Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31396
(483 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 235 4e-61
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 228 4e-59
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 193 2e-48
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 186 3e-46
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 185 4e-46
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 173 2e-42
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 158 7e-38
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 157 9e-38
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 153 2e-36
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 126 3e-28
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 117 1e-25
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 98 8e-20
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 98 1e-19
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 97 1e-19
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 89 4e-17
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 89 4e-17
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 88 8e-17
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 85 8e-16
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 80 2e-14
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 78 9e-14
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 78 1e-13
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 72 8e-12
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 70 3e-11
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 66 3e-10
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 65 7e-10
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 62 8e-09
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 49 5e-05
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 48 1e-04
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 46 6e-04
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 45 0.001
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 44 0.002
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 44 0.002
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 44 0.002
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 41 0.013
UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 41 0.017
UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellula... 40 0.022
UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultu... 40 0.029
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 40 0.039
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 40 0.039
UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3; Mycopla... 40 0.039
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 40 0.039
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 39 0.051
UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9; Rickett... 39 0.068
UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11; Bacter... 39 0.068
UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 38 0.16
UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellula... 37 0.21
UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5; Bacteri... 37 0.21
UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2; Alphapr... 37 0.27
UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellula... 37 0.27
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 36 0.48
UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9; Bacteri... 36 0.63
UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4; Plancto... 35 0.84
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 35 1.1
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 35 1.1
UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17; ... 35 1.1
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 35 1.1
UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1; Leptosp... 34 1.5
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 34 1.5
UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52; Bacter... 34 1.5
UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 34 1.5
UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2; Bacte... 34 1.5
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 34 1.9
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 34 1.9
UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;... 33 2.6
UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3; Rhodoba... 33 2.6
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 2.6
UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA methyl... 33 2.6
UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22; Bacter... 33 2.6
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 33 2.6
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 33 2.6
UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19; Alphap... 33 4.5
UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin CG... 32 7.8
UniRef50_Q9VHN4 Cluster: CG8043-PA; n=3; Sophophora|Rep: CG8043-... 32 7.8
UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1; D... 32 7.8
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 32 7.8
UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144; Bacte... 32 7.8
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 235 bits (575), Expect = 4e-61
Identities = 111/131 (84%), Positives = 119/131 (90%)
Frame = +2
Query: 5 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRI 184
KAFQKQ VFL K K K +R +K+VGLGFKTPR+AIEGTYIDKKCPFTGNVSIRGRI
Sbjct: 50 KAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 108
Query: 185 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECX 364
LTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDVEIGD+VT+GEC
Sbjct: 109 LTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVGECR 168
Query: 365 PLSKTVRFNVL 397
PLSKTVRFNVL
Sbjct: 169 PLSKTVRFNVL 179
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Frame = +2
Query: 5 KAFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRQ 115
++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPR+
Sbjct: 7 RSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 228 bits (558), Expect = 4e-59
Identities = 106/136 (77%), Positives = 121/136 (88%), Gaps = 5/136 (3%)
Frame = +2
Query: 5 KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVS 169
+A+QKQ T+F N+K + K K R++KN+GLGFKTP++AIEGTYIDKKCPFTGNVS
Sbjct: 8 RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67
Query: 170 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
IRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68 IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127
Query: 350 IGECXPLSKTVRFNVL 397
+GEC PLSKTVRFNVL
Sbjct: 128 VGECRPLSKTVRFNVL 143
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 193 bits (471), Expect = 2e-48
Identities = 88/131 (67%), Positives = 107/131 (81%)
Frame = +2
Query: 5 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRI 184
+AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+I
Sbjct: 11 RAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKI 70
Query: 185 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECX 364
LTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR V++GDIVT+G+C
Sbjct: 71 LTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVGQCR 129
Query: 365 PLSKTVRFNVL 397
P+SKTVRFNV+
Sbjct: 130 PISKTVRFNVV 140
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 186 bits (452), Expect = 3e-46
Identities = 87/135 (64%), Positives = 104/135 (77%), Gaps = 3/135 (2%)
Frame = +2
Query: 2 RKAFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSI 172
++AFQKQ +F N K + +K +R+ K VGLGFK P+ AIEG YIDKKCPFTGNVS+
Sbjct: 36 QRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVSV 95
Query: 173 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 352
RG IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V+ GDIV
Sbjct: 96 RGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVVC 155
Query: 353 GECXPLSKTVRFNVL 397
G+C PLSKTVRFNVL
Sbjct: 156 GQCRPLSKTVRFNVL 170
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 185 bits (451), Expect = 4e-46
Identities = 85/131 (64%), Positives = 104/131 (79%)
Frame = +2
Query: 5 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRI 184
+AFQKQ +F N K G R R +K+VGLGFKTP +AI G Y+DKKCPF G VSIRGRI
Sbjct: 11 RAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRI 67
Query: 185 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECX 364
LTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR + GD+VT+G+C
Sbjct: 68 LTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVGQCR 126
Query: 365 PLSKTVRFNVL 397
PLSKTVRFNVL
Sbjct: 127 PLSKTVRFNVL 137
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 173 bits (421), Expect = 2e-42
Identities = 82/134 (61%), Positives = 103/134 (76%), Gaps = 5/134 (3%)
Frame = +2
Query: 11 FQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRG 178
+QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGNVSIRG
Sbjct: 11 YQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRG 70
Query: 179 RILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 355
RIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP DV+ GD VT+G
Sbjct: 71 RILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGDTVTVG 129
Query: 356 ECXPLSKTVRFNVL 397
EC PLSKTVRFNVL
Sbjct: 130 ECRPLSKTVRFNVL 143
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 158 bits (383), Expect = 7e-38
Identities = 69/115 (60%), Positives = 87/115 (75%)
Frame = +2
Query: 53 MKRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 232
+ +K KN+G+G K P +AI Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 233 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
RRDYLH++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+C PLSKT+RFNVL
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVL 129
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 157 bits (382), Expect = 9e-38
