Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31414
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   3.9  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   3.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.9  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   5.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.0  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 242 KVVIRSKRRNVVQNTSFPLIF 180
           K   RSKR +V+    FP++F
Sbjct: 407 KFPTRSKRIDVISRIFFPIVF 427


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 242 KVVIRSKRRNVVQNTSFPLIF 180
           K   RSKR +V+    FP++F
Sbjct: 407 KFPTRSKRIDVISRIFFPIVF 427


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 559 KAFFKNPYFLNIF*RVFLESN 621
           K ++KN  F  ++ R F++SN
Sbjct: 22  KGWWKNAIFYQVYPRSFMDSN 42


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 512 SERRECSFRNTQWSCEYSLQ 453
           +E +EC +    +SC YSL+
Sbjct: 3   NEPQECPYCRRNFSCYYSLK 22


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +2

Query: 530 QLLSFSKEC*KLFLKTRTF*IYFSGFF*NQTNISVIFKISNQFRSRIDSLECDFIKFP 703
           QLL       KLF   + F I+F      + NI+    I + + + I   +  FI+ P
Sbjct: 103 QLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQLP 160


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +2

Query: 530 QLLSFSKEC*KLFLKTRTF*IYFSGFF*NQTNISVIFKISNQFRSRIDSLECDFIKFP 703
           QLL       KLF   + F I+F      + NI+    I + + + I   +  FI+ P
Sbjct: 103 QLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQLP 160


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,726
Number of Sequences: 438
Number of extensions: 2835
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)