Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31405
         (770 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20108| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_55804| Best HMM Match : Acyl_transf_1 (HMM E-Value=1.2e-07)         31   1.0  
SB_34188| Best HMM Match : Astacin (HMM E-Value=0)                     29   3.1  
SB_10518| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.3  
SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.6  

>SB_20108| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 610

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +2

Query: 326 NVIDMSIQIALNIIVSFKEYGSKPALNKVLT*PVIYLRCRSEEFCDCQWNTKS 484
           N+ DM   +  +I+ S K              PV+Y+RC   ++C   W+ KS
Sbjct: 327 NLKDMRDNLHHDIVTSRKRQDEWEPAKVQYEGPVLYIRCEDPKYCPVLWHYKS 379


>SB_55804| Best HMM Match : Acyl_transf_1 (HMM E-Value=1.2e-07)
          Length = 1306

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +2

Query: 326  NVIDMSIQIALNIIVSFKEYGSKPALNKVLT*PVIYLRCRSEEFCDCQWNTKS 484
            N+ DM   +  +I+ S K              PV+Y+RC   ++C   W+ KS
Sbjct: 1096 NLKDMRDNLHHDIVTSRKRQDEWEPAKVQYEGPVLYIRCEDPKYCPVLWHYKS 1148


>SB_34188| Best HMM Match : Astacin (HMM E-Value=0)
          Length = 844

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +1

Query: 184 TTSLLIVNA-NKNLYNVFNLLSVTLV*HYTLIIELSIIKSGNLCIWTKKCY*YVNTDCFE 360
           TTS +  N   KN       +  T++  Y + +    + SG    W K  Y   N  CFE
Sbjct: 707 TTSNMTTNIITKNTITTIRAIRTTILSWYFVHLASDYLTSGQKARWQKAGYQATNAACFE 766

Query: 361 Y 363
           +
Sbjct: 767 F 767


>SB_10518| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 328

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 299 VAICAFGQKNVIDMSIQIALNIIVSFKEYGSKPAL 403
           V I +FG K    +S  +  N+++SF + G KP L
Sbjct: 157 VGIVSFGDKTKQILSRTLGKNMLMSFMDVGKKPPL 191


>SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1044

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = -3

Query: 594 HSLFK-LHKF*SNN*VDYYQSR-QCDFWTIIGKSEKRIID 481
           HSL + LH   S+N V+ YQ   +CD+  + GK+ + ++D
Sbjct: 408 HSLLRRLHNNFSDNFVNKYQREGKCDYSIVCGKAAEFLVD 447


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,896,041
Number of Sequences: 59808
Number of extensions: 368564
Number of successful extensions: 497
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)