Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31414
         (727 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    39   0.11 
UniRef50_Q4YPP7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  
UniRef50_A0CA79 Cluster: Chromosome undetermined scaffold_160, w...    33   9.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -1

Query: 142 WVDELTVHPVLSGYWSP 92
           WVDELT H VLSGYWSP
Sbjct: 159 WVDELTAHLVLSGYWSP 175


>UniRef50_Q4YPP7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 618

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -3

Query: 626 CSFDSKKTR*NIFKKYGFLKKAFNIPY*TI-IIVRFSTFSERRECSFRNTQWSCEYSLQI 450
           C+ +++K   N+F +Y  L K F IPY T+ I+      +ER   +F N ++  +  L I
Sbjct: 438 CNNNNRKK--NVFNEYNNLYKNFCIPYETMDILYNLRKENERNNTNFENNKYDAQKFLDI 495


>UniRef50_A0CA79 Cluster: Chromosome undetermined scaffold_160,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_160,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 404

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = -1

Query: 610 KKPA-KIYLKSTGF*KKLSTFLTKR**LYVSLPSPSVVNVHSEIRNGAANIHFKFLNINC 434
           K PA K ++ + G+ + L   LTK    +V L + + V VHS+I+N  A++H   L    
Sbjct: 327 KHPAEKYFVLAKGY-QLLRECLTKSASSFVQLQAINYVLVHSQIQNLHAHLHLLELFYPS 385

Query: 433 GEILTKLVSKMSFLR 389
             +L K  S + FL+
Sbjct: 386 SPLLLKYNSSLQFLQ 400


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,432,524
Number of Sequences: 1657284
Number of extensions: 9271098
Number of successful extensions: 14841
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14838
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)