Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31403
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    26   0.90 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.2  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   4.8  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   4.8  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   4.8  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   6.4  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = +2

Query: 368 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN---SQVNDLRGKFVKPTLKKVSK 538
           +K+VC  YH  +    +E  + E +++     I DL     Q  D R + +    K+V  
Sbjct: 228 VKKVCAGYHASLYPCPNEYNEREEMLRGVRTRIEDLKMVLGQTQDQRQRVLLNVAKEVPN 287

Query: 539 YE 544
           +E
Sbjct: 288 WE 289


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +1

Query: 448  KERYGDLRPELPSQRPQRQIRQAHTKEGF-QIRKQIRQAPEEGRR 579
            +E+ G+ RP +PS  P+   R+A+ +    ++R++ RQ  ++ RR
Sbjct: 1067 EEQCGE-RPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDERR 1110


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = +2

Query: 329  GKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKF 508
            G+ +  + A + T K +     +R   L ++   L     R++   S+ NS+  ++  +F
Sbjct: 1149 GRYEARNPAYQRTTKDLFSGNQQRTQELVNQNETLSCYTSRRNSTTSNANSEPQEVAPQF 1208

Query: 509  VKPTLKKVSKY 541
            VK   +  SKY
Sbjct: 1209 VK-FARDSSKY 1218


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
 Frame = +2

Query: 338 KNIDDANEDTI-----KRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 502
           K + DA +D +     K V    H+++ R E  K DL       +++  + + +  +   
Sbjct: 272 KALKDAKKDVVTAKDEKSVLATEHQQLLR-EKTKLDLTISDLSDEVQGDNKSKERAEQEL 330

Query: 503 KFVKPTL----KKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLGRGR 643
           + +K T+    K++ +   ++  +++K  E +    LK  K+KE    +GR
Sbjct: 331 ERLKITIAEKEKELEQVRPRYEAMRRKEEECSRELNLKEQKRKELYAKQGR 381


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +1

Query: 469 RPELPSQRPQRQ----IRQAHTKEGFQIRKQIRQAPE 567
           RP+  + RP RQ    +     K  +Q+ KQIR+APE
Sbjct: 235 RPQ--TTRPNRQDIIEVTSFTGKMWYQVYKQIREAPE 269


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 481 PSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQ 585
           P Q+ QRQ +Q H +   Q ++Q +Q  ++ ++ Q
Sbjct: 217 PQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQ 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,078
Number of Sequences: 2352
Number of extensions: 7646
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)