Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31408
         (357 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U08377-1|AAA19604.1|  951|Homo sapiens protein ( Human homolog o...    28   7.4  
BC015953-1|AAH15953.1|  760|Homo sapiens SFRS8 protein protein.        28   7.4  
BC008707-1|AAH08707.1|  760|Homo sapiens SFRS8 protein protein.        28   7.4  
AB208921-1|BAD92158.1|  636|Homo sapiens SFRS8 protein variant p...    28   7.4  

>U08377-1|AAA19604.1|  951|Homo sapiens protein ( Human homolog of
           Drosophila splicing regulator
           suppressor-of-white-apricot mRNA, complete cds. ).
          Length = 951

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 76  TMADDEAKKANQAEIDRKRAVVRKRMVEASKAKK 177
           T  + EAK+A Q   DR  A  R+++ +ASK  K
Sbjct: 642 TQEELEAKQAKQKLEDRLAAAAREKLAQASKESK 675


>BC015953-1|AAH15953.1|  760|Homo sapiens SFRS8 protein protein.
          Length = 760

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 76  TMADDEAKKANQAEIDRKRAVVRKRMVEASKAKK 177
           T  + EAK+A Q   DR  A  R+++ +ASK  K
Sbjct: 642 TQEELEAKQAKQKLEDRLAAAAREKLAQASKESK 675


>BC008707-1|AAH08707.1|  760|Homo sapiens SFRS8 protein protein.
          Length = 760

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 76  TMADDEAKKANQAEIDRKRAVVRKRMVEASKAKK 177
           T  + EAK+A Q   DR  A  R+++ +ASK  K
Sbjct: 642 TQEELEAKQAKQKLEDRLAAAAREKLAQASKESK 675


>AB208921-1|BAD92158.1|  636|Homo sapiens SFRS8 protein variant
           protein.
          Length = 636

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 76  TMADDEAKKANQAEIDRKRAVVRKRMVEASKAKK 177
           T  + EAK+A Q   DR  A  R+++ +ASK  K
Sbjct: 526 TQEELEAKQAKQKLEDRLAAAAREKLAQASKESK 559


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,778,104
Number of Sequences: 237096
Number of extensions: 400533
Number of successful extensions: 5302
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5302
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)