Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31402
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001833-1|AAN71588.1|  263|Drosophila melanogaster RH48616p pro...    30   3.5  
AE014296-1181|AAF50619.1|  263|Drosophila melanogaster CG14823-P...    30   3.5  
BT015210-1|AAT94439.1|  462|Drosophila melanogaster RE57622p pro...    29   6.2  
AE014298-2831|AAF48946.2|  462|Drosophila melanogaster CG8028-PA...    29   6.2  

>BT001833-1|AAN71588.1|  263|Drosophila melanogaster RH48616p
           protein.
          Length = 263

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
 Frame = -2

Query: 282 WVQRMALSCSRLHGNTSCLFVLSLAVLRAVQAELHQCHH--RRDLQILPLGRIKLITQN* 109
           W +R    C+R   +T  +F+  L ++ A+   L Q HH  R  + +   G+++++ ++ 
Sbjct: 49  WTRRSC--CTRQVLSTGAIFIALLLIIGAIYMHLRQKHHLGRLHINLKDRGQVEVLEEDF 106

Query: 108 SYST----DERTETICT 70
              T    D +T TI T
Sbjct: 107 PMVTAAGVDAQTSTITT 123


>AE014296-1181|AAF50619.1|  263|Drosophila melanogaster CG14823-PA,
           isoform A protein.
          Length = 263

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
 Frame = -2

Query: 282 WVQRMALSCSRLHGNTSCLFVLSLAVLRAVQAELHQCHH--RRDLQILPLGRIKLITQN* 109
           W +R    C+R   +T  +F+  L ++ A+   L Q HH  R  + +   G+++++ ++ 
Sbjct: 49  WTRRSC--CTRQVLSTGAIFIALLLIIGAIYMHLRQKHHLGRLHINLKDRGQVEVLEEDF 106

Query: 108 SYST----DERTETICT 70
              T    D +T TI T
Sbjct: 107 PMVTAAGVDAQTSTITT 123


>BT015210-1|AAT94439.1|  462|Drosophila melanogaster RE57622p
           protein.
          Length = 462

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 250 PSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSP 152
           P+ +  L  C  PGST  C    P+  P+KGSP
Sbjct: 394 PASRRSLDFCA-PGSTFHCLWSLPTTCPRKGSP 425


>AE014298-2831|AAF48946.2|  462|Drosophila melanogaster CG8028-PA
           protein.
          Length = 462

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 250 PSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSP 152
           P+ +  L  C  PGST  C    P+  P+KGSP
Sbjct: 394 PASRRSLDFCA-PGSTFHCLWSLPTTCPRKGSP 425


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,551,510
Number of Sequences: 53049
Number of extensions: 679364
Number of successful extensions: 1991
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1991
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)