Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31439
         (370 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034431-1|AAH34431.1|  250|Homo sapiens PDCL2 protein protein.        45   9e-05
BC001021-1|AAH01021.1|  239|Homo sapiens phosducin-like 3 protein.     44   2e-04
AF267853-1|AAG44722.1|  239|Homo sapiens HTPHLP protein.               44   2e-04
AF110511-1|AAG21887.1|  239|Homo sapiens IAP-associated factor V...    44   2e-04
AC068538-1|AAX93227.1|  239|Homo sapiens unknown protein.              44   2e-04
BC111018-1|AAI11019.1|  658|Homo sapiens translin-associated fac...    29   3.5  
BC050693-1|AAH50693.1|  366|Homo sapiens TSNAXIP1 protein protein.     29   3.5  
AF132730-1|AAF66441.1|  366|Homo sapiens unknown protein.              29   3.5  

>BC034431-1|AAH34431.1|  250|Homo sapiens PDCL2 protein protein.
          Length = 250

 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 55  QNPNEDTEWNDTLRKMGIIPQKEAEFSE-ADIVNMIEDTIQEKEAEK 192
           Q+PNEDTEWND LR  GI+P KE    E  ++V  ++     K  EK
Sbjct: 2   QDPNEDTEWNDILRDFGILPPKEESKDEIEEMVLRLQKEAMVKPFEK 48


>BC001021-1|AAH01021.1|  239|Homo sapiens phosducin-like 3 protein.
          Length = 239

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 55  QNPNEDTEWNDTLRKMGIIPQKEA 126
           Q+PN DTEWND LRK GI+P KE+
Sbjct: 2   QDPNADTEWNDILRKKGILPPKES 25


>AF267853-1|AAG44722.1|  239|Homo sapiens HTPHLP protein.
          Length = 239

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 55  QNPNEDTEWNDTLRKMGIIPQKEA 126
           Q+PN DTEWND LRK GI+P KE+
Sbjct: 2   QDPNADTEWNDILRKKGILPPKES 25


>AF110511-1|AAG21887.1|  239|Homo sapiens IAP-associated factor
           VIAF1 protein.
          Length = 239

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 55  QNPNEDTEWNDTLRKMGIIPQKEA 126
           Q+PN DTEWND LRK GI+P KE+
Sbjct: 2   QDPNADTEWNDILRKKGILPPKES 25


>AC068538-1|AAX93227.1|  239|Homo sapiens unknown protein.
          Length = 239

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 55  QNPNEDTEWNDTLRKMGIIPQKEA 126
           Q+PN DTEWND LRK GI+P KE+
Sbjct: 2   QDPNADTEWNDILRKKGILPPKES 25


>BC111018-1|AAI11019.1|  658|Homo sapiens translin-associated factor
           X interacting protein 1 protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = +1

Query: 91  LRKMGIIPQKEAEFSEADIVNMIEDTIQEKEAEKQKQ 201
           LR  G++  K+   S+ D+VN+++D  +E+ AE+QK+
Sbjct: 381 LRFDGLVENKKP--SKKDVVNLLKDAWKERLAEEQKE 415


>BC050693-1|AAH50693.1|  366|Homo sapiens TSNAXIP1 protein protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = +1

Query: 91  LRKMGIIPQKEAEFSEADIVNMIEDTIQEKEAEKQKQ 201
           LR  G++  K+   S+ D+VN+++D  +E+ AE+QK+
Sbjct: 89  LRFDGLVENKKP--SKKDVVNLLKDAWKERLAEEQKE 123


>AF132730-1|AAF66441.1|  366|Homo sapiens unknown protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = +1

Query: 91  LRKMGIIPQKEAEFSEADIVNMIEDTIQEKEAEKQKQ 201
           LR  G++  K+   S+ D+VN+++D  +E+ AE+QK+
Sbjct: 89  LRFDGLVENKKP--SKKDVVNLLKDAWKERLAEEQKE 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,060,530
Number of Sequences: 237096
Number of extensions: 730890
Number of successful extensions: 1736
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)