BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV31423 (503 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 4.0 AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 4.0 Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 29 7.0 BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 29 7.0 AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 29 7.0 AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 29 7.0 BC014502-1|AAH14502.1| 110|Homo sapiens Unknown (protein for IM... 29 9.2 AF091081-1|AAC72950.1| 303|Homo sapiens unknown protein. 29 9.2 >BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. Length = 322 Score = 30.3 bits (65), Expect = 4.0 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 216 TPLRPKPA*PNPARICSLWSPESRE 290 TP P P P PA +CS SPE R+ Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92 >AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type containing 12 protein. Length = 210 Score = 30.3 bits (65), Expect = 4.0 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 216 TPLRPKPA*PNPARICSLWSPESRE 290 TP P P P PA +CS SPE R+ Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92 >Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. Length = 803 Score = 29.5 bits (63), Expect = 7.0 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = +2 Query: 194 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 301 P++G+ A++AEA+L+ES + + VEP G +Q Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234 >BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain containing 17 protein. Length = 803 Score = 29.5 bits (63), Expect = 7.0 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = +2 Query: 194 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 301 P++G+ A++AEA+L+ES + + VEP G +Q Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234 >AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain containing 17 protein. Length = 803 Score = 29.5 bits (63), Expect = 7.0 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = +2 Query: 194 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 301 P++G+ A++AEA+L+ES + + VEP G +Q Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234 >AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain containing 17 variant protein. Length = 803 Score = 29.5 bits (63), Expect = 7.0 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = +2 Query: 194 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 301 P++G+ A++AEA+L+ES + + VEP G +Q Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234 >BC014502-1|AAH14502.1| 110|Homo sapiens Unknown (protein for IMAGE:4860374) protein. Length = 110 Score = 29.1 bits (62), Expect = 9.2 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = +2 Query: 167 GRAAGGAKLPSAGLCLNASKAEA-SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRET 343 G A GA G C + +K+E +L + G LTV R+ G T + +KRE Sbjct: 24 GEAGAGAPTGPWGSCPHQAKSEREALPQPGPPPLTVSARKQGHFLASWGTLEIRETKREE 83 Query: 344 RRRSP 358 +P Sbjct: 84 EGDAP 88 >AF091081-1|AAC72950.1| 303|Homo sapiens unknown protein. Length = 303 Score = 29.1 bits (62), Expect = 9.2 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +1 Query: 160 CTRPSGRWCEAT-IRGIMPERL*GRSQPSRIRQGYAHCGAPRVGRL 294 C+RP+GRW + T + P+ L +PSR + C R RL Sbjct: 170 CSRPAGRWGDLTMLPSPRPQLLPALRRPSRACCAWPTCSPHRPHRL 215 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 76,764,578 Number of Sequences: 237096 Number of extensions: 1618734 Number of successful extensions: 4018 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3849 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4011 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4649883964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -