Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31435
(581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 33 0.15
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 33 0.15
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 32 0.34
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 1.8
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 4.2
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 28 4.2
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 28 4.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 4.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 4.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 4.2
U70844-6|AAQ91891.1| 119|Caenorhabditis elegans Hypothetical pr... 28 5.6
U70844-5|AAB09096.2| 148|Caenorhabditis elegans Hypothetical pr... 28 5.6
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 5.6
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 27 7.4
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81121-3|CAJ80825.1| 501|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z70308-15|CAJ80814.1| 501|Caenorhabditis elegans Hypothetical p... 27 7.4
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 27 7.4
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 27 7.4
Z70308-8|CAJ76942.1| 475|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z70308-7|CAA94352.1| 508|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 27 7.4
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 27 7.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 27 7.4
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 27 7.4
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 27 7.4
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 27 7.4
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 27 7.4
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 27 7.4
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 27 7.4
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 9.7
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 27 9.7
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 27 9.7
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 27 9.7
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 27 9.7
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 27 9.7
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 27 9.7
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 465 TCPR*VCGEQVSGVHTVRARRSGGRHRQAHRNVAYPPPLRCDSG 334
TCP + E+ SG+H + G RH+Q R +AYP D G
Sbjct: 150 TCP--ILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPNGQYMDRG 191
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 465 TCPR*VCGEQVSGVHTVRARRSGGRHRQAHRNVAYPPPLRCDSG 334
TCP + E+ SG+H + G RH+Q R +AYP D G
Sbjct: 150 TCP--ILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPNGQYMDRG 191
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 31.9 bits (69), Expect = 0.34
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 336 QNHISVVEGTRRYDEPAYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPP 515
Q +S EG+ + A +H D Q P P + P RR+ + Y RGGPP
Sbjct: 800 QRRLSKFEGSIQNLRAATSTQHLDSMQQLHFPMPDYEPPQPPQQRRRTESSGY--RGGPP 857
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 327 RQGKQAPAV-HKRP*GRDPSARTHAGPRRTHSARHRAPPADRVRSRAP 187
R+ +++P+ +R R P R+ + PRR S PP + RSR+P
Sbjct: 109 RRTRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSP 156
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = -3
Query: 360 PPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSA----RHRAPPADRVRSR 193
PPP R S APA + R R PS RR ++ R R P R++
Sbjct: 266 PPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESASPPRRRARIIPRYECRAQ 325
Query: 192 APDLAGP 172
P L P
Sbjct: 326 KPALLSP 332
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = -3
Query: 360 PPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSA----RHRAPPADRVRSR 193
PPP R S APA + R R PS RR ++ R R P R++
Sbjct: 266 PPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESASPPRRRARIIPRYECRAQ 325
Query: 192 APDLAGP 172
P L P
Sbjct: 326 KPALLSP 332
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 4.2
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
Frame = -3
Query: 393 RHRQAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*G---------RDPSA--RTHAGPR 247
R R++ P P R S S + QAP + P G R P+A R P+
Sbjct: 438 RRRRSPSQSKSPAPRRRRSPS--KSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQ 495
Query: 246 RTHSARHRAPPADRVRSRAP 187
R S R R P+ RSR+P
Sbjct: 496 RRRSPRRRRSPSSSSRSRSP 515
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = -3
Query: 360 PPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSA----RHRAPPADRVRSR 193
PPP R S APA + R R PS RR ++ R R P R++
Sbjct: 266 PPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESASPPRRRARIIPRYECRAQ 325
Query: 192 APDLAGP 172
P L P
Sbjct: 326 KPALLSP 332
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = -3
Query: 360 PPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSA----RHRAPPADRVRSR 193
PPP R S APA + R R PS RR ++ R R P R++
Sbjct: 266 PPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESASPPRRRARIIPRYECRAQ 325
Query: 192 APDLAGP 172
P L P
Sbjct: 326 KPALLSP 332
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = -3
Query: 357 PPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTH-AGPRRTHSARHRAPPADRVRSRAPDL 181
PP S RQ + P G P+ R H GP ++ S+ R P R R+P
Sbjct: 436 PPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGP--RGPRRSPPT 493
Query: 180 AGPSCMVRPEAGARVARG 127
P P GA +G
Sbjct: 494 GSPP-TGSPPTGAPPKKG 510
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = -3
Query: 357 PPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTH-AGPRRTHSARHRAPPADRVRSRAPDL 181
PP S RQ + P G P+ R H GP ++ S+ R P R R+P
Sbjct: 457 PPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGP--RGPRRSPPT 514
Query: 180 AGPSCMVRPEAGARVARG 127
P P GA +G
Sbjct: 515 GSPP-TGSPPTGAPPKKG 531
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = -3
Query: 357 PPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTH-AGPRRTHSARHRAPPADRVRSRAPDL 181
PP S RQ + P G P+ R H GP ++ S+ R P R R+P
Sbjct: 442 PPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGP--RGPRRSPPT 499
Query: 180 AGPSCMVRPEAGARVARG 127
P P GA +G
Sbjct: 500 GSPP-TGSPPTGAPPKKG 516
>U70844-6|AAQ91891.1| 119|Caenorhabditis elegans Hypothetical
protein ZK154.6b protein.
