Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31410
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20682| Best HMM Match : HWE_HK (HMM E-Value=0.35) 30 1.9
SB_41731| Best HMM Match : bZIP_1 (HMM E-Value=0.014) 30 2.5
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 3.3
SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28) 29 4.4
SB_2790| Best HMM Match : HSBP1 (HMM E-Value=0.15) 29 4.4
SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_24482| Best HMM Match : KID (HMM E-Value=0.045) 29 4.4
SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_52352| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28) 28 7.7
SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28) 28 7.7
SB_38981| Best HMM Match : APS_kinase (HMM E-Value=0) 28 7.7
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 28 7.7
>SB_20682| Best HMM Match : HWE_HK (HMM E-Value=0.35)
Length = 450
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 509 KVENLEKKIEFLERDKKGNNIIIYGLKEGE-KSTRELIENAKNKFQKELNLVLEDYDINK 685
+V ++ +E+LE + NNI + G+ E +S + K Q +L L +E I +
Sbjct: 91 EVVKVKDALEYLENQSRRNNIRMSGIPESPGESWADSEAKVKEAIQTKLGLEIE---IER 147
Query: 686 IYRIGK 703
+R+GK
Sbjct: 148 AHRVGK 153
>SB_41731| Best HMM Match : bZIP_1 (HMM E-Value=0.014)
Length = 289
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 509 KVENLEKKIEFLERDKKGNNIIIYGLKEGEKSTRELIE-NAKNKFQKELNLVLEDYDINK 685
++ ++ +E+LE + NNI + G+ E + + +E K ++ L L +E ++
Sbjct: 88 EISRVQNSLEYLENQSRRNNIRVSGIPESPGESWDDVEAKVKENIKQALGLEIEIERAHR 147
Query: 686 IYRIGKPNK 712
+ R P +
Sbjct: 148 VERRPGPRR 156
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 509 KVENLEKKIEFLERDKKGNNIIIYGLKEGEKSTRELIENAKNKFQKE 649
KV+ L K+ +LE + K ++ LK+ + E IE K +FQ++
Sbjct: 1340 KVQELLHKVTYLEGELKERSVETEKLKQTLQEREEQIERLKEEFQEK 1386
>SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 335
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 509 KVENLEKKIEFLERDKKGNNIIIYGLKEGE-KSTRELIENAKNKFQKELNLVLEDYDINK 685
+V ++ +E+LE + NNI + G+ E +S + K Q +L L +E I +
Sbjct: 99 EVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIE---IER 155
Query: 686 IYRIGKPNKATNRDL 730
+R+ + KA R L
Sbjct: 156 AHRVER-KKAKGRSL 169
>SB_2790| Best HMM Match : HSBP1 (HMM E-Value=0.15)
Length = 263
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 509 KVENLEKKIEFLERDKKGNNIIIYGLKEGE-KSTRELIENAKNKFQKELNLVLEDYDINK 685
+V ++ +E+LE + NNI + G+ E +S + K Q +L L +E I +
Sbjct: 99 EVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIE---IER 155
Query: 686 IYRIGKPNKATNRDL 730
+R+ + KA R L
Sbjct: 156 AHRVER-KKAKGRSL 169
>SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 509 KVENLEKKIEFLERDKKGNNIIIYGLKEGE-KSTRELIENAKNKFQKELNLVLEDYDINK 685
+V ++ +E+LE + NNI + G+ E +S + K Q +L L +E I +
Sbjct: 99 EVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIE---IGR 155
Query: 686 IYRIGKPNKATNRDL 730
+R+ + KA R L
Sbjct: 156 AHRVER-KKAKGRSL 169
>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
Length = 1714
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +2
Query: 509 KVENLEKKI---EFLERDKKGNNIIIYGLKEGEKSTRELIENAKNKFQKELNLVLED 670
K+ NLEK + E LE+ K N + +KE E + ++ +E A K +KE L+ E+
Sbjct: 1631 KICNLEKALKDKEALEKRLKSKNQQLSIIKEEEDAGKKQLEVAFCKLEKERKLLKEE 1687
>SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1045
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 683 KIYRIGKPNKATNRDLYFYPSLGGGKKPKF*KIE 784
KIY KP +A N+ L + PS K+P K++
Sbjct: 182 KIYETRKPTEAANKSLIYEPSRFKPKRPSVSKLK 215
>SB_52352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 28.7 bits (61), Expect = 5.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 119 CWKSSSRSKYWNSHHFEKKTEVI 187
C++ S YWN H F K+ +++
Sbjct: 27 CYQGSRLDPYWNIHDFHKREDIV 49
>SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 469
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 509 KVENLEKKIEFLERDKKGNNIIIYGLKEGE-KSTRELIENAKNKFQKELNLVLEDYDINK 685
+V ++ +E+LE + NNI + G+ E +S + K Q +L L +E I
Sbjct: 99 EVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIE---IES 155
Query: 686 IYRIGKPNKATNRDL 730
+R+ + KA R L
Sbjct: 156 AHRVER-KKAKGRSL 169
>SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 565
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 509 KVENLEKKIEFLERDKKGNNIIIYGLKEGE-KSTRELIENAKNKFQKELNLVLEDYDINK 685
+V ++ +E+LE + NNI + G+ E +S + K Q +L L +E I
Sbjct: 99 EVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIE---IES 155
Query: 686 IYRIGKPNKATNRDL 730
+R+ + KA R L
Sbjct: 156 AHRVER-KKAKGRSL 169
>SB_38981| Best HMM Match : APS_kinase (HMM E-Value=0)
Length = 578
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +2
Query: 503 IFKVENLEKKIEFLERDKKGNNIIIYGLKEGEKSTRELIENAKNKFQKELNLVLEDYDIN 682
I K N+E K + RDK+G + G + G + + L++ LEDY
Sbjct: 46 IVKATNVEYKDHSVSRDKRGQ---VVGTRAGFRGCSVWFTGLSGAGKTTLSMALEDYLCR 102
Query: 683 K---IYRIGKPNKAT--NRDLYFYP 742
+ Y + N T NR+L F P
Sbjct: 103 QGIPAYTLDGDNMRTGLNRNLGFTP 127
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 28.3 bits (60), Expect = 7.7
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 515 ENLEKKIEFLERDKKGNNIIIYGLKEGEKSTREL-IENAKNKFQK-ELNLVLEDYDINKI 688
E LEKKIE +E K N ++ L+ K T EL I + + Q E++ E KI
Sbjct: 601 EELEKKIEEMETSK---NELLVMLENANKKTEELAILLEQERIQSCEVHKTREKLVTEKI 657
Query: 689 YRIGKPNKATNRDL 730
+ N A+NRDL
Sbjct: 658 QFL--QNIASNRDL 669
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,343,023
Number of Sequences: 59808
Number of extensions: 398467
Number of successful extensions: 1144
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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