--VDNVIK 392
LVS+S D TIK+W RK P+ +PV+S F + E+ IL +G ++ +K
Sbjct: 372 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 431
Query: 393 MW 398
+W
Sbjct: 432 IW 433
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 227
V H ++ + DG+ ++TG D +W + +G + + H N ++ G
Sbjct: 68 VSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWI-PG 126
Query: 228 PELLVSASDDNTIK 269
LLV+ S D T+K
Sbjct: 127 MNLLVTGSWDKTLK 140
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 102 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG-ARRGPELLVSASDDNTIKLWD 278
+H+ G+ + +++ +G+ ++ + GH V V R +LL+S+S + ++LWD
Sbjct: 1442 NHIAVGSHAGEIKIFEASSGSMLESVSGHQAPVTLVQPYVSRDTQLLLSSSSSD-VQLWD 1500
Query: 279 ARK--RNPVASFD 311
A P SFD
Sbjct: 1501 ASSITGGPRHSFD 1513
>At5g11560.1 68418.m01348 PQQ enzyme repeat-containing protein
contains Pfam profile PF01011: PQQ enzyme repeat
Length = 978
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 354 EKILSSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSMD-NTLRIWD 527
++++ S +NV+ D+R+ +I + + G D + G+ ++ G Y+++ S + +TLR W+
Sbjct: 53 KRVIVSTEENVVASLDLRHGEIFWRHVLGTKDAIDGVGIAL-GKYVITLSSEGSTLRAWN 111
Query: 528 VRPFAPTERCVKLMSGHQHNFEKNLL 605
+ P + V S H K+LL
Sbjct: 112 L----PDGQMVWETSLHTAQHSKSLL 133
>At5g54730.1 68418.m06815 expressed protein
Length = 763
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 354 EKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD-NTLRIWDV 530
EK+ + ++ + DI N + + K H ++ L G L++ S+ + + ++ +
Sbjct: 318 EKVADAESIGMVIVKDITNKSVITQFKAHKSPISALCFDQSGLLLVTASIQGHNINVFRI 377
Query: 531 RPFAPTERCVK 563
P T R VK
Sbjct: 378 MPTISTSRAVK 388
>At5g51660.1 68418.m06405 cleavage and polyadenylation specificity
factor (CPSF) A subunit C-terminal domain-containing
protein similar to SP|Q9EPU4 Cleavage and polyadenylation
specificity factor, 160 kDa subunit (CPSF 160 kDa
subunit) {Mus musculus}; contains Pfam profile PF03178:
CPSF A subunit region
Length = 1442
Score = 31.5 bits (68), Expect = 0.47
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 147 DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPV 326
+V T ++LKG + V S+ G LL+S+ + W+ + N VA FD+ P+
Sbjct: 1163 NVVTEVYSRELKGAISAVASIQG-----HLLISSGPKIILHKWNGTELNGVAFFDAP-PL 1216
Query: 327 TSVLFNDTAEKILSSGVDNVIKM--WDIRNNQISLKIK 434
V N IL V I W + +Q+SL K
Sbjct: 1217 YVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAK 1254
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 30.7 bits (66), Expect = 0.81
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Frame = +3
Query: 30 QCENVM-VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT--GTRIKKLKGH---A 191
+C++V ++ T + LCF ++ + N + +DV T T K L+ +
Sbjct: 46 RCKDVQFIIDVGTEPVSSLCFKTGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNK 105
Query: 192 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAE-KI 362
+ VN V R L SA D +K+ D ++ + + + +SV F ++
Sbjct: 106 DEVNQVVCNGRS-SFLASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEV 164
Query: 363 LSSGVDNVIKMWDIRNNQISLKIKGHTDT 449
++ G+D+ + +WD + I +DT
Sbjct: 165 ITGGLDSKLVLWDFSKGRSQKIIDFGSDT 193
>At2g32160.2 68415.m03931 expressed protein
Length = 449
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 310 TVHTQSQVYSSMIQLRKFYPVVWTMSSKCGI 402
T+ T + ++YPV WTM KC I
Sbjct: 416 TIETTYSTNPRSMMKNRYYPVFWTMRKKCAI 446
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 90 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 269
+PDG G + +W +P K H V ++ R L ++ S D +K
Sbjct: 2350 NPDGGSSTDGDQNKNGMLWYIP--------KAHLGSVTKIATIPR-TSLFLTGSKDGEVK 2400
Query: 270 LWDAR 284
LWDA+
Sbjct: 2401 LWDAK 2405
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 48 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 149
+ K H G++ ++ P S TG+ D V +WD
Sbjct: 2370 IPKAHLGSVTKIATIPRTSLFLTGSKDGEVKLWD 2403
>At1g15960.1 68414.m01915 NRAMP metal ion transporter 6, putative
(NRAMP6) identical to putative metal transporter
[Arabidopsis thaliana] gi|12666983|emb|CAC28123; similar
to NRAMP1 protein [Arabidopsis thaliana]
gi|7108911|gb|AAF36535; member of the natural
resistance-associated macrophage protein (NRAMP) metal
transporter family, PMID:11500563; contains a possible
frameshift
Length = 301
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 381 NVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIWDVRPFAPTERCV 560
NV+ W + I+L G + T+TG ++ G Y++ +D L W +R F RC+
Sbjct: 86 NVVGKWSSKLFAIALLASGQSSTITG---TYAGQYVMQGFLDLRLEPW-LRNF--LTRCL 139
Query: 561 KLM 569
++
Sbjct: 140 AII 142
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 42 VMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 152
V K HT I LCF P G+ L T + N + V+ +
Sbjct: 371 VSQFKAHTSPISALCFDPSGTLLVTASVCGNNINVFQI 408
>At1g80830.1 68414.m09483 NRAMP metal ion transporter 1 (NRAMP1)
identical to NRAMP1 protein [Arabidopsis thaliana]
gi|7108911|gb|AAF36535; member of the natural
resistance-associated macrophage protein (NRAMP) metal
transporter family, PMID:11500563
Length = 532
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 381 NVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRIW 524
NV+ W + I+L G + T+TG ++ G Y++ +D L W
Sbjct: 320 NVVGKWSSKLFAIALLASGQSSTITG---TYAGQYVMQGFLDLRLEPW 364
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 54 KGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV-PTGTR 167
+ HT I LCF P G+ L T + N + V+ + PT T+
Sbjct: 378 RAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPTPTK 417
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 158
+++I ++ V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 244 KVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 158
+++I ++ V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 244 KVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,659,676
Number of Sequences: 28952
Number of extensions: 314660
Number of successful extensions: 2562
Number of sequences better than 10.0: 261
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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