Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31403
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.095
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.095
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 31 0.88
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 29 2.0
At4g15870.1 68417.m02412 terpene synthase/cyclase family protein 29 2.0
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.0
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 29 2.0
At1g76740.1 68414.m08931 expressed protein weak similarity to fi... 29 2.0
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 29 2.7
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 4.7
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 4.7
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 6.2
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 28 6.2
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 6.2
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 27 8.2
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.095
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 338 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 517
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 518 TLKKVSKYENKF 553
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.095
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 338 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 517
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 518 TLKKVSKYENKF 553
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +2
Query: 395 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 574
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 575 AEFNFRNQLKVVKK 616
E + NQ + +K+
Sbjct: 138 GENSRGNQKRKMKR 151
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +2
Query: 395 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 511
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII 917
>At4g15870.1 68417.m02412 terpene synthase/cyclase family protein
Length = 598
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -1
Query: 648 LCLPLPKVNSFFFTTFNWLRKLNSAAFFWSLANLFSYLETFFSVGLTNLPLRSLTWEFRS 469
+ L K+N F F NW+++L + +W +L S L +F L L ++ F
Sbjct: 284 MLLRFAKIN-FKFLQLNWIQELKTLTKWWKQQDLASKLPPYFRDRLIECYLFAIMIYFEP 342
Query: 468 EISI 457
+ S+
Sbjct: 343 QFSL 346
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 332 KPKNIDDANEDTIKRVCKDYHERIARLED 418
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +2
Query: 356 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 535
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 536 KYENKFAKLQKKAAE---FNFRNQLKVVKKK 619
+ + F L +K AE N NQ +++++
Sbjct: 275 EVDIIFKDLVEKEAELADLNKFNQTLILRER 305
>At1g76740.1 68414.m08931 expressed protein weak similarity to
fimbriae-associated protein Fap1 (GI:3929312)
[Streptococcus parasanguinis]; weak similarity to 1MDa_1
protein (GI:24620455) [Caenorhabditis elegans]
Length = 1532
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = +2
Query: 377 VCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFA 556
V E + R E + +R +D+N ++ K VKP KV K +
Sbjct: 280 VVSSQKELVERKAKEPLVDSKVPRRSKRLANDVNVLLDKRPVKAVKPDYLKVKKAPKQSR 339
Query: 557 KLQKKAAEFNFRNQLKVVKKKEFTLGRGRQ 646
+L+K +E Q + K+ T G GR+
Sbjct: 340 RLEKSLSELLIDGQAQKGDKQR-TFGNGRE 368
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +2
Query: 338 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 502
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD--- 284
Query: 503 KFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL 601
K LK+ +KF++ QK ++F ++L
Sbjct: 285 --QKKLLKEQKDAIDKFSEDQKLMKRWSFGSKL 315
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 285 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 446
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 342 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 461
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 443 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 580
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 401 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 520
++ L K L ++++KD EIS+ NS + K VK T
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLT 156
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 362 DTIKRVCKDYHERIARLEDEKFDLEYIV 445
+T ++C+ Y E A + KFDL Y+V
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVV 701
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/98 (20%), Positives = 43/98 (43%)
Frame = +2
Query: 359 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 538
++ +KR+ + H +A+ + LE + EI+ L+ +++L + S+
Sbjct: 2307 DEEMKRILDEKHMDLAQAKKHIEALERNTADQKTEITQLSEHISELN----LHAEAQASE 2362
Query: 539 YENKFAKLQKKAAEFNFRNQLKVVKKKEFTLGRGRQRG 652
Y +KF +L+ A + + + G G+ RG
Sbjct: 2363 YMHKFKELEAMAEQVKPEIHVSQAIDSSLSKGSGKPRG 2400
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,692,531
Number of Sequences: 28952
Number of extensions: 174037
Number of successful extensions: 617
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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