Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31408
(357 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 41 2e-04
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 41 2e-04
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 37 0.004
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 37 0.004
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 36 0.006
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 36 0.006
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 29 0.95
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 29 0.95
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 28 2.2
Z22181-2|CAA80180.1| 510|Caenorhabditis elegans Hypothetical pr... 26 6.7
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 88 DEAKKANQAEIDRKRAVVRKRMVEASKAKKANKGFM 195
DEA+K AE +RK+ VRKR+ EAS+ KKA KGF+
Sbjct: 7 DEARK--MAERERKKEEVRKRLEEASRMKKAKKGFL 40
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 88 DEAKKANQAEIDRKRAVVRKRMVEASKAKKANKGFM 195
DEA+K AE +RK+ VRKR+ EAS+ KKA KGF+
Sbjct: 7 DEARK--MAERERKKEEVRKRLEEASRMKKAKKGFL 40
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 85 DDEAKKANQAEIDRKRAVVRKRMVEASKAKKANKGFM 195
DD A+KA + E+ K+A VRKRM EA+K KGF+
Sbjct: 19 DDAARKAQEREL--KKAEVRKRMEEAAKKGSKKKGFL 53
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 85 DDEAKKANQAEIDRKRAVVRKRMVEASKAKKANKGFM 195
DD A+KA + E+ K+A VRKRM EA+K KGF+
Sbjct: 19 DDAARKAQEREL--KKAEVRKRMEEAAKKGSKKKGFL 53
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 85 DDEAKKANQAEIDRKRAVVRKRMVEASKAKKANKGFM 195
+D +KA AE + K+A VRKR+ EA KKA KGF+
Sbjct: 7 EDAQRKA--AEREAKKAEVRKRLEEAGNKKKAKKGFL 41
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 85 DDEAKKANQAEIDRKRAVVRKRMVEASKAKKANKGFM 195
+D +KA AE + K+A VRKR+ EA KKA KGF+
Sbjct: 7 EDAQRKA--AEREAKKAEVRKRLEEAGNKKKAKKGFL 41
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 43 SCSRTP*TNTTTMADDEAKKANQAEIDRKRAVVRKRMVEASKAKKANK 186
+C +P T T +AD+ ++ QAE+ K VV++ ++E + K
Sbjct: 1387 ACGASPDT-TVVIADEITEEEQQAEVLEKPRVVKEEVIEPGSQSETQK 1433
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 43 SCSRTP*TNTTTMADDEAKKANQAEIDRKRAVVRKRMVEASKAKKANK 186
+C +P T T +AD+ ++ QAE+ K VV++ ++E + K
Sbjct: 1401 ACGASPDT-TVVIADEITEEEQQAEVLEKPRVVKEEVIEPGSQSETQK 1447
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +1
Query: 88 DEAKKANQAEIDRKRAVVRKRMVEASKAKKANK 186
+ +K QAE++R+ + R+R++EA + ++ K
Sbjct: 338 ERQEKERQAEVERQAELERQRIIEAQREEEEKK 370
>Z22181-2|CAA80180.1| 510|Caenorhabditis elegans Hypothetical
protein ZK632.3 protein.
Length = 510
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 13 LNHLVGPSSNSCSRTP*TNTTTMADDEAKKANQAEIDRKRAVVR 144
L+ + G +S S + P NT M D+E A Q DR+ V R
Sbjct: 55 LDQMFGDTSVSDDQLP-INTEGMTDEEVALALQRHFDREADVAR 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,477,967
Number of Sequences: 27780
Number of extensions: 58949
Number of successful extensions: 245
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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