Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31429
         (765 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest...    34   0.48 
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest...    34   0.48 
Y00839-2|CAA68764.1|  749|Homo sapiens 70 kD alpha-glucosidase p...    33   1.1  
Y00839-1|CAA68763.1|  952|Homo sapiens glucan 1, 4-alpha-glucosi...    33   1.1  
X55080-1|CAC12967.1|  952|Homo sapiens acid alpha-glucosidase pr...    33   1.1  
M34424-1|AAA52506.1|  952|Homo sapiens GAA protein.                    33   1.1  
DQ907243-1|ABI53718.1|  952|Homo sapiens alpha-glucosidase protein.    33   1.1  
BC040431-1|AAH40431.1|  952|Homo sapiens glucosidase, alpha; aci...    33   1.1  
L19606-1|AAA03539.1|  450|Homo sapiens paired box homeotic prote...    31   3.4  
BC001060-1|AAH01060.1|  450|Homo sapiens paired box gene 8 protein.    31   3.4  
AC016683-2|AAX88880.1|  450|Homo sapiens unknown protein.              31   3.4  
BC047411-1|AAH47411.1|  592|Homo sapiens tubulin tyrosine ligase...    31   6.0  
BC031288-1|AAH31288.1|  265|Homo sapiens similar to hypothetical...    31   6.0  
BC030650-1|AAH30650.1|  592|Homo sapiens TTLL2 protein protein.        31   6.0  
AY026506-1|AAK20169.1|  592|Homo sapiens testis specific protein...    31   6.0  
AL021331-3|CAD92564.1|  592|Homo sapiens RP3-366N23.3 protein.         31   6.0  
BC036099-1|AAH36099.1|  716|Homo sapiens ARNT2 protein protein.        30   7.9  
AK096229-1|BAC04732.1|  454|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AF185610-1|AAG15310.1|  706|Homo sapiens aryl-hydrocarbon recept...    30   7.9  
AB002305-1|BAA20766.2|  716|Homo sapiens KIAA0307 protein.             30   7.9  

>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
            subunit protein.
          Length = 1970

 Score = 34.3 bits (75), Expect = 0.48
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +3

Query: 342  PRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 494
            PR+ GG  P  P  +    S+S TSP   P S NY      Y PT  +  PTSP
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655


>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
            subunit protein.
          Length = 1970

 Score = 34.3 bits (75), Expect = 0.48
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +3

Query: 342  PRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 494
            PR+ GG  P  P  +    S+S TSP   P S NY      Y PT  +  PTSP
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655


>Y00839-2|CAA68764.1|  749|Homo sapiens 70 kD alpha-glucosidase
           protein.
          Length = 749

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 255 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 395
           +F +++  DG +    E +N I   E G P N   NPP VP V  G+
Sbjct: 302 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 348


>Y00839-1|CAA68763.1|  952|Homo sapiens glucan 1,
           4-alpha-glucosidase protein.
          Length = 952

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 255 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 395
           +F +++  DG +    E +N I   E G P N   NPP VP V  G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551


>X55080-1|CAC12967.1|  952|Homo sapiens acid alpha-glucosidase
           protein.
          Length = 952

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 255 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 395
           +F +++  DG +    E +N I   E G P N   NPP VP V  G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551


>M34424-1|AAA52506.1|  952|Homo sapiens GAA protein.
          Length = 952

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 255 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 395
           +F +++  DG +    E +N I   E G P N   NPP VP V  G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551


>DQ907243-1|ABI53718.1|  952|Homo sapiens alpha-glucosidase protein.
          Length = 952

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 255 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 395
           +F +++  DG +    E +N I   E G P N   NPP VP V  G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551


>BC040431-1|AAH40431.1|  952|Homo sapiens glucosidase, alpha; acid
           (Pompe disease, glycogen storage disease type II)
           protein.
          Length = 952

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 255 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 395
           +F +++  DG +    E +N I   E G P N   NPP VP V  G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551


