Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31416
         (449 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0453 + 10420585-10421661,10422015-10422146,10422232-104224...    28   4.0  
05_03_0353 - 12856385-12857705,12858007-12858959                       27   5.3  
05_04_0345 + 20451497-20451740,20452078-20452159,20452837-204528...    27   7.0  
10_08_0518 + 18486315-18486462,18486495-18486712,18486763-184868...    27   9.2  

>02_02_0453 +
           10420585-10421661,10422015-10422146,10422232-10422456,
           10422555-10422680,10422777-10422839,10423214-10423296,
           10424078-10424309,10424421-10424489,10424532-10424731,
           10424819-10424894,10425015-10425081,10425194-10425471,
           10425600-10425787,10426235-10426391,10426496-10426741
          Length = 1072

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 426 VCGCDHLAGNVCGCDWHGNGRLHDGQGNNAG 334
           VC C H  G++C CD    G+  D    + G
Sbjct: 8   VCSCPHYKGSLCFCDCGCFGQTPDSPRESRG 38


>05_03_0353 - 12856385-12857705,12858007-12858959
          Length = 757

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -3

Query: 390 GCDWHGNGRLHDGQGNNAGSLVSITKVFGEVL 295
           GC+W   G    GQ   A S VS T    E+L
Sbjct: 172 GCEWSDPGFFLRGQEEEASSSVSTTTAMEEIL 203


>05_04_0345 +
           20451497-20451740,20452078-20452159,20452837-20452882,
           20453669-20454352
          Length = 351

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 392 HTLPARWSHPHTLP 433
           H LP +W+HP T+P
Sbjct: 145 HQLPQKWAHPITMP 158


>10_08_0518 +
           18486315-18486462,18486495-18486712,18486763-18486808,
           18487436-18487709,18487797-18488052
          Length = 313

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = +1

Query: 7   LAICLCLTVALAAETGKYTPFQYNRVYS---TVSPFVYK-PGRYVADPGRYDPSR 159
           LAI   L V   +    Y+  Q  ++YS   TV   V + PGR  AD G+YD  R
Sbjct: 112 LAILDALAVPKVSSFESYSCMQTVKLYSLIVTVEELVLQQPGRAEADFGKYDIRR 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.135    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,207,749
Number of Sequences: 37544
Number of extensions: 199014
Number of successful extensions: 586
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)