Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31404
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81146-7|CAB03523.2|  517|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z81146-7|CAB03523.2|  517|Caenorhabditis elegans Hypothetical
           protein K10D11.4 protein.
          Length = 517

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -1

Query: 468 FSLVPEAKAELKIVQNFPLKEVYVLLSILNLSFVGIENFHFFIHSG 331
           FS+VP       IVQ+  + E    +S LNL+  G+E  H    SG
Sbjct: 253 FSIVPIPSHHHVIVQDASMYENISQISSLNLNEFGVEVVHLNASSG 298


>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
           protein C33E10.6 protein.
          Length = 1014

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = -1

Query: 411 KEVYVLLSILNLSFVGIENFHFFI---HSGSEFDI 316
           K +YV LSIL+LS   +  FH+ +   H G++ D+
Sbjct: 834 KPIYVALSILDLSKTIMYEFHYDVMKKHFGNKIDL 868


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,872,119
Number of Sequences: 27780
Number of extensions: 308911
Number of successful extensions: 550
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)