Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31405
         (770 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3FQR5 Cluster: Putative uncharacterized protein; n=3; ...    34   3.4  
UniRef50_UPI00006CA448 Cluster: hypothetical protein TTHERM_0049...    34   4.5  
UniRef50_UPI00015976D9 Cluster: hypothetical protein RBAM_017400...    33   7.9  
UniRef50_A2D8I7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_A3FQR5 Cluster: Putative uncharacterized protein; n=3;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 1330

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = +1

Query: 13  NVFPSHSLINIRKKVLGLIVDLVRLTSALYIYCESD*THHVRTLVCSN*IL*LVKYFTTS 192
           N+  +HS  N+R  VL  I  +  +TSALYI  +      +R L+CSN     +K     
Sbjct: 290 NLLLTHSDNNVRYIVLNKISKITGITSALYILQKFFVKDILRVLLCSNCYSLQIKVIQIV 349

Query: 193 LLIVNANKNLYNVFNLL 243
           L  +    N  ++F  L
Sbjct: 350 LSSLLTKNNCLDIFQFL 366


>UniRef50_UPI00006CA448 Cluster: hypothetical protein
           TTHERM_00497080; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00497080 - Tetrahymena
           thermophila SB210
          Length = 1797

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 605 FIKHIASSNYTNFNQTIESTIIKAGNVTFGQ-LLVNQKNELLTLYSIGSHKTLLNDIL 435
           +I  +  + ++++   I  T   +G   F Q LL+N +NE + L+ IGS+K + N IL
Sbjct: 133 YISALKVNFFSSYQNLIFLTTTYSGIYVFEQMLLLNNQNEQVFLFEIGSYKQMQNTIL 190


>UniRef50_UPI00015976D9 Cluster: hypothetical protein RBAM_017400;
           n=1; Bacillus amyloliquefaciens FZB42|Rep: hypothetical
           protein RBAM_017400 - Bacillus amyloliquefaciens FZB42
          Length = 140

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 581 NYTNFNQTIESTIIKAGNVTFGQLLVNQKNELLTLYSIGS 462
           NY N N  + ST + AG     +  VNQK E +  Y  G+
Sbjct: 88  NYPNGNTLLSSTTLNAGKTFIQEFSVNQKGEYILKYDSGT 127


>UniRef50_A2D8I7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 512

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 18/60 (30%), Positives = 34/60 (56%)
 Frame = -1

Query: 608 SFIKHIASSNYTNFNQTIESTIIKAGNVTFGQLLVNQKNELLTLYSIGSHKTLLNDILDK 429
           +F+  + + +YT     +E  +++ G     Q LVN+ N+ LTL+S+ +  T+L D  +K
Sbjct: 51  TFLMAVQNLDYTIDEHNVED-LLRLGTEWGVQSLVNEVNKFLTLHSVQNSATILIDNYEK 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,287,852
Number of Sequences: 1657284
Number of extensions: 11842407
Number of successful extensions: 21003
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21003
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)