Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31416
         (449 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U27699-1|AAA87029.1|  614|Homo sapiens pephBGT-1 betaine-GABA tr...    31   1.8  
L42300-1|AAA66574.1|  614|Homo sapiens betaine/GABA transporter ...    31   1.8  
BC126217-1|AAI26218.1|  614|Homo sapiens solute carrier family 6...    31   1.8  
BC126215-1|AAI26216.1|  614|Homo sapiens solute carrier family 6...    31   1.8  

>U27699-1|AAA87029.1|  614|Homo sapiens pephBGT-1 betaine-GABA
           transporter protein.
          Length = 614

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   VFLAICLCLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVA 132
           +FL   LCL   L +   KYTP +YN VY    P+ Y  G ++A
Sbjct: 502 LFLTPGLCLATFLFS-LSKYTPLKYNNVY-VYPPWGYSIGWFLA 543


>L42300-1|AAA66574.1|  614|Homo sapiens betaine/GABA transporter
           protein.
          Length = 614

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   VFLAICLCLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVA 132
           +FL   LCL   L +   KYTP +YN VY    P+ Y  G ++A
Sbjct: 502 LFLTPGLCLATFLFS-LSKYTPLKYNNVY-VYPPWGYSIGWFLA 543


>BC126217-1|AAI26218.1|  614|Homo sapiens solute carrier family 6
           (neurotransmitter transporter, betaine/GABA), member 12
           protein.
          Length = 614

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   VFLAICLCLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVA 132
           +FL   LCL   L +   KYTP +YN VY    P+ Y  G ++A
Sbjct: 502 LFLTPGLCLATFLFS-LSKYTPLKYNNVY-VYPPWGYSIGWFLA 543


>BC126215-1|AAI26216.1|  614|Homo sapiens solute carrier family 6
           (neurotransmitter transporter, betaine/GABA), member 12
           protein.
          Length = 614

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   VFLAICLCLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVA 132
           +FL   LCL   L +   KYTP +YN VY    P+ Y  G ++A
Sbjct: 502 LFLTPGLCLATFLFS-LSKYTPLKYNNVY-VYPPWGYSIGWFLA 543


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.135    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,984,474
Number of Sequences: 237096
Number of extensions: 1068168
Number of successful extensions: 3753
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3753
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)