Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31435
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   0.82 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   1.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.6  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   7.6  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +3

Query: 441 HHIPNGDMYSRRSPAPMYSGRGGPPAVAGGYERD 542
           HH   G+  + R+PAP     G   A  G    D
Sbjct: 264 HHKCGGEEEAERAPAPAVRAAGDAAAARGAARAD 297


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 270 ARTHAGPRRTHSARHRAPPADRVRSRAP 187
           A T  G  +TH   HRA P  RV  + P
Sbjct: 171 AFTTKGNLKTHMGVHRAKPPMRVLHQCP 198


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 276 PSARTHAGPRRTHSARHRAP 217
           P+   H GP  TH A   +P
Sbjct: 48  PAGNAHTGPTGTHDAGFPSP 67


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 483 QVIFGCTCPR*VCGEQVSGVHTVRARRSG 397
           + +F   C        V GV  +RARR+G
Sbjct: 314 KALFLFACTNSCMNPVVYGVFNIRARRTG 342


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 483 QVIFGCTCPR*VCGEQVSGVHTVRARRSG 397
           + +F   C        V GV  +RARR+G
Sbjct: 314 KALFLFACTNSCMNPVVYGVFNIRARRTG 342


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 455 RGHVQPKITCPHVFRAWRSTCSGRRLRERSLCTT 556
           +  VQP +  P  F      C    LRER++  T
Sbjct: 64  KSQVQPSVITPTGFLKECYCCRESFLRERTITLT 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,433
Number of Sequences: 336
Number of extensions: 2734
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)