Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31439
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   5.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   5.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 117 ERSGVFGGRYCEHDRGHNTGK 179
           E+SG+F  +  EH     +GK
Sbjct: 155 EKSGLFSSKTSEHSVDELSGK 175


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 75  RMERYPSKDGYYTAERSGVFGG 140
           ++  Y S   + + ER+G+ GG
Sbjct: 182 KLVAYTSAQSHSSVERAGLLGG 203


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +1

Query: 145 IVNMIEDTIQEKEAEK 192
           ++N+ + T+QE+E +K
Sbjct: 242 LINVFKTTLQEREKKK 257


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 306 TFFISPNRFLRELFYNS 256
           TF+ +   FLREL  NS
Sbjct: 29  TFYSNKEIFLRELISNS 45


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 58   NPNEDTEWNDTLRK 99
            N NE+T WN+ + +
Sbjct: 1189 NRNEETFWNELIEQ 1202


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 58   NPNEDTEWNDTLRK 99
            N NE+T WN+ + +
Sbjct: 1189 NRNEETFWNELIEQ 1202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,426
Number of Sequences: 336
Number of extensions: 1249
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)