Identities = 71/120 (59%), Positives = 92/120 (76%)
Frame = +2
Query: 38 NRKGGMKRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 217
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 218 RTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
RTI+IRR+YLH++ KY R++KRH++++VH SP F D + GD V IG+C PLSKT+R+NVL
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYNVL 123
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 153 bits (372), Expect = 2e-36
Identities = 86/160 (53%), Positives = 103/160 (64%), Gaps = 29/160 (18%)
Frame = +2
Query: 5 KAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVS 169
KAF KQ VFL+ +K G +K R K++GLGFKTPR+AIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 170 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN------------------------RFE 277
IRGRI+ G KM RTI++RR+YLH++ KY R+E
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDLGCRYE 126
Query: 278 KRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
KRH N+ H+SPCFR V+ GD V IG+C PLSKTVRFNVL
Sbjct: 127 KRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVL 165
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 126 bits (303), Expect = 3e-28
Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = +2
Query: 5 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRI 184
K F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 185 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGEC 361
GVV+KMK ++TIV+ +Y+HY KY R+ +RH N SVH+SPCF + +GD V GE
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGET 127
Query: 362 XPLSKT 379
PLSKT
Sbjct: 128 RPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 117 bits (282), Expect = 1e-25
Identities = 53/88 (60%), Positives = 68/88 (77%)
Frame = +2
Query: 134 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 313
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 314 CFRDVEIGDIVTIGECXPLSKTVRFNVL 397
++GDIV I EC P+SKTVRFNV+
Sbjct: 83 LL-TCKVGDIVIIAECRPISKTVRFNVI 109
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 98.3 bits (234), Expect = 8e-20
Identities = 39/87 (44%), Positives = 61/87 (70%)
Frame = +2
Query: 137 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 316
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Query: 317 FRDVEIGDIVTIGECXPLSKTVRFNVL 397
DV +GD V I EC PLSKT+ F V+
Sbjct: 79 IGDVNVGDSVRIMECRPLSKTITFCVI 105
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 97.9 bits (233), Expect = 1e-19
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = +2
Query: 38 NRKGGMKRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 217
N +G K R KN+GLGFKTPR+AI+G Y+DKKCPFTG VSIRGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 218 RTIVIRRDYLHYL 256
TI++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 97.5 bits (232), Expect = 1e-19
Identities = 48/111 (43%), Positives = 66/111 (59%)
Frame = +2
Query: 65 DMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 244
+ R K++GLG K PR+ + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 245 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
Y KY R+E+R + H PC D + GD V I EC PLSKT F V+
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVI 109
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 89.4 bits (212), Expect = 4e-17
Identities = 43/106 (40%), Positives = 60/106 (56%)
Frame = +2
Query: 80 KNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 259
+++GL P + + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 260 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
KY R+EKR + H C ++GDIVTI EC P+SKT F V+
Sbjct: 59 KYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSFVVV 103
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 89.4 bits (212), Expect = 4e-17
Identities = 40/87 (45%), Positives = 58/87 (66%)
Frame = +2
Query: 137 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 316
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 317 FRDVEIGDIVTIGECXPLSKTVRFNVL 397
V+ GD+V IGE P+SKTV+F VL
Sbjct: 84 I-SVKEGDVVVIGETMPISKTVKFTVL 109
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 88.2 bits (209), Expect = 8e-17
Identities = 41/89 (46%), Positives = 55/89 (61%)
Frame = +2
Query: 113 QAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRN 292
Q E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY+RF KR
Sbjct: 8 QEPEETCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKYDRFMKRRSR 67
Query: 293 MSVHLSPCFRDVEIGDIVTIGECXPLSKT 379
+ H C D+ +GD VTI EC PLSKT
Sbjct: 68 VPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 85.0 bits (201), Expect = 8e-16
Identities = 43/106 (40%), Positives = 67/106 (63%)
Frame = +2
Query: 80 KNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 259
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 260 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
KY R+ ++ RN+ HL C + V +GD V IGE PL+K + F VL
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 80.2 bits (189), Expect = 2e-14
