Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31410
         (800 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64845-2|AAC48031.2|  980|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U29488-7|AAA68771.1|  221|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL132865-3|CAB60603.1|  310|Caenorhabditis elegans Hypothetical ...    29   2.9  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    29   2.9  
Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical ...    28   6.8  

>U64845-2|AAC48031.2|  980|Caenorhabditis elegans Hypothetical
           protein F45F2.10 protein.
          Length = 980

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +2

Query: 584 LKEGEKSTRELIENAKNKFQKELNLVLEDYDINKI 688
           + + +K+   +IEN  ++FQK + + L D D+ ++
Sbjct: 376 MMDHKKALENMIENTDDEFQKNMIIALRDLDLRQV 410


>U29488-7|AAA68771.1|  221|Caenorhabditis elegans Hypothetical
           protein C56C10.3 protein.
          Length = 221

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +2

Query: 515 ENLEKKIEFLER---DKKGNNIIIYGLKEGEKSTRELIENAKNKFQKEL 652
           E LEKK EFLE+   D+K  N + YG K    + + L  N K  F+K+L
Sbjct: 31  EMLEKKQEFLEKKVIDEK-QNAVKYGTKNKRMALQCL--NRKRNFEKQL 76


>AL132865-3|CAB60603.1|  310|Caenorhabditis elegans Hypothetical
           protein Y62E10A.4 protein.
          Length = 310

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = -1

Query: 794 LDFFLFFKTSVFFHPQVKDKSTGLGXSPCLVFQCDRFYLYRNPLRLNLIPFGIYFSHF 621
           LD ++   T  F        +  +  S CL+   DR Y    PLR + +P   Y + F
Sbjct: 71  LDMYMLTSTQCFLLSAYGLFALNMQSSLCLIIGLDRLYNVTYPLRYSQLPNSFYIALF 128


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
           protein Y26D4A.9 protein.
          Length = 1435

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
 Frame = +2

Query: 509 KVENLEKKIEFLERDKKGNNIIIYGLKEGEKSTRELIENAKNKFQKELNLVLEDY--DIN 682
           K+EN  KK E  E  K G N      K+  + T+E +E AK +FQK    V E++  ++ 
Sbjct: 708 KIENKYKK-ESEEVKKTGKN------KDKVEKTKEEVEKAKEEFQK----VKEEFQKEVE 756

Query: 683 KIYRIGKP-NKATNRDLYFY 739
           K+ ++ K   KA   D   Y
Sbjct: 757 KVKKVEKELEKAKESDFKVY 776


>Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical
           protein C41C4.7b protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 642 WNLFFAFSISSLVDFSPSFKPYIIMLLPFLSLSKNSIFFSKFSTLNI 502
           W  FFA+SIS       +FK   ++ L F  LS N + F  ++  N+
Sbjct: 134 WTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSLNLVGFCAYAIFNL 180


>Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical
           protein C41C4.7a protein.
          Length = 404

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 642 WNLFFAFSISSLVDFSPSFKPYIIMLLPFLSLSKNSIFFSKFSTLNI 502
           W  FFA+SIS       +FK   ++ L F  LS N + F  ++  N+
Sbjct: 134 WTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSLNLVGFCAYAIFNL 180


>AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical
           protein Y51A2A.5 protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 327 YQLLLNYVLSYAEKWMXXXXXXXXXXXSKCRTKPFLYPI 443
           Y++L NY++SY +               +CRT  F+ P+
Sbjct: 88  YEILKNYIISYIQDMEESKELYFAGIVDRCRTDIFIQPM 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,723,180
Number of Sequences: 27780
Number of extensions: 328367
Number of successful extensions: 831
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)