>L19606-1|AAA03539.1|  450|Homo sapiens paired box homeotic protein
           protein.
          Length = 450

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +3

Query: 276 PDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 455
           P  +  Y   T   + +  + V   L G PP +P   QGS++ ++  G+     Y  +  
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405

Query: 456 GYQP 467
           G+ P
Sbjct: 406 GHTP 409


>BC001060-1|AAH01060.1|  450|Homo sapiens paired box gene 8 protein.
          Length = 450

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +3

Query: 276 PDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 455
           P  +  Y   T   + +  + V   L G PP +P   QGS++ ++  G+     Y  +  
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405

Query: 456 GYQP 467
           G+ P
Sbjct: 406 GHTP 409


>AC016683-2|AAX88880.1|  450|Homo sapiens unknown protein.
          Length = 450

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +3

Query: 276 PDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 455
           P  +  Y   T   + +  + V   L G PP +P   QGS++ ++  G+     Y  +  
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405

Query: 456 GYQP 467
           G+ P
Sbjct: 406 GHTP 409


>BC047411-1|AAH47411.1|  592|Homo sapiens tubulin tyrosine
           ligase-like family, member 2 protein.
          Length = 592

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 334 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 477
           ++FH++  E P   P L   H+P   L  + S   +   +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542


>BC031288-1|AAH31288.1|  265|Homo sapiens similar to hypothetical
           protein MGC49416 protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +3

Query: 231 EGYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQG 392
           +GY AE    G+ +  DGS T       G A+  +  PR  GG   A+   A+G
Sbjct: 26  QGY-AEPEGVGDAVRADGSVTLVLPQTRGPASSHRESPRGSGGAEAALEEAARG 78


>BC030650-1|AAH30650.1|  592|Homo sapiens TTLL2 protein protein.
          Length = 592

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 334 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 477
           ++FH++  E P   P L   H+P   L  + S   +   +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542


>AY026506-1|AAK20169.1|  592|Homo sapiens testis specific protein
           NYD-TSPG protein.
          Length = 592

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 334 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 477
           ++FH++  E P   P L   H+P   L  + S   +   +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542


>AL021331-3|CAD92564.1|  592|Homo sapiens RP3-366N23.3 protein.
          Length = 592

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 334 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 477
           ++FH++  E P   P L   H+P   L  + S   +   +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542


>BC036099-1|AAH36099.1|  716|Homo sapiens ARNT2 protein protein.
          Length = 716

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 366 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 494
           P   + +Q S + +SP G+  S  Y AD + Y P  +   +SP
Sbjct: 582 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 624


>AK096229-1|BAC04732.1|  454|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38910 fis, clone NT2NE2006813, weakly similar to
           CELL SURFACE GLYCOPROTEIN 1 PRECURSOR. ).
          Length = 454

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +1

Query: 343 HVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVMLSPLPHQCLSRSLVL 522
           H +LV    L  S H +    H L + P  S+ SP R   SPL+   P P   +   L  
Sbjct: 32  HYSLVSPHRLLMSPHYSPMSPHRLLMSPHYSLVSPHRLLMSPLLSGVPSPPSDVPSLLSG 91

Query: 523 LPTSP 537
           +P+ P
Sbjct: 92  VPSLP 96


>AF185610-1|AAG15310.1|  706|Homo sapiens aryl-hydrocarbon receptor
           nuclear translocator 2 protein.
          Length = 706

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 366 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 494
           P   + +Q S + +SP G+  S  Y AD + Y P  +   +SP
Sbjct: 571 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 613


>AB002305-1|BAA20766.2|  716|Homo sapiens KIAA0307 protein.
          Length = 716

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 366 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 494
           P   + +Q S + +SP G+  S  Y AD + Y P  +   +SP
Sbjct: 581 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 623


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,159,283
Number of Sequences: 237096
Number of extensions: 2815020
Number of successful extensions: 17087
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 16341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17034
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)