Identities = 38/106 (35%), Positives = 60/106 (56%)
Frame = +2
Query: 80 KNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 259
+N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 260 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
KY R + + VH+ C + ++ GD V EC L+KT+ F ++
Sbjct: 60 KYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISFVIV 104
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 78.2 bits (184), Expect = 9e-14
Identities = 38/106 (35%), Positives = 65/106 (61%)
Frame = +2
Query: 80 KNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 259
KN+G+ P ++ D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 260 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
KYNR+E+R + M V + C +V+ GD V I E PLSKT+ + V+
Sbjct: 61 KYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTIAWVVI 105
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 77.8 bits (183), Expect = 1e-13
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = +2
Query: 137 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 316
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 317 FRDVEIGDIVTIGECXPLSKTVRFNVL 397
+D++ GD V IGE PLSKT F VL
Sbjct: 76 LKDIKEGDYVLIGETRPLSKTKHFVVL 102
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 71.7 bits (168), Expect = 8e-12
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 80 KNVGL-GFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 256
+++G+ G K P + D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 257 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
KY R ++ + + PC + +IGDI+TI EC PL+K F V+
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSFVVI 103
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 69.7 bits (163), Expect = 3e-11
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = +2
Query: 137 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 316
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 317 FRDVEIGDIVTIGECXPLSKTVRFNVL 397
V+ GD V + E PL+K+V F V+
Sbjct: 81 I-PVKPGDEVIVAETRPLAKSVSFVVI 106
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 66.5 bits (155), Expect = 3e-10
Identities = 39/102 (38%), Positives = 56/102 (54%)
Frame = -3
Query: 403 NFQNIESNCFGQRXAFADRYNITNLHVPEARRQMHGHIPVPFLEPIVFG*VVKVIAADHD 224
NFQNIES+ F + NIT + E+ R + +I V F ++F V++VI++D+D
Sbjct: 61 NFQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGSNILVSFFVSVIFWNVMQVISSDND 119
Query: 223 SSLHLHFLNDAGEDAAADRNVTSEGTLLVNVGTLNRLSGSFE 98
++H N G+D +D N TSE T VNV T N FE
Sbjct: 120 GTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFE 161
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 65.3 bits (152), Expect = 7e-10
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +2
Query: 80 KNVGLGFKTP-RQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 256
+ +GL P R+A +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 257 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 397
K+ R+ + + H+ P DV GD V EC P++K+V F V+
Sbjct: 60 TKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSFVVV 105
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 61.7 bits (143), Expect = 8e-09
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 290 NMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRF 388
NMS+H S CFRDV IG IVT+GEC PLSKTVRF
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRF 66
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 49.2 bits (112), Expect = 5e-05
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 185 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECX 364
LTG+V KM +T+V+ + L P Y ++ KR + H + +IGD+V I E
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETR 63
Query: 365 PLSKTVRFNVL 397
PLSKT R+ V+
Sbjct: 64 PLSKTKRWRVV 74
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 48.0 bits (109), Expect = 1e-04
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
+I+TG V M +TI + D L PKY++F ++ R H + EIGDIV I E
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEE 61
Query: 359 CXPLSKTVRF 388
LSKT F
Sbjct: 62 SRKLSKTKAF 71
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 45.6 bits (103), Expect = 6e-04
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +2
Query: 179 RILTGVVQKMKMQR--TIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 352
++LTGVV KMQ+ T+++ R + H P Y + KR + H P ++GD+V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEI 59
Query: 353 GECXPLSKTVRFNVL 397
E P+SK RF VL
Sbjct: 60 IESRPISKRKRFRVL 74
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 44.8 bits (101), Expect = 0.001
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
R L G V KM +TI + PKY ++ KR + VH ++GDIV I +
Sbjct: 21 RTLIGQVVSDKMHKTITVLVSRKIKHPKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQ 78
Query: 359 CXPLSKT 379
C P+SKT
Sbjct: 79 CRPISKT 85
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
R+LTG V KM +T+ + D P Y +F +R + + H + GD+V I E
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAHDEE--NVCQTGDLVRIEE 61
