Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31406
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.45 
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   2.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 429 SFEGANENVWHVLEVHPSSPAELAGLRPFSD 521
           SF G N+  W VL + P    +  G R F++
Sbjct: 57  SFIGVNDADWSVLVIDPELDVDQNGFRNFTN 87


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +1

Query: 373 HQVLTGVAKDCLVLVSDFAPSKAPMKMCGMYWKYIHHLQQN*LALDHSLI 522
           ++    + K    + SD       +K+   Y  +++H+  N  ALD  LI
Sbjct: 113 NEAFASLRKSIPTMPSDKLSKIQTLKLAARYIDFLYHVLSNENALDVDLI 162


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 466 NTCHTFSLAPSKEQNLILTPSNPWPPQLALGVIITSL 356
           NTC     A  + Q+ IL     W P+L +G++ ++L
Sbjct: 69  NTCGEVFSAWVRCQDQILIFLVNWYPRLIIGIMNSTL 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,862
Number of Sequences: 336
Number of extensions: 3618
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)