Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31401
         (553 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...   133   3e-30
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...   129   4e-29
UniRef50_A7S562 Cluster: Predicted protein; n=1; Nematostella ve...    34   1.9  
UniRef50_UPI0000DA1A5E Cluster: PREDICTED: hypothetical protein;...    32   7.7  

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score =  133 bits (321), Expect = 3e-30
 Identities = 70/126 (55%), Positives = 75/126 (59%)
 Frame = +3

Query: 165 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSX 344
           P    EGEGDPEFIKRQDQKRSDLD+QLKEYI EWRKQR+            QAKRKV+ 
Sbjct: 26  PQTPAEGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVTR 85

Query: 345 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPN 524
                                       +IEEKR RLEEAEKKRQAMLQAMKD  K GPN
Sbjct: 86  AEEEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPN 145

Query: 525 FTMQKK 542
           FT+ KK
Sbjct: 146 FTIAKK 151


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score =  129 bits (312), Expect = 4e-29
 Identities = 69/128 (53%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +3

Query: 162 TPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVS 341
           T    +EG GDPEFIKRQDQKRSDLDEQL+EYI EWRKQRA            QAKRK+S
Sbjct: 26  TTTKVEEGAGDPEFIKRQDQKRSDLDEQLREYITEWRKQRAKEEDELKKLKEKQAKRKIS 85

Query: 342 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKT-G 518
                                        DIEEKRQRLEEAEKKRQAM+QA+KD +K  G
Sbjct: 86  RAEEERKMAERKKQEEERRIREIEEKKQRDIEEKRQRLEEAEKKRQAMMQALKDQNKNKG 145

Query: 519 PNFTMQKK 542
           PNFT+ K+
Sbjct: 146 PNFTITKR 153


>UniRef50_A7S562 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 423

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 15/25 (60%), Positives = 21/25 (84%)
 Frame = +3

Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDA 506
           +EE+R+RLE  EK+RQA  QAM++A
Sbjct: 140 LEEERKRLENLEKERQAAQQAMQEA 164


>UniRef50_UPI0000DA1A5E Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 114

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = -2

Query: 129 QSQNIPPRQTCWLFIECRTGRSRSLSHSALVLGPAAQRR 13
           +S+N   RQ CWLF E RTG+ R    ++L L P  QRR
Sbjct: 33  ESRNRKSRQFCWLFPE-RTGQ-RDYIKASLGLWPCLQRR 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,436,239
Number of Sequences: 1657284
Number of extensions: 5308603
Number of successful extensions: 20386
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20344
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)