Query: 359 CXPLSKTVRFNVL 397
C P+SK ++V+
Sbjct: 62 CAPISKRKTWSVV 74
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 43.6 bits (98), Expect = 0.002
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +2
Query: 167 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 346
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S EIGDIV
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSK--NKAEIGDIV 61
Query: 347 TIGECXPLSKT 379
E +SKT
Sbjct: 62 ECAESLKISKT 72
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 43.6 bits (98), Expect = 0.002
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +2
Query: 182 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 361
+L G+V + KMQ++IV+ + + Y +F R + VH + +V GDIV I EC
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNV--GDIVEITEC 64
Query: 362 XPLSKT 379
P+SKT
Sbjct: 65 RPISKT 70
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 41.1 bits (92), Expect = 0.013
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 179 RILTGVVQKMKMQRT--IVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 352
R + GVV K+ ++T +++ R +H P+Y + KR + +H +V++GD V
Sbjct: 5 REIQGVVVKIAGEKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVA 60
Query: 353 GECXPLSKTVRFNV 394
EC PLSK F +
Sbjct: 61 VECRPLSKRKSFRL 74
>UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 78
Score = 40.7 bits (91), Expect = 0.017
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
RIL G V K +T+V+R + P + +R + H ++GD+V+I E
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDEN--NQFKVGDLVSIEE 61
Query: 359 CXPLSKTVRFNVL 397
C P+SK R+ V+
Sbjct: 62 CAPISKDKRWTVV 74
>UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 -
Dehalococcoides sp. (strain CBDB1)
Length = 90
Score = 40.3 bits (90), Expect = 0.022
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 164 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 343
+ I+ + G V KM++TIV+ D + P Y + +R VH + +IGD+
Sbjct: 1 MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEK--NEAKIGDM 58
Query: 344 VTIGECXPLSK 376
+ I EC P+SK
Sbjct: 59 IEIVECRPISK 69
>UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultured
bacterium 562|Rep: 30S ribosomal protein S17 -
uncultured bacterium 562
Length = 95
Score = 39.9 bits (89), Expect = 0.029
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +2
Query: 167 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 346
S RIL+GVV K +TI ++ + P Y + K R VH IGD V
Sbjct: 3 STNPRILSGVVISDKADKTITVKIERKVKHPLYGKVMK--RATKVHAHDENNSAAIGDQV 60
Query: 347 TIGECXPLSKT 379
T+ EC P SK+
Sbjct: 61 TVKECRPFSKS 71
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 39.5 bits (88), Expect = 0.039
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 176 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 352
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD V I
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENF--CVTGDKVVI 81
Query: 353 GECXPLSKTVRFNV 394
P+S + V
Sbjct: 82 KSMLPISTMKHYYV 95
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 39.5 bits (88), Expect = 0.039
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 173 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 352
+ R + GVV M +++V+ + PKY +F ++ + H +GD VTI
Sbjct: 7 KARTMQGVVVSNGMDKSVVVMTNRYIKHPKYKKFVRKSTKVMAH--DADNACGVGDRVTI 64
Query: 353 GECXPLSK 376
EC P SK
Sbjct: 65 SECTPFSK 72
>UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3;
Mycoplasma|Rep: 30S ribosomal protein S17 - Mycoplasma
mobile
Length = 92
Score = 39.5 bits (88), Expect = 0.039
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = +2
Query: 173 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 352
R + LTGVV K +TIV+ D P Y + K + + H + ++GDIV I
Sbjct: 7 RRKALTGVVVSDKSSKTIVVAVDTFKKDPLYQKRFKSTKKFAAHDEK--EEAQMGDIVKI 64
Query: 353 GECXPLSKTVRFNV 394
PLSKT F +
Sbjct: 65 VGTRPLSKTKFFRL 78
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 39.5 bits (88), Expect = 0.039
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +2
Query: 185 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECX 364
L GVV KM +T+V++ D P Y + + + H + +GDIV I E
Sbjct: 17 LVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDE--HNECRVGDIVMIRETR 74
Query: 365 PLSKTVRFNVL 397
PLSKT R+ V+
Sbjct: 75 PLSKTKRWVVV 85
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 39.1 bits (87), Expect = 0.051
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +2
Query: 170 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
I+G+++T K TI++ R H PKY + KR + VH V++GD++
Sbjct: 11 IQGKVVTKAGDKSV---TILVERRVTH--PKYRKIVKRFKKYIVHDES--NAVKVGDMIE 63
Query: 350 IGECXPLSKTVRFNV 394
EC PLSK F++
Sbjct: 64 AIECRPLSKRKSFSL 78
>UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9;
Rickettsiales|Rep: 30S ribosomal protein S17 - Ehrlichia
canis (strain Jake)
Length = 83
Score = 38.7 bits (86), Expect = 0.068
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