Length = 119
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -3
Query: 414 RARRSGGRHRQAHRNVAYP--PPL 349
RARR+G R R N+AYP PPL
Sbjct: 92 RARRAGRRPRNETDNIAYPSAPPL 115
>U70844-5|AAB09096.2| 148|Caenorhabditis elegans Hypothetical
protein ZK154.6a protein.
Length = 148
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -3
Query: 414 RARRSGGRHRQAHRNVAYP--PPL 349
RARR+G R R N+AYP PPL
Sbjct: 121 RARRAGRRPRNETDNIAYPSAPPL 144
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform a protein.
Length = 1256
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 375 DEPAYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYS 497
++P + H DE Q E+P P + + + +R P+P+ S
Sbjct: 414 EQPNFRSYHNDEPTQ-EQPNPRYQRSSSNFMQQRDPSPVRS 453
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 129 PVRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALM 275
P R PP+D + + ++ E AAPYDE Y ++R +++
Sbjct: 2866 PPRGMAPPKDDHELNSK---IKDLETDQNAAPYDELRIYDDERDNISVV 2911
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 129 PVRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALM 275
P R PP+D + + ++ E AAPYDE Y ++R +++
Sbjct: 2866 PPRGMAPPKDDHELNSK---IKDLETDQNAAPYDELRIYDDERDNISVV 2911
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical protein
W02B9.1a protein.
Length = 1223
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 129 PVRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALM 275
P R PP+D + + ++ E AAPYDE Y ++R +++
Sbjct: 1169 PPRGMAPPKDDHELNSK---IKDLETDQNAAPYDELRIYDDERDNISVV 1214
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 717 AGARSKRGKMRGPPASRSWS 736
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 717 AGARSKRGKMRGPPASRSWS 736
>Z81121-3|CAJ80825.1| 501|Caenorhabditis elegans Hypothetical
protein F49E11.1e protein.
Length = 501
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 416 AGARSKRGKMRGPPASRSWS 435
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 717 AGARSKRGKMRGPPASRSWS 736
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 717 AGARSKRGKMRGPPASRSWS 736
>Z70308-15|CAJ80814.1| 501|Caenorhabditis elegans Hypothetical
protein F49E11.1e protein.
Length = 501
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 416 AGARSKRGKMRGPPASRSWS 435
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 717 AGARSKRGKMRGPPASRSWS 736
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 717 AGARSKRGKMRGPPASRSWS 736
>Z70308-8|CAJ76942.1| 475|Caenorhabditis elegans Hypothetical
protein F49E11.1d protein.
Length = 475
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 390 AGARSKRGKMRGPPASRSWS 409
>Z70308-7|CAA94352.1| 508|Caenorhabditis elegans Hypothetical
protein F49E11.1a protein.
