Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31394
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 175 2e-44
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 100 1e-21
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 100 1e-21
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 38 0.006
U64608-4|AAB04595.2| 282|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 29 2.7
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 29 2.7
Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical pr... 28 6.3
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 6.3
U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 175 bits (427), Expect = 2e-44
Identities = 97/242 (40%), Positives = 132/242 (54%), Gaps = 3/242 (1%)
Frame = +3
Query: 30 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGS 209
A A+ G+K GL +WRI F VP+ G+FY GD+YI L D WD+HFWLG
Sbjct: 9 ALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG---CWDVHFWLGK 65
Query: 210 RTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFS 389
S DE G AAI TV +DD G QHRE+Q YES FL YF IRY+ GG+ SG+
Sbjct: 66 NASTDEIGVAAIKTVEIDDS-LGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGYR 124
Query: 390 HVTIN-EGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 566
HV + + LF KGKRNVR +V+ SLN GD FILD+ ++V++ ++ +E
Sbjct: 125 HVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPPESGRLE 184
Query: 567 RMKAITVANQIKDQDHNGRADIEVVDSEA--HDGIFDRFFDALGSGNKEAIADAEKGGDD 740
R+K + A I D + G + ++D +D F +F G ++ KG DD
Sbjct: 185 RIKGMARAKNIADHERMGIPKVHILDDVEWDNDSTFWSYF-----GGVSSVRKVSKGKDD 239
Query: 741 QE 746
+
Sbjct: 240 DD 241
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 480 ESLNNGDCFILD-VDHQIFVFVGEKAKGVERMKAITVANQIKDQDH 614
E L+ D FILD ++ IFV++G + ER KA+ Q H
Sbjct: 277 EQLDPKDAFILDAINGGIFVWIGHECTLEERSKALIWGQNYLKQHH 322
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I homolog
protein.
Length = 1257
Score = 100 bits (239), Expect = 1e-21
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Frame = +3
Query: 39 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 215
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 216 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 392
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 393 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 566
T RL++ + G V ++ V + ESL+ CF+LD I+++ G K++
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITV 679
Query: 567 RMKAITVANQIKDQDHNGRADIE 635
KA A ++ +D G+++IE
Sbjct: 680 SNKARLFAERLNKRDRKGKSEIE 702
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 60 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 152
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 100 bits (239), Expect = 1e-21
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Frame = +3
Query: 39 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 215
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 216 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 392
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 393 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 566
T RL++ + G V ++ V + ESL+ CF+LD I+++ G K++
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITV 679
Query: 567 RMKAITVANQIKDQDHNGRADIE 635
KA A ++ +D G+++IE
Sbjct: 680 SNKARLFAERLNKRDRKGKSEIE 702
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 60 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 152
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +3
Query: 264 DEQFQGSAVQHREVQYY---ESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQI 434
DE+ + AV+ E + E E LE AI ++G S ++ + L Q+
Sbjct: 165 DERIRLDAVKIDEEAFAVVEEEPEKLETQEQAIAAIQGAKQLLKSPTKVSPYPDVMLIQV 224
Query: 435 KGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQI 599
+G +NV V+ V P S++ CF++ + + G + +E+ KA + +I
Sbjct: 225 RGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKASQLCIEI 279
>U64608-4|AAB04595.2| 282|Caenorhabditis elegans Hypothetical
protein T22B7.3 protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 555 KGVERMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDRFF---DALGSGNKEAIA 716
+GV R KA+ +Q+K+ N A +EV++S + + D F A+ GNK +A
Sbjct: 39 RGVNREKALKQWDQLKNTIENSGAKVEVMESTGAESLPDIVFAANAAIIKGNKAYLA 95
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +1
Query: 613 TMEGPISKWLTPKRTMESSTGSSMPSAPATRRPSLMPKKGATIKSLNASSR 765
T P+ + L+P SSTG+S P+ P RP PKK T A R
Sbjct: 663 TASEPVQE-LSPTPEASSSTGTSAPARPPPARPE-APKKDETAVDAAAPPR 711
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 553 AFSPTKTKI*WSTSKMKQSPLFKDSNVGFTCLTRTFLLPLIWKS 422
+F P+ +K+ WS K+K S L K ++ T L T L L KS
Sbjct: 820 SFMPSSSKLSWSNLKVKASRLSKSKSIDTTHLDVTRLHALSKKS 863
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 94 SPFRRLSSVSSTPGTPTLY*TP 159
SP +R SSV + PGTP +Y P
Sbjct: 105 SPRKRFSSVETNPGTPRIYLPP 126
>Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical
protein ZC374.2 protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 260 GRRTIPGISGTAPRGPILRVQG--VPRIFLTSHPLFKRRTRLRLQP 391
G +P S AP GPI+ G VP + T++ + +L+ QP
Sbjct: 167 GHHQVPAQSPIAPAGPIVNTPGSLVPPLHFTANIMNPTTVQLKWQP 212
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 28.3 bits (60), Expect = 6.3
Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 14/167 (8%)
Frame = +1
Query: 19 KYTKHSRMPAGSRVSKYGGLRTSNRSPFRRLSSVSSTPG--TPTLY*TPQAIRTV*H--G 186
K T HS + R + R+ ++SP RR S S G TP + ++ T G
Sbjct: 286 KSTSHSTSLSKRRYLRSRS-RSLSKSPARRRSRHLSRSGSRTPAQRHSRRSESTSRRRSG 344
Query: 187 TSISGSARGPARTKPARRPSSR-------*TWTTNNSRDQRYSTERSNIT---SPRSS*N 336
+R P R +P RR SR WT SR + + S +T SP S +
Sbjct: 345 RHSRSRSRSPPRKRPVRRSRSRSRSRTPNRNWTRARSRTRSQAKSSSTLTWPLSPSRSRS 404
Query: 337 ISHQPSAI*KADTPQASAT*RSMREQRNDSSRSRVKETSALSR*NRH 477
S++ + K D + + R+ + S + R K + SR RH
Sbjct: 405 NSNERNLKEKKDRKKKKS--EKKRKHHSKSRKHRSKRSE--SREERH 447
>U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical
protein F35H12.4 protein.
Length = 666
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 116 RSLLLRGLLHCTEHHRR 166
+SLLLRGL+ +HHRR
Sbjct: 579 KSLLLRGLMAARKHHRR 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,575,344
Number of Sequences: 27780
Number of extensions: 381702
Number of successful extensions: 1248
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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