++LTGVV K +TI + + Y + K+ +N VH + + GD+V I E
Sbjct: 13 KVLTGVVVATKCDKTIKVMVSRMVRHKTYKKIVKKRKNYVVHDE--YNKCKCGDVVKIQE 70
Query: 359 CXPLSKTVRFNVL 397
P+S T R+ V+
Sbjct: 71 HIPISATKRWIVI 83
>UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11;
Bacteria|Rep: 30S ribosomal protein S17 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 86
Score = 38.7 bits (86), Expect = 0.068
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
++ GVV KM++T+V+R + + P+Y + + + H V GD V I E
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE---LKVSEGDKVKIQE 66
Query: 359 CXPLSKTVRFNVL 397
PLSK R+ V+
Sbjct: 67 TRPLSKLKRWRVI 79
>UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 -
Symbiobacterium thermophilum
Length = 94
Score = 37.5 bits (83), Expect = 0.16
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +2
Query: 191 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPL 370
GVV KM +T+V+ + L P Y + +R + H ++GD V I E PL
Sbjct: 13 GVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDE--HNQCKVGDKVRIMETRPL 70
Query: 371 SKTVRFNVL 397
SK R+ V+
Sbjct: 71 SKEKRWRVV 79
>UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 - Gloeobacter
violaceus
Length = 83
Score = 37.1 bits (82), Expect = 0.21
Identities = 25/69 (36%), Positives = 34/69 (49%)
Frame = +2
Query: 191 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPL 370
G+V MQ+T+V+ + PKY + R R H ++GD V I E PL
Sbjct: 8 GLVVSDAMQKTVVVAVENRVPHPKYKKIVVRTRKFKAHDEE--NRCKVGDRVRILESPPL 65
Query: 371 SKTVRFNVL 397
SKT R+ VL
Sbjct: 66 SKTKRWVVL 74
>UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5;
Bacteria|Rep: 30S ribosomal protein S17 - Acidobacteria
bacterium (strain Ellin345)
Length = 101
Score = 37.1 bits (82), Expect = 0.21
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = +2
Query: 185 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECX 364
L G+V KMQ+TIV++ + Y R R + H + IGD V I E
Sbjct: 16 LIGLVVSTKMQKTIVVQVERQKSHAMYGRVISRRKRFYAHDEE--QTAHIGDYVRIEETR 73
Query: 365 PLSKTVRFNV 394
PLSK R+ +
Sbjct: 74 PLSKLKRWKL 83
>UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Parvularcula bermudensis HTCC2503
Length = 93
Score = 36.7 bits (81), Expect = 0.27
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
RIL G + K ++T+V+R D P + +R + H ++++G V I E
Sbjct: 4 RILQGPIVSDKGEKTVVVRVDRAFKHPLLAKVVRRSKRYHAHDES--NELKVGQRVLIRE 61
Query: 359 CXPLSKTVRFNVL 397
C P SK R+ V+
Sbjct: 62 CPPKSKLKRWEVV 74
>UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellular
organisms|Rep: 30S ribosomal protein S17 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 84
Score = 36.7 bits (81), Expect = 0.27
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 191 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPL 370
GVV KM +TI + + P Y +F + + H + IGD V I E PL
Sbjct: 11 GVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEK--NECGIGDTVRIMETRPL 68
Query: 371 SKTVRFNV 394
S+T R+ +
Sbjct: 69 SRTKRWRL 76
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 35.9 bits (79), Expect = 0.48
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +2
Query: 191 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPL 370
G V KMQ+TIV+ P Y R + + H +GD+V I EC PL
Sbjct: 16 GEVVSTKMQKTIVVEVSRRVPHPLYKRIIGKRKKFYAHDEE--GRANLGDVVRIIECRPL 73
Query: 371 SKTVRFNV 394
SK R+ +
Sbjct: 74 SKLKRWRL 81
>UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9;
Bacteria|Rep: 30S ribosomal protein S17 -
Corynebacterium efficiens
Length = 92
Score = 35.5 bits (78), Expect = 0.63
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
++ TG V KMQ+TIV+ + Y++ + ++ + H IGD+V I E
Sbjct: 15 KVRTGYVVSDKMQKTIVVELEDRKQHALYSKILRTNKKVKAHDEE--NIAGIGDLVRIEE 72
Query: 359 CXPLSKTVRFNVL 397
PLSK + ++
Sbjct: 73 TRPLSKDKNYRLI 85
>UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4;
Planctomycetaceae|Rep: 30S ribosomal protein S17 -
Rhodopirellula baltica
Length = 117
Score = 35.1 bits (77), Expect = 0.84
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
R++ G+V KM +T + L PKY ++ +R VH + +GD V I E
Sbjct: 4 RVVAGIVTSDKMSKTRRVEIARLVKHPKYKKYIRRRTVCHVHDEN--NESGVGDKVEIIE 61
Query: 359 CXPLSKTVRFNVL 397
PLSK R+ ++
Sbjct: 62 SEPLSKLKRWRLV 74
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 34.7 bits (76), Expect = 1.1
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIV-IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 355
+ L G+V + + +V + Y H L RF+KR + + H E+GD V I
Sbjct: 20 KTLQGIVIRTSPKTIMVEVETAYKHKLYA-KRFKKR-KKFNTHDEKNL--AEVGDFVKIA 75
Query: 356 ECXPLSKTVRFNVL 397
EC P+SKT F ++
Sbjct: 76 ECRPISKTKHFRLV 89
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 34.7 bits (76), Expect = 1.1
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
R LTG V K +T+ + L PKY R E+ + H P ++GD+V +
Sbjct: 33 RQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DP-DNQFKVGDVVELQP 90
Query: 359 CXPLSKTVRF 388
P+SKT F
Sbjct: 91 SRPISKTKHF 100
>UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17;