Length = 508
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 423 AGARSKRGKMRGPPASRSWS 442
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 333 SVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPADRVRSRAPD 184
++R G+ +R R P R PRR +R R DR R R+ D
Sbjct: 260 AIRMGRNGDDRDRRR-SRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRD 308
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 333 SVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPADRVRSRAPD 184
++R G+ +R R P R PRR +R R DR R R+ D
Sbjct: 260 AIRMGRNGDDRDRRR-SRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRD 308
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 144 PPPRDAPYMRDRPGPVRGYERGPPAAPYDER 236
PPP+ APY+ P + PP APY ++
Sbjct: 31 PPPKPAPYVEQSAQP-QQTAPPPPPAPYPQQ 60
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 150 AGARVARGRLRDAPCHRAWN 91
AGAR RG++R P R+W+
Sbjct: 717 AGARSKRGKMRGPPASRSWS 736
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 129 PVRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALM 275
P R PP+D + + ++ E AAPYDE Y ++R +++
Sbjct: 2866 PPRGMAPPKDDHELNSK---IKDLETDQNAAPYDELRIYDDERDNISVV 2911
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 129 PVRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALM 275
P R PP+D + + ++ E AAPYDE Y ++R +++
Sbjct: 2866 PPRGMAPPKDDHELNSK---IKDLETDQNAAPYDELRIYDDERDNISVV 2911
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 339 NHISVVEGTRRYDEPAYDDRHYDERAQYERPRPAHHIPNGDM 464
N + VE + DEPA ++ E A E P PA P ++
Sbjct: 94 NDEAQVEESAPADEPAPEEEKPQEEAPAEEPAPAEEAPQEEV 135
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 129 PVRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALM 275
P R PP+D + + ++ E AAPYDE Y ++R +++
Sbjct: 1169 PPRGMAPPKDDHELNSK---IKDLETDQNAAPYDELRIYDDERDNISVV 1214
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 135 RHAPPPRDAPYMRDRPGPVRGYERGPPAAP 224
+ APPP+ A M P P P AAP
Sbjct: 28 KKAPPPKSASKMTAPPAPASAPPAAPDAAP 57
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = -3
Query: 441 EQVSGVHTVRARRSGGRHRQAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSART 262
+QV R RRS + ++ + A PP R S S + + R R S
Sbjct: 138 KQVRSNSQRRRRRSDSQ--ESSKRSASPPVRRGRSKSRSRSRSPSRSRSRSRSRSVSRSK 195
Query: 261 HAGPRRTHSARHRAPPADRVRSRA 190
R +RHR+ +R RSR+
Sbjct: 196 SPASRNGRVSRHRSRSQNRSRSRS 219
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = -3
Query: 441 EQVSGVHTVRARRSGGRHRQAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSART 262
+QV R RRS + ++ + A PP R S S + + R R S
Sbjct: 138 KQVRSNSQRRRRRSDSQ--ESSKRSASPPVRRGRSKSRSRSRSPSRSRSRSRSRSVSRSK 195
Query: 261 HAGPRRTHSARHRAPPADRVRSRA 190
R +RHR+ +R RSR+
Sbjct: 196 SPASRNGRVSRHRSRSQNRSRSRS 219
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.1 bits (57), Expect = 9.7
Identities = 30/124 (24%), Positives = 44/124 (35%)
Frame = +3
Query: 132 VRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALMDRGPRDXXXXXX 311
VR PP R P R P +E P PY R ++R + + R
Sbjct: 640 VREPPPKRPPPPHRQTP-----HELYPEEQPYVRRPPPPQNRGNYEV----ERSREYVPE 690
Query: 312 XXXXDERYQNHISVVEGTRRYDEPAYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPM 491
+ Y+ H S G R ++P Y + + +YE P+ P + R P
Sbjct: 691 APRPRQGYE-HSSGYGGDDRKEQPKYMESRPVDEPRYETDAPSRSRPLKKVEIIRHPERG 749
Query: 492 YSGR 503
Y R
Sbjct: 750 YDRR 753
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 132 VRHAPPPRDAPYMRDRPGPVRGYER 206
V+ AP P P R RPGP ER
Sbjct: 391 VKQAPAPVPVPPARPRPGPALNRER 415
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 27.1 bits (57), Expect = 9.7
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Frame = +3
Query: 129 PVRHAPPPRDAPYMRDR-----PGPVRGYERGPPAAPYDERYAYGEDRRGFALMDRGP 287
P+R PPR A RDR P P R P D R G +R A R P
Sbjct: 67 PIRRGSPPRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRASPRRSP 124
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 354 VEGTRRYDEPAYDDRHYDERAQYERPRPAHHIPNGDM 464
VE + DEPA ++ E A E P PA P ++
Sbjct: 149 VEESAPADEPAPEEEKPQEEAPAEEPAPAEEAPQEEV 185
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 354 VEGTRRYDEPAYDDRHYDERAQYERPRPAHHIPNGDM 464
VE + DEPA ++ E A E P PA P ++
Sbjct: 149 VEESAPADEPAPEEEKPQEEAPAEEPAPAEEAPQEEV 185
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 354 VEGTRRYDEPAYDDRHYDERAQYERPRPAHHIPNGDM 464
VE + DEPA ++ E A E P PA P ++
Sbjct: 149 VEESAPADEPAPEEEKPQEEAPAEEPAPAEEAPQEEV 185
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.1 bits (57), Expect = 9.7
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = -3
Query: 429 GVHTVRARRSGGRHRQAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGP 250
G+ + RS R R R+ + S R+ + + G +R+ +
Sbjct: 15 GLEMAKNDRSQSRQRSPARSNRSRSRSKDRKSSSRRSRSRSRDRRGDRGDRRRSRSRSKD 74
Query: 249 RRTHSARHRAPPADRVRSRAPDLAGP 172
RRT R R+P +R RSR+ D P
Sbjct: 75 RRT--TRRRSPSRERRRSRSRDRGAP 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,480,036
Number of Sequences: 27780
Number of extensions: 267419
Number of successful extensions: 1005
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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