Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31399
         (807 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.94 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.8  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   8.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +2

Query: 494 EDITTRHIFSYKILSCDE--CAMAGTLKDRSPGL 589
           E+  TRH+   +I+ CD+    +AG + +   GL
Sbjct: 250 EEYVTRHLIDGRIIGCDQRISFIAGYMTEEVSGL 283


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 716 YTNNIISTVLYNFLPLTVHTKVRLIY 793
           + N  + T  YNF   T+H+K+  +Y
Sbjct: 414 FFNIFLITPFYNFNENTIHSKLCKLY 439


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 758 PLTVHTKVRLIYCKT 802
           P+ + TKV L+YC +
Sbjct: 117 PVKIRTKVYLVYCSS 131


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/65 (20%), Positives = 31/65 (47%)
 Frame = -2

Query: 452 AVIVFRVHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVF 273
           +++   +  ++  FS +TV+  +   +++ C+L +K      LV    TF      +L +
Sbjct: 63  SIVAMVMGTIVNAFSCYTVLAPVLCKRQQYCQLMSKLLGNHQLVYNCHTFGRFLAPNLTY 122

Query: 272 VFLCL 258
           + + L
Sbjct: 123 LLVAL 127



 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -2

Query: 434 VHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQ 315
           ++ VL ++ DF+     +  K  + ++     T F+++IQ
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQ 342


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 758 PLTVHTKVRLIYCKT 802
           P+ + TKV L+YC +
Sbjct: 113 PVKIRTKVYLVYCSS 127


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 134 PWRSPESAQLKPHTGNH 184
           PW +    Q+K  +GNH
Sbjct: 141 PWFAEHMGQIKVASGNH 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,457
Number of Sequences: 336
Number of extensions: 3942
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)