n=23; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S17 - Guillardia theta (Cryptomonas phi)
Length = 90
Score = 34.7 bits (76), Expect = 1.1
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = +2
Query: 164 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 343
+SI+ R+ G+V KM +T+V+ +Y + + + VH P + ++GD+
Sbjct: 1 MSIKERL--GLVISDKMDKTVVVSIANRVTHKRYGKIVTKTKKYKVH-DPN-NNCQVGDL 56
Query: 344 VTIGECXPLSKTVRF 388
+ I E PLSKT R+
Sbjct: 57 ILINETRPLSKTKRW 71
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 34.7 bits (76), Expect = 1.1
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 107 PRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 286
P + ++ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 287 RNMS 298
R S
Sbjct: 159 RGKS 162
>UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1;
Leptospirillum sp. Group II UBA|Rep: 30S ribosomal
protein S17 - Leptospirillum sp. Group II UBA
Length = 95
Score = 34.3 bits (75), Expect = 1.5
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 191 GVVQKMKMQRTIV--IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECX 364
GVV KM +T+V I+R LH P Y++ R + H +E+G +V I
Sbjct: 20 GVVVGNKMMKTVVVEIQRRVLH--PLYHKVVSRRTRIKAHTQ---EPIEVGSVVEIISTR 74
Query: 365 PLSKTVRFNVL 397
P+SK VL
Sbjct: 75 PISKDKSHRVL 85
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 34.3 bits (75), Expect = 1.5
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
+ + G V KMQ ++V+ D L + YNR+ KR H IGD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEK--DSCNIGDRVKLDP 59
Query: 359 CXPLSK 376
PLSK
Sbjct: 60 SRPLSK 65
>UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52;
Bacteria|Rep: 30S ribosomal protein S17 - Xylella
fastidiosa
Length = 89
Score = 34.3 bits (75), Expect = 1.5
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +2
Query: 167 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 346
+I+GR+++ +QK T+++ R H L Y ++ KR + H + + GD+V
Sbjct: 13 TIKGRVISNKMQKTV---TVLVERQIKHAL--YGKYIKRSTKLHAHDADDLCNE--GDVV 65
Query: 347 TIGECXPLSKTVRFNVL 397
+ E P+SKT + V+
Sbjct: 66 LMTEVAPISKTKNWRVV 82
>UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 - Mycoplasma
pneumoniae
Length = 85
Score = 34.3 bits (75), Expect = 1.5
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
++L G+V+ K +T ++ + P Y++ RH+ H + GD V I E
Sbjct: 7 KVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVL-AKDGDKVQIVE 65
Query: 359 CXPLSKTVRFNV 394
PLS T RF +
Sbjct: 66 TRPLSATKRFRI 77
>UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2;
Bacteroides thetaiotaomicron|Rep: 30S ribosomal protein
S17 2 - Bacteroides thetaiotaomicron
Length = 98
Score = 34.3 bits (75), Expect = 1.5
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 185 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECX 364
+ G+V KMQ+T+VI + PKY + + + +H P + +GD V E
Sbjct: 26 IEGIVVSTKMQKTVVIEVERTKKHPKYGKTVQYTKKYKIH-DP-LEECSVGDRVLAHETR 83
Query: 365 PLSKTVRF 388
SKT F
Sbjct: 84 HFSKTKYF 91
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 33.9 bits (74), Expect = 1.9
Identities = 23/97 (23%), Positives = 38/97 (39%)
Frame = +2
Query: 41 RKGGMKRKDMRHHKNVGLGFKTPRQAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQR 220
R G +R+D + H N G R+ + GT+ K TG S G +TG +
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTGTHGSTETCH 98
Query: 221 TIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 331
++ + + + RHR+ H + D E
Sbjct: 99 MDAQQQGNARHRDAQQQGKARHRDPGQHGNTYHMDAE 135
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 33.9 bits (74), Expect = 1.9
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 173 RGR-ILTGVVQKM--KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 343
RGR GVV ++ K ++I +R Y+P + HR+ H + GD+
Sbjct: 9 RGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDE--MMACQEGDV 66
Query: 344 VTIGECXPLSKTVRFNV 394
V I +C P+SKT F V
Sbjct: 67 VRIEQCRPISKTKHFAV 83
>UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 306.t00001 - Entamoeba histolytica HM-1:IMSS
Length = 499
Score = 33.5 bits (73), Expect = 2.6
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +2
Query: 134 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY----LPKYNRFEKRHRNMSV 301
+ K C F ++ ++ +I++ +V K+ M ++RR Y + K+ K N
Sbjct: 315 LGKYCYFKDDILLQPQIISAIVSKLSMTDKTILRRGYWMLSNISVSKFPETTKAIINSGA 374
Query: 302 HLSPCFRDVEIGDIVTIGE-CXPLSKTV 382
LS C +E D+ E C L+ T+
Sbjct: 375 FLSSCCTILETNDVKIKSEACWLLANTI 402
>UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3;
Rhodobacteraceae|Rep: 30S ribosomal protein S17 -
Oceanicola batsensis HTCC2597
Length = 109
Score = 33.5 bits (73), Expect = 2.6
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVI--RRDYLH-YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
RIL GVV +T+ + R + H L K R K++R F+ GDIV
Sbjct: 4 RILRGVVTSDANAQTVTVSVERRFTHPVLQKTIRKSKKYRAHDA--DNAFKK---GDIVR 58
Query: 350 IGECXPLSKTVRFNVL 397
I EC P SKT R+ V+
