Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31416
         (449 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51) ide...    28   2.5  
At3g14490.1 68416.m01835 terpene synthase/cyclase family protein...    27   5.9  
At3g13400.1 68416.m01685 multi-copper oxidase type I family prot...    27   7.7  

>At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51)
           identical to obtusifoliol 14-demethylase (GI:14624983)
           [Arabidopsis thaliana]
          Length = 488

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +1

Query: 34  ALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 204
           ++ A  GK        + +T   F  +      DP  YDP R + GR     +GA++
Sbjct: 366 SVTARDGKTYDIPKGHIVATSPAFANRLPHIFKDPDTYDPERFSPGREEDKAAGAFS 422


>At3g14490.1 68416.m01835 terpene synthase/cyclase family protein
           contains Pfam profile: PF01397 terpene synthase family
          Length = 601

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +2

Query: 383 SHPHTLPARWSHPHTL---PARWYH 448
           ++P   P RW H HTL   PA+ +H
Sbjct: 19  TNPSLFPRRWLHKHTLSLKPAKQHH 43


>At3g13400.1 68416.m01685 multi-copper oxidase type I family protein
           similar to pollen-specific BP10 protein
           [SP|Q00624][Brassica napus]; contains Pfam profile:
           PF00394 Multicopper oxidase
          Length = 551

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 13  ICLCLTVALAAETGKYTPFQYNRVYSTVSP 102
           +CL  TVAL +    Y  + +N  Y T +P
Sbjct: 11  VCLASTVALVSAGDPYFYYTWNVTYGTAAP 40


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.317    0.135    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,460,676
Number of Sequences: 28952
Number of extensions: 142985
Number of successful extensions: 427
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)