Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31408
         (357 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    26   0.48 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   2.6  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   6.0  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    22   7.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    22   7.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   7.9  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    22   7.9  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
            protein.
          Length = 1087

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +1

Query: 19   HLVGPSSNSCSRTP*TNTTTMADDEAKKANQAEIDRKRAVVRKRMVEASKAKKANK 186
            HL+   S+  +R+P T      +DE K    A +  KRA     +  A+ A K  +
Sbjct: 1007 HLLSDQSDPFNRSPLTMEQVKRNDELKAKIDAWMREKRASHAATLAAAAAATKGGE 1062


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +1

Query: 85  DDEAKKANQAEIDRKRAVVRKRMVEASKAKKANKG 189
           +++ ++ NQ + + +  + RK+ +E SKAK+   G
Sbjct: 255 EEKEQQYNQFKQEMEAILARKKELETSKAKQVAIG 289


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 159 GLQSQKGEQGF 191
           GL+ QKGE+GF
Sbjct: 518 GLKGQKGERGF 528


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
          protein.
          Length = 755

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 1  GSCWLNHLVGPSSN 42
          GS W +HL  P SN
Sbjct: 48 GSWWSSHLTEPPSN 61


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
          protein.
          Length = 753

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 1  GSCWLNHLVGPSSN 42
          GS W +HL  P SN
Sbjct: 48 GSWWSSHLTEPPSN 61


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 28   GPSSNSCSRTP*TNTTTMADDEAKKANQAEIDRKR 132
            G S  +CSR P  +     DDE+     ++I R +
Sbjct: 2483 GSSQRNCSRGPPCSPGLDYDDESHAKYVSDIGRSK 2517


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 84  RHCCCVGLGC 55
           +HCCC G  C
Sbjct: 286 QHCCCRGSHC 295


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,180
Number of Sequences: 2352
Number of extensions: 2470
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)