Sbjct: 59 IQECAPKSKTKRWEVM 74
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.5 bits (73), Expect = 2.6
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 230 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase); n=2;
Sulfolobus|Rep: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase) - Sulfolobus
solfataricus
Length = 378
Score = 33.5 bits (73), Expect = 2.6
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +2
Query: 29 VFLNRKGGMKRKDMRHHKNVGLGFKTPRQAIEGTYIDK----KCPFTGNV-SIRGRILTG 193
+F+ + G ++ D +K++ + PR + T++++ KCP G + SI G + G
Sbjct: 221 LFVRVENGARKADDNINKHLKYFGECPRCGFQ-TFVEENCKTKCPVCGEIFSIIGPLYIG 279
Query: 194 VVQKMKMQRTIVIRRDYLHYLPKYNRFEK 280
+ M+ + I+ +YL +NR +K
Sbjct: 280 PLYSMEFLKRIMDLYSNFNYLTSFNRIQK 308
>UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22;
Bacteria|Rep: 30S ribosomal protein S17 - Mycobacterium
bovis
Length = 135
Score = 33.5 bits (73), Expect = 2.6
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = +2
Query: 140 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 319
K P T R + G V KMQ+TIV+ + P Y + + + + H
Sbjct: 45 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 104
Query: 320 RDVEIGDIVTIGECXPLSKTVRFNVL 397
IGD V++ E PLS T R+ ++
Sbjct: 105 --AGIGDRVSLMETRPLSATKRWRLV 128
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 33.5 bits (73), Expect = 2.6
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 173 RGRIL--TGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 346
RGR + G V KM +TI + + KY ++ K+ H +IGDIV
Sbjct: 7 RGRKIEVVGEVISDKMDKTISVLIYRMVKHAKYGKYVKKTSVFKAHDEK--NQAKIGDIV 64
Query: 347 TIGECXPLSKTVRF 388
I E PLSKT R+
Sbjct: 65 KIRETRPLSKTKRW 78
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 33.5 bits (73), Expect = 2.6
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 352
R L G V KMQ T+ ++ R H L Y + R H+ GD+V I
Sbjct: 10 RALVGRVVSDKMQNTVTVLVERRVKHEL--YGKVITRSAKYHAHVED--GGAAAGDLVEI 65
Query: 353 GECXPLSKTVRFNV 394
EC P+SKT + V
Sbjct: 66 EECRPISKTKSWRV 79
>UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Bartonella henselae (Rochalimaea henselae)
Length = 79
Score = 32.7 bits (71), Expect = 4.5
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
R+L GVV K +T+V++ + + P + ++ + H +IGD + I E
Sbjct: 4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYKAHDES--NQFKIGDQIFIQE 61
Query: 359 CXPLSKTVRFNVL 397
P+SK R+ V+
Sbjct: 62 SKPISKDKRWIVV 74
>UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin
CG33103-PB, isoform B isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Papilin CG33103-PB,
isoform B isoform 1 - Apis mellifera
Length = 2807
Score = 31.9 bits (69), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 245 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPL 370
L+ +P+ RF RH+ M + +PC +VE D+ G+C P+
Sbjct: 140 LNCMPRGERFFYRHKLMVIDGTPC--EVEKNDVCVGGKCMPV 179
>UniRef50_Q9VHN4 Cluster: CG8043-PA; n=3; Sophophora|Rep: CG8043-PA
- Drosophila melanogaster (Fruit fly)
Length = 348
Score = 31.9 bits (69), Expect = 7.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 307 QMHGHIPVPFLEPIVFG*VVKVIAADHDSSLHLHFLNDAG 188
++HG VPFL+ + V ++ + +S++ HFLN AG
Sbjct: 50 RVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAG 89
>UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1;
Drosophila nasutoides|Rep: Putative H3K9
methyltransferase - Drosophila nasutoides
Length = 640
Score = 31.9 bits (69), Expect = 7.8
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 173 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 352
RGRI V+++++MQR+ +RR L L K+ + H N SP R V D+ +I
Sbjct: 336 RGRIEERVLRRLQMQRSCHLRRKQLQKLAKF----EAHMNTVEQPSPPIRVVNDSDLDSI 391
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 31.9 bits (69), Expect = 7.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 191 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPL 370
G+V M +T +R + P ++ +++N V + +GD VTI C P
Sbjct: 7 GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYMVQDD---LNCNVGDAVTIQPCRPR 63
Query: 371 SKTVRFNVL 397
S T RF ++
Sbjct: 64 SATKRFEII 72
>UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144;
Bacteria|Rep: 30S ribosomal protein S17 - Burkholderia
mallei (Pseudomonas mallei)
Length = 90
Score = 31.9 bits (69), Expect = 7.8
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 179 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 358
R L G V KM +T+ + ++ P Y ++ R + H GD+V I E
Sbjct: 11 RTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEA--NTYNEGDLVEIQE 68
Query: 359 CXPLSKT 379
P+SKT
Sbjct: 69 TRPVSKT 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,125,429
Number of Sequences: 1657284
Number of extensions: 8539603
Number of successful extensions: 20401
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 19875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20349
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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